DR403359

Overview
NameDR403359
Unique NameDR403359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length136
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:266..401. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_CLOBB (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=metK PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.927e-13
Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQISDA LDA L +DP + VACETCT T +V
Sbjct:    6 TSESVTEGHPDKMCDQISDAILDAILTKDPNARVACETCTTTGLV 50          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK5_CAEEL (Probable S-adenosylmethionine synthetase 5 OS=Caenorhabditis elegans GN=sams-5 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 7.927e-13
Identity = 32/45 (71.11%), Postives = 39/45 (86.67%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDK+CDQISDA LDA L QDP ++VACET TKT ++
Sbjct:    9 TSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMI 53          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK4_CAEEL (Probable S-adenosylmethionine synthetase 4 OS=Caenorhabditis elegans GN=sams-4 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.927e-13
Identity = 32/45 (71.11%), Postives = 39/45 (86.67%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDK+CDQISDA LDA L QDP ++VACET TKT ++
Sbjct:    9 TSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMI 53          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK3_CAEEL (Probable S-adenosylmethionine synthetase 3 OS=Caenorhabditis elegans GN=sams-3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.927e-13
Identity = 32/45 (71.11%), Postives = 39/45 (86.67%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDK+CDQISDA LDA L QDP ++VACET TKT ++
Sbjct:    9 TSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMI 53          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_ASCIM (S-adenosylmethionine synthetase OS=Ascobolus immersus PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.035e-12
Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+ DQ+SDA LDACL +DP S+VACET TKT ++
Sbjct:   17 TSESVGEGHPDKIADQVSDAVLDACLAEDPLSKVACETATKTGMI 61          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK2_PONAB (S-adenosylmethionine synthetase isoform type-2 OS=Pongo abelii GN=MAT2A PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.035e-12
Identity = 31/45 (68.89%), Postives = 39/45 (86.67%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQISDA LDA L+QDP+++VACET  KT ++
Sbjct:   21 TSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMI 65          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK2_MOUSE (S-adenosylmethionine synthetase isoform type-2 OS=Mus musculus GN=Mat2a PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.035e-12
Identity = 31/45 (68.89%), Postives = 39/45 (86.67%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQISDA LDA L+QDP+++VACET  KT ++
Sbjct:   21 TSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMI 65          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK2_MACFA (S-adenosylmethionine synthetase isoform type-2 OS=Macaca fascicularis GN=MAT2A PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.035e-12
Identity = 31/45 (68.89%), Postives = 39/45 (86.67%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQISDA LDA L+QDP+++VACET  KT ++
Sbjct:   21 TSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMI 65          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK2_HUMAN (S-adenosylmethionine synthetase isoform type-2 OS=Homo sapiens GN=MAT2A PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.035e-12
Identity = 31/45 (68.89%), Postives = 39/45 (86.67%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQISDA LDA L+QDP+++VACET  KT ++
Sbjct:   21 TSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMI 65          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_NEUCR (S-adenosylmethionine synthetase OS=Neurospora crassa GN=eth-1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.352e-12
Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+ DQ+SDA LDACL +DP S+VACET TKT ++
Sbjct:   20 TSESVGEGHPDKIADQVSDAILDACLAEDPLSKVACETATKTGMI 64          
The following BLAST results are available for this feature:
BLAST of DR403359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 290
Match NameE-valueIdentityDescription
METK_CLOBB7.927e-1371.11S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK5_CAEEL7.927e-1371.11Probable S-adenosylmethionine synthetase 5 OS=Caen... [more]
METK4_CAEEL7.927e-1371.11Probable S-adenosylmethionine synthetase 4 OS=Caen... [more]
METK3_CAEEL7.927e-1371.11Probable S-adenosylmethionine synthetase 3 OS=Caen... [more]
METK_ASCIM1.035e-1268.89S-adenosylmethionine synthetase OS=Ascobolus immer... [more]
METK2_PONAB1.035e-1268.89S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MOUSE1.035e-1268.89S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MACFA1.035e-1268.89S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_HUMAN1.035e-1268.89S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK_NEUCR1.352e-1268.89S-adenosylmethionine synthetase OS=Neurospora cras... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244L16 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244L16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403359 ID=DR403359; Name=DR403359; organism=Citrus sinensis; type=EST; length=136bp
ACCTCTGAATCTGTGAACCAGGGTCACCCCGACAAGTTGTGCGACCAGAT
CTCTGATGCCGCGCTTGATGCCTGCCTTGAGCAGGATCCTGAAAGCGAGG
TTGCCTGTGAGACATGCACCAAGACCAACGTGGTCA
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