DR403327

Overview
NameDR403327
Unique NameDR403327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: Y2298_MYCTU (Uncharacterized oxidoreductase Rv2298/MT2355 OS=Mycobacterium tuberculosis GN=Rv2298 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15
Identity = 64/213 (30.05%), Postives = 101/213 (47.42%), Query Frame = 1
Query:  109 EVSKLGFGCMSLSG---GYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVES 732
            +VS++G G         GY    +      I+K A + G+T FDTA+ YG   +E +LG+AL +  R  + VA+K            V   P  +++   AS RRL +  I LY  H+ +  VP    +  M+ L++ G I   G+S  S    R+A A    P+ + Q+ +SL   D   ++VP        ++ Y PL +G  GGK  +E+
Sbjct:   11 QVSRIGLGTWQFGSREWGYGDRYATGAARDIVKRARALGVTLFDTAEIYGLGKSERILGEALGD-DRTEVVVASKV---------FPVAPFPAVIKNRERASARRLQLNRIPLYQIHQPNPVVPDSVIMPGMRDLLDSGDIGAAGVSNYSLARWRKADAALGRPVVSNQVHFSLAHPDALEDLVPFAELENRIVIAYSPLAQGLLGGKYGLEN 213          
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: YDBC_ECOLI (Putative oxidoreductase ydbC OS=Escherichia coli (strain K12) GN=ydbC PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.983e-14
Identity = 55/210 (26.19%), Postives = 106/210 (50.48%), Query Frame = 1
Query:   91 LGTQGLEVSKLGFGCMSLSGG--YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRV--DTSVP----IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLG 696
            LGT+   V++LG+G M L+G   +  P      I++++ A + G+   DT+D YGP+    ++ +AL     +++ + TK G       S +   +P  ++     +LR L ++ +D+     +  D   P    IE ++  + ++ ++G +K+IGLS  +P  +  A  +  I  VQ E+++ A   ++ ++      GI  VP+ PLG
Sbjct:    8 LGTKS--VNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYGPHVTNQIIREALYPY-SDDLTIVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIGLSNVTPTQVAEARKIAEIVCVQNEYNI-AHRADDAMIDALAHDGIAYVPFFPLG 213          
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: YCSN_BACSU (Uncharacterized oxidoreductase ycsN OS=Bacillus subtilis GN=ycsN PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.794e-14
Identity = 63/198 (31.82%), Postives = 91/198 (45.96%), Query Frame = 1
Query:  169 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFV-----ELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEI---VPLCRELGIGIVPYCPLGRGFFGGKAVVES 732
            S+ + +S+I+     GIT FD AD YG YT E L G AL   P  RENI++ TK G V          S     +  ++ +  E SL  L  +YID+   HR D  +  E      + L   GK++Y G+S       R   +  P   V  +  L A ++EN +   + LC+E  I  + + PL     GGK   E+
Sbjct:   28 SDAELLSLIEWCIDHGITTFDHADIYGGYTCEKLFGNALALSPGLRENIELVTKCGIVLESPERPAHRSHHYNTSKSHILASVEQSLMNLRTDYIDMLLIHRPDPLMDPEGVAEAFQALKCSGKVRYFGVSNFKDHQYRMLESYLPEKLVTNQIELSAYELENMLDGTLNLCQEKRIPPMAWSPLA----GGKVFTEN 221          
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: Y1669_ARATH (Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana GN=At1g06690 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.794e-14
Identity = 72/239 (30.13%), Postives = 111/239 (46.44%), Query Frame = 1
Query:   82 RVKLGTQGLEVSKLGFGCMSLSGG--YNSPLSEEDGISIIKHAFS----KGITFFDTADKYGP------YTNEILLGKALKE----LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH-----PITAVQLEWSLWARDIENE-IVPLCRELGIGIVPYCPLGRGFFGGKAVVES 732
            +VKLG   L+V+KLG G  S      +N    ++  +   K AF      GI FFDTA+ YG        ++E LLG+ ++E     P   + VATKF  +   F         E V +  + SL RL++  +DLY  H        E  +  +   VE+G +K +G+S  S   +R A+        P+ + Q+ +SL  R  E   +   C ELG+ ++ Y P+ +G   GK   E+
Sbjct:   48 KVKLGGSDLKVTKLGIGVWSWGDNSYWNDFQWDDRKLKAAKGAFDTSLDNGIDFFDTAEVYGSKFSLGAISSETLLGRFIRERKERYPGAEVSVATKFAALPWRFGR-------ESVVTALKDSLSRLELSSVDLYQLHWPGLWGN-EGYLDGLGDAVEQGLVKAVGVSNYSEKRLRDAYERLKKRGIPLASNQVNYSLIYRAPEQTGVKAACDELGVTLIAYSPIAQGALTGKYTPEN 278          
