DR403354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_ADICA (Photosystem II reaction center protein H OS=Adiantum capillus-veneris GN=psbH PE=2 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 1.551e-20 Identity = 48/73 (65.75%), Postives = 60/73 (82.19%), Query Frame = 1 Query: 52 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 MAT+ ++ + + +PK + G +LKPLNSEYGKVAPGWGTTPLMG MALFA+FL I EIYNSSVLLDGI+++ Sbjct: 1 MATKVLDETPKGKPKISFLGMVLKPLNSEYGKVAPGWGTTPLMGFFMALFAIFLVTILEIYNSSVLLDGIAIS 73
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_HUPLU (Photosystem II reaction center protein H OS=Huperzia lucidula GN=psbH PE=3 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 4.512e-20 Identity = 50/73 (68.49%), Postives = 56/73 (76.71%), Query Frame = 1 Query: 52 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 MATQ + S R + K T G LKPLNSEYGKVAPGWGTTP+MGVAMA FAVF II E+YNSSV LDGI ++ Sbjct: 1 MATQISDISRRTKVKSTGLGNALKPLNSEYGKVAPGWGTTPIMGVAMASFAVFSVIILELYNSSVSLDGIPVS 73
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_SPIMX (Photosystem II reaction center protein H OS=Spirogyra maxima GN=psbH PE=3 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 5.892e-20 Identity = 51/77 (66.23%), Postives = 59/77 (76.62%), Query Frame = 1 Query: 52 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN*NEI 282 MAT+ + K+TS G +LKPLNSEYGKVAPGWGTT LMGV MALFAVFL II EIYN+SVLLDGI ++ N + Sbjct: 1 MATKINDDILSTPGKKTSVGDILKPLNSEYGKVAPGWGTTVLMGVFMALFAVFLVIILEIYNASVLLDGIPVSWNSL 77
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_STAPU (Photosystem II reaction center protein H OS=Staurastrum punctulatum GN=psbH PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.714e-19 Identity = 48/73 (65.75%), Postives = 62/73 (84.93%), Query Frame = 1 Query: 52 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 MATQ ++ ++ ++ +RT+ G +LKPLNSEYGKVAPGWGTT LMGV MALFAVFL II E+YN+SV+LDGI ++ Sbjct: 1 MATQIIKDAN-SKGRRTALGDILKPLNSEYGKVAPGWGTTVLMGVFMALFAVFLVIILELYNASVVLDGIPVS 72
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_MESVI (Photosystem II reaction center protein H OS=Mesostigma viride GN=psbH PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.515e-19 Identity = 48/65 (73.85%), Postives = 52/65 (80.00%), Query Frame = 1 Query: 94 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN*NEIYK 288 KRT G LKPLNSEYGKVAPGWGTT LMGV MALFAVFL II +IYN+SVLLDGI N + + K Sbjct: 8 KRTVVGNFLKPLNSEYGKVAPGWGTTVLMGVFMALFAVFLVIILQIYNASVLLDGIPANWSSLSK 72
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_KLEBI (Photosystem II reaction center protein H OS=Klebsormidium bilatum GN=psbH PE=3 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 9.407e-18 Identity = 44/73 (60.27%), Postives = 56/73 (76.71%), Query Frame = 1 Query: 52 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 MAT+T++ + + +LKPLN+EYGKVAPGWGTT LMGV MALFAVFL II E+YN+SVLLDG+ ++ Sbjct: 1 MATKTLDQDPNKQRPGAAVSSVLKPLNAEYGKVAPGWGTTVLMGVFMALFAVFLVIILELYNASVLLDGVPVS 73
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_SYNR3 (Photosystem II reaction center protein H OS=Synechococcus sp. (strain RCC307) GN=psbH PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.605e-17 Identity = 41/61 (67.21%), Postives = 51/61 (83.61%), Query Frame = 1 Query: 94 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN*N 276 +RT G LL+PLNSEYGKV PGWGTTP+MG+ MALF VFL +I ++YN S+LLDGI++N N Sbjct: 3 QRTRLGDLLRPLNSEYGKVVPGWGTTPVMGIFMALFLVFLLVILQLYNRSLLLDGITVNWN 63
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_CHLVU (Photosystem II reaction center protein H OS=Chlorella vulgaris GN=psbH PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.605e-17 Identity = 45/63 (71.43%), Postives = 51/63 (80.95%), Query Frame = 1 Query: 100 TSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN*NEIYK 288 T G LLKPLNSEYGKVAPGWGTT LMG+ MALFAVFL II EIYNSSVLLD ++++ + K Sbjct: 18 TPLGTLLKPLNSEYGKVAPGWGTTVLMGIFMALFAVFLVIILEIYNSSVLLDDVTMSWESLSK 80
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_SYNP2 (Photosystem II reaction center protein H OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=psbH PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.096e-17 Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 1 Query: 94 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 +RT G +LKPLNSEYGKVAPGWGTTPLMGV MALF VFL II +IYNSS++L+G ++ Sbjct: 3 QRTRLGDILKPLNSEYGKVAPGWGTTPLMGVFMALFLVFLLIILQIYNSSLILEGFEVD 61
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_SYNS3 (Photosystem II reaction center protein H OS=Synechococcus sp. (strain CC9311) GN=psbH PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.669e-17 Identity = 40/61 (65.57%), Postives = 51/61 (83.61%), Query Frame = 1 Query: 94 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN*N 276 +RT G LL+PLNSEYGKV PGWGTTP+MG+ MALF VFL II ++YN S++L+GI++N N Sbjct: 3 QRTRLGDLLRPLNSEYGKVVPGWGTTPVMGIFMALFLVFLLIILQLYNKSLILEGINVNWN 63 The following BLAST results are available for this feature:
BLAST of DR403354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR403354 ID=DR403354; Name=DR403354; organism=Citrus sinensis; type=EST; length=610bpback to top |