DR403354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_SYNPW (Photosystem II reaction center protein H OS=Synechococcus sp. (strain WH7803) GN=psbH PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.774e-16 Identity = 38/61 (62.30%), Postives = 50/61 (81.97%), Query Frame = 1 Query: 94 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN*N 276 +RT G LL+PLNSEYGKV PGWGTTP+MG+ M LF VFL +I ++YN S++L+GI++N N Sbjct: 3 QRTRLGDLLRPLNSEYGKVVPGWGTTPVMGIFMVLFLVFLLVILQLYNQSLILEGINVNWN 63
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_CYAP8 (Photosystem II reaction center protein H OS=Cyanothece sp. (strain PCC 8801) GN=psbH PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.774e-16 Identity = 40/58 (68.97%), Postives = 48/58 (82.76%), Query Frame = 1 Query: 94 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISL 267 +RT G LL+PLNSEYGKV PGWGTTPLMGV M LF VFL II +IYNSS++L+G ++ Sbjct: 3 QRTGLGDLLRPLNSEYGKVVPGWGTTPLMGVFMGLFLVFLLIILQIYNSSLILEGFTV 60
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_STIHE (Photosystem II reaction center protein H OS=Stigeoclonium helveticum GN=psbH PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.026e-16 Identity = 42/57 (73.68%), Postives = 48/57 (84.21%), Query Frame = 1 Query: 100 TSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 T G LLKPLNSE GKV PGWGTT LMGV MALFAVFL I+ EIYNSSV+LDG++++ Sbjct: 21 TPLGRLLKPLNSEAGKVLPGWGTTVLMGVFMALFAVFLVILLEIYNSSVILDGVTMS 77
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_OLTVI (Photosystem II reaction center protein H OS=Oltmannsiellopsis viridis GN=psbH PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.026e-16 Identity = 42/57 (73.68%), Postives = 48/57 (84.21%), Query Frame = 1 Query: 100 TSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 T+ G LL+PLNSEYGKVAPGWGTT LMG MALFAVFL II EIYNSSVLL+ + ++ Sbjct: 14 TALGTLLRPLNSEYGKVAPGWGTTVLMGTFMALFAVFLVIILEIYNSSVLLEDVPMS 70
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_CYAA5 (Photosystem II reaction center protein H OS=Cyanothece sp. (strain ATCC 51142) GN=psbH PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.026e-16 Identity = 40/58 (68.97%), Postives = 48/58 (82.76%), Query Frame = 1 Query: 94 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISL 267 +RT G LL+PLNSEYGKV PGWGTTPLMGV M LF VFL II +IYNSS++L+G ++ Sbjct: 3 QRTRLGDLLRPLNSEYGKVVPGWGTTPLMGVFMGLFLVFLLIILQIYNSSLILNGFTV 60
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_SYNJA (Photosystem II reaction center protein H OS=Synechococcus sp. (strain JA-3-3Ab) GN=psbH PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.150e-15 Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = 1 Query: 97 RTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 RT G LL+PLNSEYGKVAPGWGTTPLM V M LF +FL II +IYN S+LL+ I+++ Sbjct: 4 RTKLGDLLRPLNSEYGKVAPGWGTTPLMAVFMVLFGIFLLIILQIYNKSLLLEDINVS 61
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_MICAN (Photosystem II reaction center protein H OS=Microcystis aeruginosa (strain NIES-843) GN=psbH PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.502e-15 Identity = 39/59 (66.10%), Postives = 50/59 (84.75%), Query Frame = 1 Query: 94 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 +RT G +L+PLNSEYGKV+PGWGTT LMGV MALF VFL II +IYNSS++L+G +++ Sbjct: 3 QRTRLGEILRPLNSEYGKVSPGWGTTLLMGVFMALFLVFLLIILQIYNSSLILEGFNVD 61
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_EMIHU (Photosystem II reaction center protein H OS=Emiliania huxleyi GN=psbH PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.502e-15 Identity = 37/58 (63.79%), Postives = 48/58 (82.76%), Query Frame = 1 Query: 97 RTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLDGISLN 270 RT G +L+PLN+EYGKVAPGWGTTP+MGV M LF VFL II +IYNSS++L+ + ++ Sbjct: 4 RTRLGEILRPLNAEYGKVAPGWGTTPVMGVFMGLFLVFLVIILQIYNSSIILENVDVD 61
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_SYNP6 (Photosystem II reaction center protein H OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psbH PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.962e-15 Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = 1 Query: 94 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLD 255 +RT G +L+PLNSEYGKVAPGWGTTP+MGV M LF VFL II +IYNSS++LD Sbjct: 3 QRTRLGDILRPLNSEYGKVAPGWGTTPVMGVFMLLFFVFLLIILQIYNSSLVLD 56
BLAST of DR403354 vs. ExPASy Swiss-Prot
Match: PSBH_SYNE7 (Photosystem II reaction center protein H OS=Synechococcus elongatus (strain PCC 7942) GN=psbH PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.962e-15 Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = 1 Query: 94 KRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSII*EIYNSSVLLD 255 +RT G +L+PLNSEYGKVAPGWGTTP+MGV M LF VFL II +IYNSS++LD Sbjct: 3 QRTRLGDILRPLNSEYGKVAPGWGTTPVMGVFMLLFFVFLLIILQIYNSSLVLD 56 The following BLAST results are available for this feature:
BLAST of DR403354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403354 ID=DR403354; Name=DR403354; organism=Citrus sinensis; type=EST; length=610bpback to top |