DR403304
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403304 vs. ExPASy Swiss-Prot
Match: TRXH4_ARATH (Thioredoxin H-type 4 OS=Arabidopsis thaliana GN=TRX4 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 1.387e-30 Identity = 45/78 (57.69%), Postives = 58/78 (74.36%), Query Frame = 1
Query: 220 PCRFIAPFLAELAKK-LPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKTVDKVVGAKKEELQQTIAKHLATASA 450
PCR IAP +LAKK + + +F KVDVDEL+SVA ++ VEAMPTF+F+K G+ VDK+VGA KE+LQ I KH +A
Sbjct: 42 PCRMIAPIFNDLAKKFMSSAIFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHTGVTTA 119 HSP 2 Score: 60.4622 bits (145), Expect = 1.387e-30 Identity = 25/38 (65.79%), Postives = 31/38 (81.58%), Query Frame = 2
Query: 101 AAEEGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW 214
AAEEGQVIGCHT + W QL K+ E+ +L+V+DFTASW
Sbjct: 2 AAEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASW 39
BLAST of DR403304 vs. ExPASy Swiss-Prot
Match: TRXH3_ARATH (Thioredoxin H-type 3 OS=Arabidopsis thaliana GN=TRX3 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.293e-29 Identity = 43/77 (55.84%), Postives = 57/77 (74.03%), Query Frame = 1
Query: 220 PCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKTVDKVVGAKKEELQQTIAKHLATASA 450
PCRFIAP A+LAKK +V+F KVDVDEL +VA ++ V+AMPTF+F+KEG+ + VVGA KEE+ + KH +A
Sbjct: 41 PCRFIAPVFADLAKKHLDVVFFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVAA 117 HSP 2 Score: 58.5362 bits (140), Expect = 4.293e-29 Identity = 23/37 (62.16%), Postives = 32/37 (86.49%), Query Frame = 2
Query: 104 AEEGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW 214
A EG+VI CHTVE W E+L+ +NE+K+L+V+DFTA+W
Sbjct: 2 AAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATW 38
BLAST of DR403304 vs. ExPASy Swiss-Prot
Match: TRXH_WHEAT (Thioredoxin H-type OS=Triticum aestivum PE=1 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 2.089e-28 Identity = 45/74 (60.81%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 217 GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKTVDKVVGAKKEELQQTIAKHLA 438
GPCR +AP A+LAKK P +FLKVDVDELK +A ++VEAMPTF+F+KEG D+VVGA KEEL + H A
Sbjct: 53 GPCRIMAPIFADLAKKFPAAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAIKEELTTKVGLHAA 126 HSP 2 Score: 50.0618 bits (118), Expect = 2.089e-28 Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 2
Query: 89 AEMAAAEEGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW 214
A AA G+VI H++E W Q++++N K+LVV+DFTASW
Sbjct: 10 ATAAAVGAGEVISVHSLEQWTMQIEEANAAKKLVVIDFTASW 51
BLAST of DR403304 vs. ExPASy Swiss-Prot
Match: TRXH_BRARA (Thioredoxin H-type OS=Brassica rapa GN=PEC-2 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 6.449e-27 Identity = 43/77 (55.84%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 220 PCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKTVDKVVGAKKEELQQTIAKHLATASA 450
PCRFIAP ELAKK +V+F KVDVDEL +VA ++ V+AMPTF+++K + +DKVVGA KEE++ + KH A+A
Sbjct: 47 PCRFIAPIFVELAKKHLDVVFFKVDVDELATVAKEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKHSQVAAA 123 HSP 2 Score: 51.2174 bits (121), Expect = 6.449e-27 Identity = 23/44 (52.27%), Postives = 31/44 (70.45%), Query Frame = 2
Query: 95 MAAAEE----GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW 214
MAA E G+VI CHTVE WN +L+ + E+ +L+V+DFTA W
Sbjct: 1 MAATAELIPAGEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVW 44
BLAST of DR403304 vs. ExPASy Swiss-Prot
Match: TRXH_BRAOL (Thioredoxin H-type OS=Brassica oleracea GN=BOPC17 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 6.449e-27 Identity = 43/77 (55.84%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 220 PCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKTVDKVVGAKKEELQQTIAKHLATASA 450
PCRFIAP ELAKK +V+F KVDVDEL +VA ++ V+AMPTF+++K + +DKVVGA KEE++ + KH A+A
Sbjct: 47 PCRFIAPIFVELAKKHLDVVFFKVDVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKHSQVAAA 123 HSP 2 Score: 51.2174 bits (121), Expect = 6.449e-27 Identity = 23/44 (52.27%), Postives = 31/44 (70.45%), Query Frame = 2
Query: 95 MAAAEE----GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW 214
