DR403354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_PELHO (Photosystem II reaction center protein H OS=Pelargonium hortorum GN=psbH PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.678e-28 Identity = 61/73 (83.56%), Postives = 67/73 (91.78%), Query Frame = 1 Query: 52 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 MATQ+VE SSR+ P+RT+ G LLKPLNSEYGKVAPGWGTTPLMGVAMALFA+FLSII EIYNSSVLLDGI +N Sbjct: 1 MATQSVEDSSRSGPRRTNVGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAIFLSIILEIYNSSVLLDGILMN 73
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_PEA (Photosystem II reaction center protein H OS=Pisum sativum GN=psbH PE=3 SV=3) HSP 1 Score: 123.25 bits (308), Expect = 1.003e-27 Identity = 61/73 (83.56%), Postives = 67/73 (91.78%), Query Frame = 1 Query: 52 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 MATQTVE SSR+ P+RT+ G LLKPLNSEYGKVAPGWGTTPLMG+AMALFAVFLSII EIYNSS+LLD IS+N Sbjct: 1 MATQTVENSSRSGPRRTAVGDLLKPLNSEYGKVAPGWGTTPLMGIAMALFAVFLSIILEIYNSSLLLDQISMN 73
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_ORYSJ (Photosystem II reaction center protein H OS=Oryza sativa subsp. japonica GN=psbH PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.977e-27 Identity = 61/73 (83.56%), Postives = 64/73 (87.67%), Query Frame = 1 Query: 52 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 MATQTVE SSR P++T G LLKPLNSEYGKVAPGWGTTP MGVAMALFAVFLSII EIYNSSVLLDGI +N Sbjct: 1 MATQTVEDSSRPGPRQTRVGNLLKPLNSEYGKVAPGWGTTPFMGVAMALFAVFLSIILEIYNSSVLLDGILMN 73
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_ORYSI (Photosystem II reaction center protein H OS=Oryza sativa subsp. indica GN=psbH PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.977e-27 Identity = 61/73 (83.56%), Postives = 64/73 (87.67%), Query Frame = 1 Query: 52 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 MATQTVE SSR P++T G LLKPLNSEYGKVAPGWGTTP MGVAMALFAVFLSII EIYNSSVLLDGI +N Sbjct: 1 MATQTVEDSSRPGPRQTRVGNLLKPLNSEYGKVAPGWGTTPFMGVAMALFAVFLSIILEIYNSSVLLDGILMN 73
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_ORYSA (Photosystem II reaction center protein H OS=Oryza sativa GN=psbH PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.977e-27 Identity = 61/73 (83.56%), Postives = 64/73 (87.67%), Query Frame = 1 Query: 52 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 MATQTVE SSR P++T G LLKPLNSEYGKVAPGWGTTP MGVAMALFAVFLSII EIYNSSVLLDGI +N Sbjct: 1 MATQTVEDSSRPGPRQTRVGNLLKPLNSEYGKVAPGWGTTPFMGVAMALFAVFLSIILEIYNSSVLLDGILMN 73
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_ORYNI (Photosystem II reaction center protein H OS=Oryza nivara GN=psbH PE=3 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 4.977e-27 Identity = 61/73 (83.56%), Postives = 64/73 (87.67%), Query Frame = 1 Query: 52 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 MATQTVE SSR P++T G LLKPLNSEYGKVAPGWGTTP MGVAMALFAVFLSII EIYNSSVLLDGI +N Sbjct: 1 MATQTVEDSSRPGPRQTRVGNLLKPLNSEYGKVAPGWGTTPFMGVAMALFAVFLSIILEIYNSSVLLDGILMN 73
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_PIPCE (Photosystem II reaction center protein H OS=Piper cenocladum GN=psbH PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.109e-26 Identity = 60/70 (85.71%), Postives = 64/70 (91.43%), Query Frame = 1 Query: 52 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGI 261 MATQTVE SS++ P+RT G LLKPLNSEYGKVAPGWGTTPLMGVAMALFA+FLSII EIYNSSVLLDGI Sbjct: 1 MATQTVEDSSKSGPRRTVIGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAIFLSIILEIYNSSVLLDGI 70
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_AMBTC (Photosystem II reaction center protein H OS=Amborella trichopoda GN=psbH PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.891e-26 Identity = 59/73 (80.82%), Postives = 65/73 (89.04%), Query Frame = 1 Query: 52 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 M TQ+VE SSR+ P+RT G LLKPLNSEYGKVAPGWGTTP MGVAMALFA+FLSII EIYNSSVLLDGIS++ Sbjct: 1 MVTQSVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPFMGVAMALFAIFLSIILEIYNSSVLLDGISVS 73
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_CUCSA (Photosystem II reaction center protein H OS=Cucumis sativus GN=psbH PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.470e-26 Identity = 58/73 (79.45%), Postives = 65/73 (89.04%), Query Frame = 1 Query: 52 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 MATQTV+ SS++ P+RT G LLKPLNSEYGKVAPGWGTTPLMGVAM+LFA+FL II EIYNSS+LLDGIS N Sbjct: 1 MATQTVDDSSKSGPRRTVVGDLLKPLNSEYGKVAPGWGTTPLMGVAMSLFAIFLCIILEIYNSSILLDGISSN 73
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_PINTH (Photosystem II reaction center protein H OS=Pinus thunbergii GN=psbH PE=3 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.038e-24 Identity = 56/73 (76.71%), Postives = 62/73 (84.93%), Query Frame = 1 Query: 52 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 MATQT++ +S+ PK T G LKPLNSEYGKVAPGWGTTPLMG AMALFAVFLSII EIYNSSVLLDGI ++ Sbjct: 1 MATQTIDDTSKTTPKETLVGTTLKPLNSEYGKVAPGWGTTPLMGFAMALFAVFLSIILEIYNSSVLLDGIPVS 73 The following BLAST results are available for this feature:
BLAST of DR403354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403354 ID=DR403354; Name=DR403354; organism=Citrus sinensis; type=EST; length=610bpback to top |