DR403327

Overview
NameDR403327
Unique NameDR403327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: KCAB1_MOUSE (Voltage-gated potassium channel subunit beta-1 OS=Mus musculus GN=Kcnab1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.481e-18
Identity = 64/219 (29.22%), Postives = 112/219 (51.14%), Query Frame = 1
Query:   91 LGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 717
            LG  GL VS LG G     GG    +S+E    ++  A+  G+  FDTA+ Y     E++LG  +K+    R ++ + TK  +   G  +   +G + +++    + SL+RL +EY+D+ + +R D++ P+EE +  M  ++ +G   Y G S  S   I  A++V       P    Q E+ L+ R+ +E ++  L  ++G+G + + PL  G   GK
Sbjct:   76 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYW---GGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGK 288          
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: KCAB1_BOVIN (Voltage-gated potassium channel subunit beta-1 OS=Bos taurus GN=KCNAB1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.481e-18
Identity = 64/219 (29.22%), Postives = 112/219 (51.14%), Query Frame = 1
Query:   91 LGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 717
            LG  GL VS LG G     GG    +S+E    ++  A+  G+  FDTA+ Y     E++LG  +K+    R ++ + TK  +   G  +   +G + +++    + SL+RL +EY+D+ + +R D++ P+EE +  M  ++ +G   Y G S  S   I  A++V       P    Q E+ L+ R+ +E ++  L  ++G+G + + PL  G   GK
Sbjct:   76 LGKSGLRVSCLGLGTWVTFGGQ---ISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYW---GGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGK 288          
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: KCAB2_XENLA (Voltage-gated potassium channel subunit beta-2 OS=Xenopus laevis GN=kcnab2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.546e-18
Identity = 67/228 (29.39%), Postives = 117/228 (51.32%), Query Frame = 1
Query:   64 KKLQVPRVKLGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 717
            ++LQ  R  LG  GL VS LG G     GG    +++E    ++  A+  GI  FDTA+ Y     E++LG  +K+    R ++ + TK  +   G  +   +G + +++    +ASL RL ++Y+D+ + +R D + P+EET+  M  ++ +G   Y G S  S   I  A++V       P    Q E+ ++ R+ +E ++  L  ++G+G + + PL  G   GK
Sbjct:   34 RQLQFYR-NLGKSGLRVSCLGLGTWVTFGGQ---ITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFW---GGKAETERGLSRKHIIEGLKASLERLQLDYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGK 254          
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: AAD_PHACH (Aryl-alcohol dehydrogenase [NADP+] OS=Phanerochaete chrysosporium PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 65/234 (27.78%), Postives = 114/234 (48.72%), Query Frame = 1
Query:   79 PRVKLGTQ-------GLEVSKLGFGCMSLSGGYN----SPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP-RENIQVATKFGFV-ELGFTSVIVKGTPEYVRSCCEA-------SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAH------AVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 702
            P  KLG         GL VS +  G MS+   ++      + +E    ++   ++ G  F DTA+ Y   T+E  +G+ ++    R+ + VATK+  V + G +   +    +YV +  ++       SLR+L   YID++Y H  D +  IEE +  +  LV +GK+ Y+G+S+     + +A+         P    + EW++  RD+E +I+P+C   G+ I P+  L  G
Sbjct:   10 PPTKLGRHRQLAPGCGLHVSPIQLGAMSIGDKWHPYGMGTMDKEASFKLLDAFYNAGGNFIDTANVYQDETSEEFIGEWMEARGNRDQMVVATKYSLVYKRGASFEEIPQKTQYVGNSLKSMHISVHDSLRKLRTSYIDIFYVHFWDYTCTIEEVMNGLHNLVAQGKVLYLGVSDTPAWVVSKANNYARMAGKTPFVIYEGEWNITMRDMERDIIPMCIHEGMAIAPWNVLCAG 243          
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: AAD14_YEAST (Putative aryl-alcohol dehydrogenase AAD14 OS=Saccharomyces cerevisiae GN=AAD14 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17
Identity = 66/233 (28.33%), Postives = 111/233 (47.64%), Query Frame = 1
