DR403327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: KCAB_SCHPO (Putative voltage-gated potassium channel subunit beta OS=Schizosaccharomyces pombe GN=SPCC965.06 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.371e-19 Identity = 75/227 (33.04%), Postives = 112/227 (49.34%), Query Frame = 1 Query: 76 VPRVKLGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKEL--PRENIQVATKFGF---VELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAH-------AVHPITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 717 VP LG GL+VS G G N E + +K A+ GI FDTA+ Y +E ++GKA+KEL R + TK F +L T+ + + +++ ASL+RL + Y+D+ HR D SVP+EE + +L+++GK Y G SE S I AH + P+ A Q +++ RD E +++PL + G G + PL G GK Sbjct: 13 VPFRFLGRSGLKVSAFSLGGWLTYG--NEGYDVEHTKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIKELGWDRSEYVITTKVFFGAGTKLPNTTGLSR---KHIIEGLNASLKRLGLPYVDVIMAHRPDPSVPMEEVVRAFTQLIQDGKAFYWGTSEWSAFEIEHAHHIATKYNLIAPV-ADQPQYNYLTRDHFEKDLLPLQQIYGYGATVWSPLKSGILTGK 233
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: KCAB1_RABIT (Voltage-gated potassium channel subunit beta-1 OS=Oryctolagus cuniculus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.161e-19 Identity = 65/224 (29.02%), Postives = 114/224 (50.89%), Query Frame = 1 Query: 76 VPRVKLGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 717 +P LG GL VS LG G GG +S+E ++ A+ G+ FDTA+ Y E++LG +K+ R ++ + TK + G + +G + +++ + SL+RL +EY+D+ + +R D++ P+EE + M ++ +G Y G S S I A++V P Q E+ L+ R+ +E ++ L ++G+G + + PL G GK Sbjct: 89 MPHRNLGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYW---GGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGK 306
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: KCAB1_HUMAN (Voltage-gated potassium channel subunit beta-1 OS=Homo sapiens GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.161e-19 Identity = 65/224 (29.02%), Postives = 114/224 (50.89%), Query Frame = 1 Query: 76 VPRVKLGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 717 +P LG GL VS LG G GG +S+E ++ A+ G+ FDTA+ Y E++LG +K+ R ++ + TK + G + +G + +++ + SL+RL +EY+D+ + +R D++ P+EE + M ++ +G Y G S S I A++V P Q E+ L+ R+ +E ++ L ++G+G + + PL G GK Sbjct: 89 MPHRNLGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYW---GGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGK 306
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: KCAB1_CHICK (Voltage-gated potassium channel subunit beta-1 OS=Gallus gallus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.161e-19 Identity = 66/219 (30.14%), Postives = 111/219 (50.68%), Query Frame = 1 Query: 91 LGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 717 LG GL VS LG G GG +S+E ++ A+ G+ FDTA+ Y E++LG LK+ R ++ + TK + G + +G + +++ ASL+RL +EY+D+ + +R D + P+EE + M ++ +G Y G S S I A++V P Q E+ L+ R+ +E ++ L ++G+G + + PL G GK Sbjct: 76 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAEQLMTIAYESGVNLFDTAEVYAAGKAEVILGNILKKKGWRRSSLVITTKLYW---GGKAETERGLSRKHIIEGLRASLQRLQLEYVDVVFANRPDNNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNLIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGK 288
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: KCAB2_HUMAN (Voltage-gated potassium channel subunit beta-2 OS=Homo sapiens GN=KCNAB2 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18 Identity = 68/228 (29.82%), Postives = 117/228 (51.32%), Query Frame = 1 Query: 64 KKLQVPRVKLGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV------HPITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 717 ++LQ R LG GL VS LG G GG +++E ++ A+ GI FDTA+ Y E++LG +K+ R ++ + TK + G + +G + +++ +ASL RL +EY+D+ + +R D + P+EET+ M ++ +G Y G S S I A++V P Q E+ ++ R+ +E ++ L ++G+G + + PL G GK Sbjct: 34 RQLQFYR-NLGKSGLRVSCLGLGTWVTFGGQ---ITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFW---GGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGK 254
