DR403354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_PSEAK (Photosystem II reaction center protein H OS=Pseudendoclonium akinetum GN=psbH PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.098e-17 Identity = 48/79 (60.76%), Postives = 58/79 (73.42%), Query Frame = 1 Query: 52 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN*NEIYK 288 MAT+T + S+ T+ G LL+PLNSEYGKVAPGWGT LMGV MALFAVFL II EIYNSSV+LD + ++ + K Sbjct: 1 MATKTSK-STDDLGMTTALGTLLRPLNSEYGKVAPGWGTATLMGVFMALFAVFLVIILEIYNSSVILDDVQMSWQSLAK 78
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_THEEB (Photosystem II reaction center protein H OS=Thermosynechococcus elongatus (strain BP-1) GN=psbH PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.040e-16 Identity = 40/59 (67.80%), Postives = 50/59 (84.75%), Query Frame = 1 Query: 94 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 +RT G +L+PLNSEYGKVAPGWGTTPLM V M LF VFL II EIYNS+++LDG++++ Sbjct: 3 RRTWLGDILRPLNSEYGKVAPGWGTTPLMAVFMGLFLVFLLIILEIYNSTLILDGVNVS 61
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_SYNY3 (Photosystem II reaction center protein H OS=Synechocystis sp. (strain PCC 6803) GN=psbH PE=3 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 1.040e-16 Identity = 40/59 (67.80%), Postives = 50/59 (84.75%), Query Frame = 1 Query: 94 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 +RT G +L+PLNSEYGKV PGWGTTP+MGV MALF VFL II +IYNSS++L+G S++ Sbjct: 3 QRTRLGDILRPLNSEYGKVVPGWGTTPVMGVFMALFLVFLLIILQIYNSSLILEGFSVD 61
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_NEPOL (Photosystem II reaction center protein H OS=Nephroselmis olivacea GN=psbH PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.040e-16 Identity = 42/59 (71.19%), Postives = 49/59 (83.05%), Query Frame = 1 Query: 94 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 K T G LKPLNSEYGKVAPGWGTTP+MG+ MALFAVFL II EIYNSS++LD + ++ Sbjct: 17 KITPLGTALKPLNSEYGKVAPGWGTTPVMGLFMALFAVFLLIILEIYNSSLILDDVGVS 75
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_CYAPA (Photosystem II reaction center protein H OS=Cyanophora paradoxa GN=psbH PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.040e-16 Identity = 40/60 (66.67%), Postives = 50/60 (83.33%), Query Frame = 1 Query: 91 PKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 P+RT+ G +L+PLNSEYGKVAPGWGTTPLM V M LF VFL II +IYNSS+LL+ + ++ Sbjct: 2 PQRTALGNILRPLNSEYGKVAPGWGTTPLMAVFMLLFFVFLLIIIQIYNSSLLLENVQVS 61
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_SYNJB (Photosystem II reaction center protein H OS=Synechococcus sp. GN=psbH PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.358e-16 Identity = 42/58 (72.41%), Postives = 49/58 (84.48%), Query Frame = 1 Query: 97 RTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 RT G LL+PLNSEYGKVAPGWGTTPLM V MALFAVFL II +IYN S+LL+ I+++ Sbjct: 4 RTRLGDLLRPLNSEYGKVAPGWGTTPLMAVFMALFAVFLLIILQIYNKSLLLEDINVS 61
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_CYAP4 (Photosystem II reaction center protein H OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=psbH PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.358e-16 Identity = 40/59 (67.80%), Postives = 49/59 (83.05%), Query Frame = 1 Query: 94 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 KRT G +LKPLNSEYGKVAPGWGT PLM V M LF VFL II E+YNS+++L+G+++N Sbjct: 3 KRTWLGDVLKPLNSEYGKVAPGWGTAPLMAVFMGLFLVFLLIILELYNSTLMLEGVNVN 61
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_SYNSC (Photosystem II reaction center protein H OS=Synechococcus sp. (strain CC9605) GN=psbH PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.774e-16 Identity = 38/61 (62.30%), Postives = 50/61 (81.97%), Query Frame = 1 Query: 94 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN*N 276 +RT G LL+PLNSEYGKV PGWGTTP+MG+ M LF VFL +I ++YN S++L+GI++N N Sbjct: 3 QRTRLGDLLRPLNSEYGKVVPGWGTTPVMGIFMVLFLVFLLVILQLYNKSLILEGINVNWN 63
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_SYNS9 (Photosystem II reaction center protein H OS=Synechococcus sp. (strain CC9902) GN=psbH PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.774e-16 Identity = 38/61 (62.30%), Postives = 50/61 (81.97%), Query Frame = 1 Query: 94 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN*N 276 +RT G LL+PLNSEYGKV PGWGTTP+MG+ M LF VFL +I ++YN S++L+GI++N N Sbjct: 3 QRTRLGDLLRPLNSEYGKVVPGWGTTPVMGIFMVLFLVFLLVILQLYNKSLILEGINVNWN 63
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_SYNPX (Photosystem II reaction center protein H OS=Synechococcus sp. (strain WH8102) GN=psbH PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.774e-16 Identity = 38/61 (62.30%), Postives = 50/61 (81.97%), Query Frame = 1 Query: 94 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN*N 276 +RT G LL+PLNSEYGKV PGWGTTP+MG+ M LF VFL +I ++YN S++L+GI++N N Sbjct: 3 QRTRLGDLLRPLNSEYGKVVPGWGTTPVMGIFMVLFLVFLLVILQLYNKSLILEGINVNWN 63 The following BLAST results are available for this feature:
BLAST of DR403354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403354 ID=DR403354; Name=DR403354; organism=Citrus sinensis; type=EST; length=610bpback to top |