MAA E G+VI CHTVE WN +L+ + E+ +L+V+DFTA W
Sbjct: 1 MAATAEVIPAGEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVW 44
BLAST of DR403304 vs. ExPASy Swiss-Prot
Match: TRXH1_BRANA (Thioredoxin H-type 1 OS=Brassica napus GN=THL-1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 6.449e-27 Identity = 43/77 (55.84%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 220 PCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKTVDKVVGAKKEELQQTIAKHLATASA 450
PCRFIAP ELAKK +V+F KVDVDEL +VA ++ V+AMPTF+++K + +DKVVGA KEE++ + KH A+A
Sbjct: 47 PCRFIAPIFVELAKKHLDVVFFKVDVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEIEAKLLKHSQVAAA 123 HSP 2 Score: 51.2174 bits (121), Expect = 6.449e-27 Identity = 23/44 (52.27%), Postives = 31/44 (70.45%), Query Frame = 2
Query: 95 MAAAEE----GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW 214
MAA E G+VI CHTVE WN +L+ + E+ +L+V+DFTA W
Sbjct: 1 MAATAEVIPAGEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVW 44
BLAST of DR403304 vs. ExPASy Swiss-Prot
Match: TRXH9_ARATH (Thioredoxin H-type 9 OS=Arabidopsis thaliana GN=TRX9 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.975e-17 Identity = 34/69 (49.28%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 217 GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKTVDKVVGAKKEELQQTI 423
GPC+ +APF EL++K +++FL VDVDEL ++ W ++A PTF FLK G+ + K+VGA K ELQ+ +
Sbjct: 58 GPCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKV 126 HSP 2 Score: 28.4906 bits (62), Expect = 1.975e-17 Identity = 9/27 (33.33%), Postives = 21/27 (77.78%), Query Frame = 2
Query: 134 TVEAWNEQLQKSNETKQLVVVDFTASW 214
T E+W+++L +++ ++VV +F+A+W
Sbjct: 30 TKESWDDKLAEADRDGKIVVANFSATW 56
BLAST of DR403304 vs. ExPASy Swiss-Prot
Match: TRXH2_ARATH (Thioredoxin H-type 2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 5.652e-17 Identity = 34/71 (47.89%), Postives = 53/71 (74.65%), Query Frame = 1
Query: 217 GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKTVDKVVGAKKEELQQTIAK 429
GPCR I P + +A K +V F+K+DVDEL VA ++ V AMPTF+ +K GK +++++GAKK+EL++ ++K
Sbjct: 60 GPCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130 HSP 2 Score: 28.8758 bits (63), Expect = 5.652e-17 Identity = 12/37 (32.43%), Postives = 21/37 (56.76%), Query Frame = 2
Query: 104 AEEGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASW 214
+E +V+ + W + E+ +L+VVDF+ASW
Sbjct: 22 SEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASW 58
BLAST of DR403304 vs. ExPASy Swiss-Prot
Match: TRXH_POPJC (Thioredoxin H-type OS=Populus jackii PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.341e-17 Identity = 34/69 (49.28%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 217 GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKTVDKVVGAKKEELQQTI 423
GPC+ IAP+ EL++ P+++FL +DVDEL + W ++A PTF FL++G+ VDK+VGA K EL + I
Sbjct: 59 GPCKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANKPELHKKI 127 HSP 2 Score: 26.1794 bits (56), Expect = 7.341e-17 Identity = 8/27 (29.63%), Postives = 19/27 (70.37%), Query Frame = 2
Query: 134 TVEAWNEQLQKSNETKQLVVVDFTASW 214
T E W+++L +++ ++V+ +F+A W
Sbjct: 31 TKERWDQKLSEASRDGKIVLANFSARW 57
BLAST of DR403304 vs. ExPASy Swiss-Prot
Match: THIO_HORSE (Thioredoxin OS=Equus caballus GN=TXN PE=3 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 2.236e-15 Identity = 35/69 (50.72%), Postives = 49/69 (71.01%), Query Frame = 1
Query: 217 GPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKTVDKVVGAKKEELQQTI 423
GPC+ I PF L++K NV+FL+VDVD+ + VA + V+ MPTF F K+G+ VD+ GA KE+L+ TI
Sbjct: 33 GPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVAAECEVKCMPTFQFFKKGQKVDEFSGANKEKLEATI 101 HSP 2 Score: 24.6386 bits (52), Expect = 2.236e-15 Identity = 12/24 (50.00%), Postives = 17/24 (70.83%), Query Frame = 2
Query: 143 AWNEQLQKSNETKQLVVVDFTASW 214
A+ E L + E +LVVVDF+A+W
Sbjct: 10 AFQEALNSAGE--KLVVVDFSATW 31 The following BLAST results are available for this feature:
BLAST of DR403304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403304 ID=DR403304; Name=DR403304; organism=Citrus sinensis; type=EST; length=554bpback to top |