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: KCAB2_BOVIN (Voltage-gated potassium channel subunit beta-2 OS=Bos taurus GN=KCNAB2 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18 Identity = 68/228 (29.82%), Postives = 117/228 (51.32%), Query Frame = 1 Query: 64 KKLQVPRVKLGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 717 ++LQ R LG GL VS LG G GG +++E ++ A+ GI FDTA+ Y E++LG +K+ R ++ + TK + G + +G + +++ +ASL RL +EY+D+ + +R D + P+EET+ M ++ +G Y G S S I A++V P Q E+ ++ R+ +E ++ L ++G+G + + PL G GK Sbjct: 34 RQLQFYR-NLGKSGLRVSCLGLGTWVTFGGQ---ITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFW---GGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGK 254
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: KCAB2_RAT (Voltage-gated potassium channel subunit beta-2 OS=Rattus norvegicus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.665e-18 Identity = 68/228 (29.82%), Postives = 117/228 (51.32%), Query Frame = 1 Query: 64 KKLQVPRVKLGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 717 ++LQ R LG GL VS LG G GG +++E ++ A+ GI FDTA+ Y E++LG +K+ R ++ + TK + G + +G + +++ +ASL RL +EY+D+ + +R D + P+EET+ M ++ +G Y G S S I A++V P Q E+ ++ R+ +E ++ L ++G+G + + PL G GK Sbjct: 34 RQLQFYR-NLGKSGLRVSCLGLGTWVTFGGQ---ITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFW---GGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGK 254
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: KCAB2_MOUSE (Voltage-gated potassium channel subunit beta-2 OS=Mus musculus GN=Kcnab2 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.665e-18 Identity = 68/228 (29.82%), Postives = 117/228 (51.32%), Query Frame = 1 Query: 64 KKLQVPRVKLGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 717 ++LQ R LG GL VS LG G GG +++E ++ A+ GI FDTA+ Y E++LG +K+ R ++ + TK + G + +G + +++ +ASL RL +EY+D+ + +R D + P+EET+ M ++ +G Y G S S I A++V P Q E+ ++ R+ +E ++ L ++G+G + + PL G GK Sbjct: 34 RQLQFYR-NLGKSGLRVSCLGLGTWVTFGGQ---ITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFW---GGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGK 254
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: KCAB1_RAT (Voltage-gated potassium channel subunit beta-1 OS=Rattus norvegicus GN=Kcnab1 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.481e-18 Identity = 64/219 (29.22%), Postives = 112/219 (51.14%), Query Frame = 1 Query: 91 LGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 717 LG GL VS LG G GG +S+E ++ A+ G+ FDTA+ Y E++LG +K+ R ++ + TK + G + +G + +++ + SL+RL +EY+D+ + +R D++ P+EE + M ++ +G Y G S S I A++V P Q E+ L+ R+ +E ++ L ++G+G + + PL G GK Sbjct: 76 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYW---GGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGK 288
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: KCAB1_MUSPU (Voltage-gated potassium channel subunit beta-1 OS=Mustela putorius GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.481e-18 Identity = 64/219 (29.22%), Postives = 112/219 (51.14%), Query Frame = 1 Query: 91 LGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 717 LG GL VS LG G GG +S+E ++ A+ G+ FDTA+ Y E++LG +K+ R ++ + TK + G + +G + +++ + SL+RL +EY+D+ + +R D++ P+EE + M ++ +G Y G S S I A++V P Q E+ L+ R+ +E ++ L ++G+G + + PL G GK Sbjct: 83 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYW---GGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGK 295 The following BLAST results are available for this feature:
BLAST of DR403327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR403327 ID=DR403327; Name=DR403327; organism=Citrus sinensis; type=EST; length=737bpback to top |