Query:   82 RVKLGTQGLEVSKLGFGCMSLS---GGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGK--ALKELPRENIQVATKFGF------VELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA------HAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVE 729
            RV   T G+ VS L  G  S+     G+   +++E    ++   +  G    DTA+ Y    +EI +G+  A ++L R+ I +ATKF        V  G ++         +      SLR+L  ++ID+ Y H  D    IEE +  +  LV++GK+ Y+G+S+     +  A      H   P +  Q +W++  RD E +I+P+ R  G+ + P+  +G G F  K  +E
Sbjct:   19 RVLSKTAGIRVSPLILGGASIGDAWSGFMGSMNKEQAFELLDAFYEAGGNCIDTANSYQNEESEIWIGEWMASRKL-RDQIVIATKFTGDYKKYEVGGGKSANYCGNHKRSLHVSVRDSLRKLQTDWIDILYIHWWDYMSSIEEVMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSHGKTPFSVYQGKWNVLNRDFERDIIPMARHFGMALAPWDVMGGGRFQSKKAME 250          
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: KCAB3_XENLA (Voltage-gated potassium channel subunit beta-3 OS=Xenopus laevis GN=kcnab3 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.256e-17
Identity = 67/219 (30.59%), Postives = 109/219 (49.77%), Query Frame = 1
Query:   91 LGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALK--ELPRENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 717
            LG  GL VS LG G     G   S +S+E   +++  A+  G+  FDTA+ Y     E  LGK LK  E  R +  V TK   +  G  +   +G + +++      SL RL ++Y+D+ + +R+D + P+EE +  M  ++ +G   Y G S  S   I  A++V       P    Q E+ L+ R+ +E ++  L  ++G+G + + PL  G   GK
Sbjct:   76 LGKSGLRVSCLGLGTWVTFG---SQISDEVAENLMTVAYEHGVNLFDTAEVYAAGRAERTLGKILKKKEWRRSSYVVTTK---IYWGGQAETERGLSRKHIIEGLRGSLERLQLDYVDIVFANRMDPNSPMEEIVRAMTFVINQGMAMYWGTSRWSAMEIMEAYSVARQFNLIPPVCEQAEYHLFQREKVETQLPELYHKIGVGSMTWSPLACGLITGK 288          
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: STCV_EMENI (Putative sterigmatocystin biosynthesis dehydrogenase stcV OS=Emericella nidulans GN=stcV PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.120e-16
Identity = 65/222 (29.28%), Postives = 101/222 (45.50%), Query Frame = 1
Query:   82 RVKLGTQGLEVSKLGFGCMSLSGGYNSPLSE---EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP-RENIQVATKFGFVELGFTSVIVKGT-----PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP------DTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 702
            RV     G+ VS L  G M   G +   + +   E   +++   +  G  F DTA+ Y    +E  LG+ +     R+ + +ATK+           +K        + +R   EASL +L  +YIDL Y H  D S  +EE +  +  LV  GK+  IG+S+A        +   R H +      Q  W+   RD E EI+P+C+  G+ + P+  LGRG
Sbjct:   17 RVLSPLAGIRVSPLCLGTMHFGGQWTRAMGDVTKETAFALLDRFYEAGGNFIDTANFYQGEGSEKWLGEWVASRGNRDELVLATKYTMSYRLTGPEKIKSNFQGSHSKSLRLSVEASLAKLRTDYIDLLYVHMWDFSTSVEEVMQSLHHLVAAGKVLNIGISDAPAWVVAKCNEYARFHGLTRFCVYQGRWACSYRDFEREILPMCQSEGLALAPWGALGRG 238          
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: YP088_YEAST (Putative aryl-alcohol dehydrogenase YPL088W OS=Saccharomyces cerevisiae GN=YPL088W PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.259e-16
Identity = 67/238 (28.15%), Postives = 113/238 (47.48%), Query Frame = 1
Query:   76 VPRVKLGTQGLEVSKLGFGCMSLSGGYNSPLSEEDG---ISIIKHAFSKGITFFDTADKYGPYTNEILLGKALK--ELPRENIQVATKF-----------------GFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRG 702
            V +V+LG  GL++S +  GCMS      +    ED      I+KH + KG+  FDTAD Y    +E ++ + L+   + RE + + TK                   F EL  ++   +G + +++ +  E S++RL   YIDL   HR+D   P++E +  +  +VE G ++YIG S       A        +      + Q  ++L  R+ E E++P  +   IG++P+ P  RG
Sbjct:    4 VKQVRLGNSGLKISPIVIGCMSYGSKKWADWVIEDKTQIFKIMKHCYDKGLRTFDTADFYSNGLSERIIKEFLEYYSIKRETVVIMTKIYFPVDETLDLHHNFTLNEFEELDLSNQ--RGLSRKHIIAGVENSVKRLGT-YIDLLQIHRLDHETPMKEIMKALNDVVEAGHVRYIGASSMLATEFAELQFTADKYGWFQFISSQSYYNLLYREDERELIPFAKRHNIGLLPWSPNARG 238          
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: AAD4_YEAST (Probable aryl-alcohol dehydrogenase AAD4 OS=Saccharomyces cerevisiae GN=AAD4 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.259e-16
