DR403296

Overview
NameDR403296
Unique NameDR403296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length153
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR403296 vs. ExPASy Swiss-Prot
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare GN=ICY PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.829e-11
Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 3 
Query:    6 VLKANVQVVAGKLYYLTLEVIDAGKKKIYEAKIWVKPWINFKQLQEFK 149
            ++K   QVVAG ++Y T+EV + G KK+YEAK+W K W NFKQLQEFK
Sbjct:   57 LVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFK 104
[Close]
BLAST of DR403296 vs. ExPASy Swiss-Prot
Match: CYT_SOLTU (Cysteine proteinase inhibitor (Fragment) OS=Solanum tuberosum GN=CYS-PIN PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.612e-11
Identity = 30/48 (62.50%), Postives = 35/48 (72.92%), Query Frame = 3 
Query:    6 VLKANVQVVAGKLYYLTLEVIDAGKKKIYEAKIWVKPWINFKQLQEFK 149
            VL    QVVAG +YY+TL   D G KKIY+ KIWVK W NFK++QEFK
Sbjct:   12 VLNVKEQVVAGMMYYITLVATDDGYKKIYKTKIWVKEWENFKEVQEFK 59
The following BLAST results are available for this feature:
BLAST of DR403296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CYT1_HORVU5.829e-1160.42Cysteine proteinase inhibitor OS=Hordeum vulgare G... [more]
CYT_SOLTU7.612e-1162.50Cysteine proteinase inhibitor (Fragment) OS=Solanu... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244H24 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244H24 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403296 ID=DR403296; Name=DR403296; organism=Citrus sinensis; type=EST; length=153bp
GGGGGGTGTTGAAGGCCAATGTACAGGTTGTTGCTGGCAAGTTATACTAT
CTTACACTGGAAGTGATTGATGCCGGCAAGAAGAAGATATATGAAGCTAA
AATTTGGGTGAAGCCGTGGATTAACTTTAAGCAACTTCAGGAGTTCAAGC
ATG
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