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: KCAB3_RAT (Voltage-gated potassium channel subunit beta-3 OS=Rattus norvegicus GN=Kcnab3 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.873e-14
Identity = 62/211 (29.38%), Postives = 101/211 (47.87%), Query Frame = 1
Query:   91 LGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPL 693
            LG  GL VS LG G     G   S +S+E    ++  A+  G+  FDTA+ Y     E  LG  LK     R +  + TK  +   G  +   +G + +++    + SL RL +EY+D+ + +R D S P+EE +  M  ++ +G   Y G S  S   I  A+++       P    Q E   + R+ +E ++  L  ++G+G V + PL
Sbjct:   83 LGKSGLRVSCLGLGTWVTFG---SQISDETAEDLLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFW---GGQAETERGLSRKHIIEGLQGSLDRLQLEYVDIVFANRSDPSSPMEEIVRAMTYVINQGLALYWGTSRWSAAEIMEAYSMARQFNLIPPVCEQAENHFFQREKVEMQLPELYHKIGVGSVTWSPL 287          
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: KCAB3_HUMAN (Voltage-gated potassium channel subunit beta-3 OS=Homo sapiens GN=KCNAB3 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.159e-13
Identity = 62/219 (28.31%), Postives = 101/219 (46.12%), Query Frame = 1
Query:   91 LGTQGLEVSKLGFGCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP--RENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH------PITAVQLEWSLWARD-IENEIVPLCRELGIGIVPYCPLGRGFFGGK 717
            LG  GL VS LG G     G   S +S+E    ++  A+  G+  FDTA+ Y     E  LG  LK     R +  + TK  +   G  +   +G + +++      SL RL + Y+D+ + +R D + P+EE +  M  ++ +G   Y G S      I  A+++       P    Q E  L+ R+ +E ++  L  ++G+G V + PL  G    K
Sbjct:   83 LGKSGLRVSCLGLGTWVTFG---SQISDETAEDVLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFW---GGQAETERGLSRKHIIEGLRGSLERLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAAEIMEAYSMARQFNLIPPVCEQAEHHLFQREKVEMQLPELYHKIGVGSVTWYPLACGLITSK 295          
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: AAD3_YEAST (Putative aryl-alcohol dehydrogenase AAD3 OS=Saccharomyces cerevisiae GN=AAD3 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.372e-13
Identity = 59/243 (24.28%), Postives = 111/243 (45.68%), Query Frame = 1
Query:   55 AEDKKLQVPRVKL--GTQGLEVSKLGFGCMSLSGG---YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP-RENIQVATKFGFVELGF------TSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA------HAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVE 729
            A D   ++ R++    T  ++VS L  G +S  G    +   +++     ++   +  G  F D A+      +E  +G+ ++    R+ I +ATKF   +  +      T+         +      SLR+L  ++ID+ Y H  D    IEE +  +  LV++GK+ Y+G+S+     +  A      +   P +  Q +W++  RD E +I+P+ R  G+ + P+  +G G F  K  +E
Sbjct:    5 ASDSSSKLGRLRFLSETAAIKVSPLILGEVSYDGARSDFLKSMNKNRAFELLDTFYEAGGNFIDAANNCQNEQSEEWIGEWIQSRRLRDQIVIATKFIKSDKKYKAGESNTANYCGNHKRSLHVSVRDSLRKLQTDWIDILYVHWWDYMSSIEEFMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSYGKTPFSIYQGKWNVLNRDFERDIIPMARHFGMALAPWDVMGGGRFQSKKAME 247          
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: YEAE_ECOLI (Uncharacterized protein yeaE OS=Escherichia coli (strain K12) GN=yeaE PE=4 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.751e-13
Identity = 52/175 (29.71%), Postives = 89/175 (50.86%), Query Frame = 1
Query:  184 ISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE---ASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGR 699
            ++ ++     G+T  DTA+ Y     E ++G+AL  L RE + + +K      G    I         + CEASLRRL+ +Y+DLY  H    S   EET+  M+KL+ +GKI+  G+S    A    + +    +     Q+ + L +R IE +++P C++  + ++ Y PL +
Sbjct:   35 VAALRAGIELGLTLIDTAEMYADGGAEKVVGEALTGL-REKVFLVSKVYPWNAGGQKAI---------NACEASLRRLNTDYLDLYLLH-WSGSFAFEETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGNQCATNQVLYHLGSRGIEYDLLPWCQQQQMPVMAYSPLAQ 198          
