DR403348

Overview
NameDR403348
Unique NameDR403348
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13714 contig Csv1_Contig13714:426..1030. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403348 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.469e-15
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 2
Query:  221 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILHISGERSKEQEEKNDKWHRVERSS-----GKFLRRFRLPDNAKVEQVKASMENGVLTV 493
            + A IDW E+  +H+FK ++PG            G +L I GE  KE++++N  WH  ER +      +FLRR  LP+N KV+QVKA +ENGVLTV
Sbjct:   20 STALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTV 115          
BLAST of DR403348 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.275e-15
Identity = 51/125 (40.80%), Postives = 67/125 (53.60%), Query Frame = 2
Query:  137 LDVWDPFDGFLSSALTNAPSSA-----RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILHISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 496
            LDV D   G      T +  SA     R+    A    D KE P A+ F  D+PGL            R+L +SGER +E+ E + K+ R+ER  GKF+R+F LPDNA V++V A   +GVLTVT
Sbjct:   20 LDVPDGDAGAGGDNKTGSGGSATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVT 144          
BLAST of DR403348 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.624e-14
Identity = 41/106 (38.68%), Postives = 63/106 (59.43%), Query Frame = 2
Query:  185 NAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILHISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 496
            NAP+    R+    A    D KE P ++VF  D+PG++            +L ISGER +E+E++  K+ ++ER  GK +R+F LP+NA +E + A  ++GVLTVT
Sbjct:   27 NAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTVT 132          
BLAST of DR403348 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.619e-14
Identity = 40/106 (37.74%), Postives = 65/106 (61.32%), Query Frame = 2
Query:  185 NAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILHISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 496
            + PS A  R+    A    D KE P ++VF  D+PGL+            +L ISG+R++E+E++  K+ R+ER  GKF+++F LP++A  +++ A  ++GVLTVT
Sbjct:   35 SGPSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVT 140          
BLAST of DR403348 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.619e-14
Identity = 45/111 (40.54%), Postives = 66/111 (59.46%), Query Frame = 2
Query:  182 TNAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILHISGERSK----EQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 496
            T  P+ A  R+    A    D K+ P A+ F  D+PGL+           R+L ISGER +    E++E++ K+ R+ER  GKF+R+F LPDNA V+++ A  ++GVLTVT
Sbjct:   36 TGGPTRAYVRDARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVT 146          
BLAST of DR403348 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.173e-14
Identity = 42/115 (36.52%), Postives = 65/115 (56.52%), Query Frame = 2
Query:  158 DGFLSSALTNAP--SSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILHISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 496
            DG   +   NAP  S  R+    A    D KE P ++VF+ D+PGL+            +L I GER +++E++  K+ R+ER  GK +R+F LP+NA  + + A  ++GVL+VT
Sbjct:   25 DGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVT 139          
BLAST of DR403348 vs. ExPASy Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.796e-13
Identity = 45/111 (40.54%), Postives = 64/111 (57.66%), Query Frame = 2
Query:  173 SALTNAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILHISGERSKEQEEKND-KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 496
            S+ ++APS     +    A    D KE P ++VF  D+PGL+            +L ISGER +E EEK   K+ R+ER  GK +R+F LP+NA  E++ A  ++GVLTVT
Sbjct:   25 SSNSSAPSRTFMLDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVT 135          
BLAST of DR403348 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.346e-13
Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 2
Query:  203 RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILHISGERSKEQEEKND--KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 496
            R+    A    D KE P ++VF AD+PG++            +L +SGER++ ++++ D  K+ R+ER  GKF+R+F LP+NA VE + A  ++GVL VT
Sbjct:   48 RDAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDGVLQVT 147          
BLAST of DR403348 vs. ExPASy Swiss-Prot
Match: HSP23_MAIZE (17.0 kDa class II heat shock protein OS=Zea mays GN=HSP18 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.226e-13
Identity = 43/98 (43.88%), Postives = 57/98 (58.16%), Query Frame = 2
Query:  203 RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILHISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 496
            R+    A    D KE   A+ F  D+PGL            R+L ISGER +E+ E + K+ R+ER  GKF+R+F LPDNA V++V A   +GVLTVT
Sbjct:   38 RDARAMAATPADVKELAGAYAFVVDMPGLSTGDIRVQVEDERVLVISGERRREERE-DAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVT 134          
BLAST of DR403348 vs. ExPASy Swiss-Prot
Match: HSP21_MAIZE (17.5 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.226e-13
Identity = 40/87 (45.98%), Postives = 55/87 (63.22%), Query Frame = 2
Query:  236 DWKETPQAHVFKADLPGLRXXXXXXXXXXGRILHISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 496
            D KE P A+ F  D+PGL            R+L ISGER +E+ E + K+ R+ER  GKF+R+F LPDNA ++++ A   +GVLTVT
Sbjct:   56 DVKELPGAYAFVVDMPGLGTGDIKVQVEDERVLVISGERRREERE-DAKYLRMERRMGKFMRKFVLPDNADMDKISAVCRDGVLTVT 141          
The following BLAST results are available for this feature:
BLAST of DR403348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HS157_ARATH1.469e-1543.7515.7 kDa heat shock protein, peroxisomal OS=Arabid... [more]
HSP22_MAIZE4.275e-1540.8017.8 kDa class II heat shock protein OS=Zea mays P... [more]
HSP21_PEA1.624e-1438.6817.1 kDa class II heat shock protein OS=Pisum sati... [more]
HSP21_HELAN3.619e-1437.7417.9 kDa class II heat shock protein OS=Helianthus... [more]
HSP18_ORYSJ3.619e-1440.5418.0 kDa class II heat shock protein OS=Oryza sati... [more]
HSP21_SOYBN6.173e-1436.5217.9 kDa class II heat shock protein OS=Glycine ma... [more]
HSP21_IPONI1.796e-1340.5417.2 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP22_IPONI2.346e-1339.0018.8 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP23_MAIZE5.226e-1343.8817.0 kDa class II heat shock protein OS=Zea mays G... [more]
HSP21_MAIZE5.226e-1345.9817.5 kDa class II heat shock protein OS=Zea mays P... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244K23 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244K23 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403348 ID=DR403348; Name=DR403348; organism=Citrus sinensis; type=EST; length=605bp
AGGGGATCTTCAAATTGACTTGATCAAAGAANNNNCGAAGTTGTTGAGCA
NNNAATTAGCGTCCCAGTTTGCCATAATGTCACTCATTCCAAGCATCTTC
GGTGGCCGAAGAACCAACGTGTTCGATCCAGTTTCATTAGATGTATGGGA
TCCTTTCGACGGGTTCTTGTCCTCTGCCCTTACCAACGCGCCGTCTTCGG
CTAGGGAAACATCCCAATTCGCCAATGCAAGAATTGACTGGAAAGAGACT
CCTCAGGCTCACGTATTCAAAGCTGATCTTCCAGGGCTGAGGAAAGAAGA
AGTAAAAGTTGAGGTTGAAGAGGGCAGGATTCTGCACATAAGCGGAGAGA
GGAGCAAGGAGCAGGAAGAGAAGAATGACAAGTGGCATCGCGTCGAGAGG
AGCAGTGGCAAGTTCCTGAGGAGGTTCAGGTTGCCCGACAATGCTAAGGT
GGAACAGGTTAAGGCCAGCATGGAGAATGGTGTGCTCACAGTCACCGTTC
CTAAACAGGAGGAGAAGAAACCTGAAGTTAAGGCTATTGAGATCTCTGGC
TAAGTGATAACTGTAAATGTTTTCAAGATAGTGTCTTTGGTTTGCTAATA
AATTT
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