Identity = 56/201 (27.86%), Postives = 98/201 (48.76%), Query Frame = 1
Query:  166 LSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP-RENIQVATKFG-----FVELGFTSVIVKGTPEY-VRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA------HAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVE 729
            +++E    ++   +  G    DTA+ Y    +EI +G+ +K    R+ I +ATKF      +   G  S    G  ++ +      SLR+L  ++ID+ Y H  D    IEE +  +  LV++GK+ Y+G+S+     +  A      H   P +  Q +W++  RD E +I+P+ R  G+ + P+  +G G F  K  +E
Sbjct:    4 MNKEQAFELLDAFYEAGGNCIDTANSYQNEESEIWIGEWMKSRKLRDQIVIATKFTGDYKKYEVGGGKSANYCGNHKHSLHVSVRDSLRKLQTDWIDILYVHWWDYMSSIEEVMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSHGKTPFSIYQGKWNVLNRDFERDIIPMARHFGMALAPWDVMGGGRFQSKKAME 204          
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: Y2320_MYCBO (Uncharacterized oxidoreductase Mb2320 OS=Mycobacterium bovis GN=Mb2320 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15
Identity = 64/213 (30.05%), Postives = 101/213 (47.42%), Query Frame = 1
Query:  109 EVSKLGFGCMSLSG---GYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVES 732
            +VS++G G         GY    +      I+K A + G+T FDTA+ YG   +E +LG+AL +  R  + VA+K            V   P  +++   AS RRL +  I LY  H+ +  VP    +  M+ L++ G I   G+S  S    R+A A    P+ + Q+ +SL   D   ++VP        ++ Y PL +G  GGK  +E+
Sbjct:   11 QVSRIGLGTWQFGSREWGYGDRYATGAARDIVKRARALGVTLFDTAEIYGLGKSERILGEALGD-DRTEVVVASKV---------FPVAPFPAVIKNRERASARRLQLNRIPLYQIHQPNPVVPDSVIMPGMRDLLDSGDIGAAGVSNYSLARWRKADAALGRPVVSNQVHFSLAHPDALEDLVPFAELENRIVIAYSPLAQGLLGGKYGLEN 213          
The following BLAST results are available for this feature:
BLAST of DR403327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
KCAB1_MOUSE3.481e-1829.22Voltage-gated potassium channel subunit beta-1 OS=... [more]
KCAB1_BOVIN3.481e-1829.22Voltage-gated potassium channel subunit beta-1 OS=... [more]
KCAB2_XENLA4.546e-1829.39Voltage-gated potassium channel subunit beta-2 OS=... [more]
AAD_PHACH5.938e-1827.78Aryl-alcohol dehydrogenase [NADP+] OS=Phanerochaet... [more]
AAD14_YEAST1.323e-1728.33Putative aryl-alcohol dehydrogenase AAD14 OS=Sacch... [more]
KCAB3_XENLA2.256e-1730.59Voltage-gated potassium channel subunit beta-3 OS=... [more]
STCV_EMENI1.120e-1629.28Putative sterigmatocystin biosynthesis dehydrogena... [more]
YP088_YEAST7.259e-1628.15Putative aryl-alcohol dehydrogenase YPL088W OS=Sac... [more]
AAD4_YEAST7.259e-1627.86Probable aryl-alcohol dehydrogenase AAD4 OS=Saccha... [more]
Y2320_MYCBO4.705e-1530.05Uncharacterized oxidoreductase Mb2320 OS=Mycobacte... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244J19 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244J19 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403327 ID=DR403327; Name=DR403327; organism=Citrus sinensis; type=EST; length=737bp
GGCCGGGGGAAAGAATACTAAAACAAAGAAACCGAAATNNNNGCTGCAAG
TATGGCAGAAGATAAGAAACTCCAAGTTCCAAGAGTGAAACTTGGAACCC
AAGGCCTTGAGGTTTCAAAGCTGGGGTTTGGATGCATGAGCCTCAGTGGC
GGCTATAATTCTCCACTCTCTGAAGAGGATGGCATCTCAATAATAAAGCA
TGCTTTCAGTAAAGGAATCACTTTCTTTGACACTGCTGATAAATATGGAC
CATATACTAATGAAATTCTTCTTGGAAAGGCCTTGAAGGAGTTACCTAGA
GAAAACATACAAGTGGCCACAAAGTTTGGGTTTGTAGAATTGGGATTTAC
TTCTGTGATCGTGAAGGGTACCCCTGAGTATGTGCGCTCGTGTTGTGAAG
CTAGTTTGAGGCGCCTTGATGTGGAATATATTGATCTGTACTATCAACAT
AGAGTGGACACATCAGTTCCCATAGAGGAAACCATTGGCGAAATGAAAAA
GCTGGTGGAAGAGGGTAAAATCAAGTACATAGGATTATCTGAGGCTAGCC
CAGATACAATTAGGAGAGCACATGCTGTTCATCCCATCACAGCTGTACAA
CTGGAATGGTCCCTTTGGGCTCGTGACATTGAGAATGAGATAGTACCACT
TTGCAGGGAGCTTGGCATTGGAATAGTTCCATACTGTCCTCTTGGTCGTG
GATTTTTCGGTGGTAAAGCTGTTGTGGAAAGTGTGCC
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