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: AAD10_YEAST (Putative aryl-alcohol dehydrogenase AAD10 OS=Saccharomyces cerevisiae GN=AAD10 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.751e-13
Identity = 47/156 (30.13%), Postives = 77/156 (49.36%), Query Frame = 1
Query:  298 RENIQVATKF-----GF-VELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA------HAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGKAVVE 729
            R+ I +ATKF     G+ V  G ++         +      SLR+L  ++ID+ Y H  D    IEE +  +  LV++GK+ Y+G+S+     +  A      H   P +  Q +W++  RD E +I+P+ R  G+ + P+  +G G F  K  VE
Sbjct:    7 RDQIVIATKFTTDYKGYDVGKGKSANFCGNHKRSLHVSVRDSLRKLQTDWIDILYVHWWDYMSSIEEVMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSHGKTPFSIYQGKWNVLNRDFERDIIPMARHFGMALAPWDVMGGGRFQSKKAVE 162          
BLAST of DR403327 vs. ExPASy Swiss-Prot
Match: ARK74_HUMAN (Aflatoxin B1 aldehyde reductase member 4 OS=Homo sapiens GN=AKR7L PE=2 SV=5)

HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12
Identity = 60/204 (29.41%), Postives = 93/204 (45.59%), Query Frame = 1
Query:  130 GCMSLSGGYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPREN--IQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRELGIGIVPYCPLGRGFFGGK 717
            G M +    ++P S     ++ +    +G T  DTA  Y    +E +LG     +   +  +++ATK       +    +K  P+ VRS  E SL+RL    +DL+Y H  D S P+EET+    +L +EGK   +GLS       A   T+ +++     T  Q  +S   R +E E+ P  R  G+    Y PL  G   GK
Sbjct:   15 GAMEMGRRMDAPTSA----AVTRAFLERGHTEIDTAFLYSDGQSETILGGLGLRMGSSDCRVKIATKAN----PWIGNSLK--PDSVRSQLETSLKRLQCPUVDLFYLHAPDHSAPVEETLRACHQLHQEGKFVELGLSNYAAWEVAEICTLCKSNGWILPTVYQGMYSATTRQVETELFPCLRHFGLRFYAYNPLAGGLLTGK 208          
The following BLAST results are available for this feature:
BLAST of DR403327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
Y2298_MYCTU4.705e-1530.05Uncharacterized oxidoreductase Rv2298/MT2355 OS=My... [more]
YDBC_ECOLI3.983e-1426.19Putative oxidoreductase ydbC OS=Escherichia coli (... [more]
YCSN_BACSU6.794e-1431.82Uncharacterized oxidoreductase ycsN OS=Bacillus su... [more]
Y1669_ARATH6.794e-1430.13Uncharacterized oxidoreductase At1g06690, chloropl... [more]
KCAB3_RAT8.873e-1429.38Voltage-gated potassium channel subunit beta-3 OS=... [more]
KCAB3_HUMAN1.159e-1328.31Voltage-gated potassium channel subunit beta-3 OS=... [more]
AAD3_YEAST3.372e-1324.28Putative aryl-alcohol dehydrogenase AAD3 OS=Saccha... [more]
YEAE_ECOLI5.751e-1329.71Uncharacterized protein yeaE OS=Escherichia coli (... [more]
AAD10_YEAST5.751e-1330.13Putative aryl-alcohol dehydrogenase AAD10 OS=Sacch... [more]
ARK74_HUMAN1.673e-1229.41Aflatoxin B1 aldehyde reductase member 4 OS=Homo s... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244J19 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244J19 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403327 ID=DR403327; Name=DR403327; organism=Citrus sinensis; type=EST; length=737bp
GGCCGGGGGAAAGAATACTAAAACAAAGAAACCGAAATNNNNGCTGCAAG
TATGGCAGAAGATAAGAAACTCCAAGTTCCAAGAGTGAAACTTGGAACCC
AAGGCCTTGAGGTTTCAAAGCTGGGGTTTGGATGCATGAGCCTCAGTGGC
GGCTATAATTCTCCACTCTCTGAAGAGGATGGCATCTCAATAATAAAGCA
TGCTTTCAGTAAAGGAATCACTTTCTTTGACACTGCTGATAAATATGGAC
CATATACTAATGAAATTCTTCTTGGAAAGGCCTTGAAGGAGTTACCTAGA
GAAAACATACAAGTGGCCACAAAGTTTGGGTTTGTAGAATTGGGATTTAC
TTCTGTGATCGTGAAGGGTACCCCTGAGTATGTGCGCTCGTGTTGTGAAG
CTAGTTTGAGGCGCCTTGATGTGGAATATATTGATCTGTACTATCAACAT
AGAGTGGACACATCAGTTCCCATAGAGGAAACCATTGGCGAAATGAAAAA
GCTGGTGGAAGAGGGTAAAATCAAGTACATAGGATTATCTGAGGCTAGCC
CAGATACAATTAGGAGAGCACATGCTGTTCATCCCATCACAGCTGTACAA
CTGGAATGGTCCCTTTGGGCTCGTGACATTGAGAATGAGATAGTACCACT
TTGCAGGGAGCTTGGCATTGGAATAGTTCCATACTGTCCTCTTGGTCGTG
GATTTTTCGGTGGTAAAGCTGTTGTGGAAAGTGTGCC
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