DR403294

Overview
NameDR403294
Unique NameDR403294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6928 contig Csv1_Contig6928:11..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CATD_DICDI (Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.308e-31
Identity = 75/155 (48.39%), Postives = 92/155 (59.35%), Query Frame = 2
Query:  230 SKEEETTRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXX-RNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            +  E   R P +  N   +L    T  + +++F DAQY+G ++IGTP Q F V+FDTGSSNLW+PS KC  +V                   NGT   IQYG+GA+SGF SQD+V VG L VK+Q F EAT E  I F  AKFDGILGL FQ IS
Sbjct:   28 ASRESRRRVPQKWSNRLSALNAGTT--IPISDFEDAQYYGAITIGTPGQAFKVVFDTGSSNLWIPSKKCPITVVACDLHNKYNSGASSTYVANGTDFTIQYGSGAMSGFVSQDSVTVGSLTVKDQLFAEATAEPGIAFDFAKFDGILGLAFQSIS 180          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.763e-30
Identity = 82/195 (42.05%), Postives = 104/195 (53.33%), Query Frame = 2
Query:  146 ALPNDGLVRIGLRKKKLGQINRLVGQTV-SKEEETTRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKV-----------GDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            A P   LVRI L K     I R + +   S E+   + PV +Y+              L N+MDAQY+GE+ IGTP Q FTV+FDTGSSNLWVPS  C    +                 +NGTS  I YG+G++SG+ SQD V V           G + V+ Q F EATK+  ITF+AAKFDGILG+ +  IS
Sbjct:   15 AAPASALVRIPLHK--FTSIRRTMSEVGGSVEDLIAKGPVSKYSQAVPAVTEGPIPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCQSASSASALGGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRIS 207          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CARP_ASPFU (Vacuolar protease A OS=Aspergillus fumigatus GN=pep2 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.763e-30
Identity = 67/139 (48.20%), Postives = 85/139 (61.15%), Query Frame = 2
Query:  284 SLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNGK 700
            SL D     V ++NF++AQYF E+S+GTP Q F V+ DTGSSNLWVP + C  S+                  NGT  AI+YG+G +SGF SQD +++GDL V  QDF EAT E  + F   +FDGILGLG+  IS  K
Sbjct:   66 SLNDMSRHDVLVDNFLNAQYFSEISLGTPPQKFKVVLDTGSSNLWVPGSDCS-SIACFLHNKYDSSASSTYKANGTEFAIKYGSGELSGFVSQDTLQIGDLKVVKQDFAEATNEPGLAFAFGRFDGILGLGYDTISVNK 203          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.061e-29
Identity = 76/187 (40.64%), Postives = 106/187 (56.68%), Query Frame = 2
Query:  164 LVRIGLRKKKLGQINRLVGQTV-SKEEETTRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNV---------KVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            ++RI LRK     I R + +   S E+   + P+ +Y++  S   ++     L N++DAQY+G++ IGTP Q FTV+FDTGSSNLWVPS  C    +                 +NGTS  I YG+G++SG+ SQD V         K   + V+ Q F EATK+  I F+AAKFDGILG+G+  IS
Sbjct:   21 IIRIPLRK--FTSIRRTMTEVGGSVEDLILKGPITKYSMQSSPKTTEPVSELLKNYLDAQYYGDIGIGTPPQCFTVVFDTGSSNLWVPSIHCKILDIACWVHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSDQSKARGIKVEKQIFGEATKQPGIVFVAAKFDGILGMGYPHIS 205          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CARP_NEUCR (Vacuolar protease A OS=Neurospora crassa GN=pep-4 PE=3 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.386e-29
Identity = 62/127 (48.82%), Postives = 84/127 (66.14%), Query Frame = 2
Query:  311 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            V + NFM+AQYF E++IGTP QTF V+ DTGSSNLWVPS++C  S+                 +NGTS  I+YG+G++SGF SQD + +GD+ + +Q F EAT E  + F   +FDGILGLG+  I+
Sbjct:   75 VPITNFMNAQYFSEITIGTPPQTFKVVLDTGSSNLWVPSSQCG-SIACYLHNKYESSESSTYKKNGTSFKIEYGSGSLSGFVSQDRMTIGDITINDQLFAEATSEPGLAFAFGRFDGILGLGYDRIA 200          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CARP_YEAST (Saccharopepsin OS=Saccharomyces cerevisiae GN=PEP4 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.364e-29
Identity = 64/130 (49.23%), Postives = 82/130 (63.08%), Query Frame = 2
Query:  311 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNGK 700
            V L N+++AQY+ ++++GTP Q F VI DTGSSNLWVPS +C  S+                  NGT  AIQYGTG++ G+ SQD + +GDL +  QDF EAT E  +TF   KFDGILGLG+  IS  K
Sbjct:   81 VPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSLEGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDK 209          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 5.266e-29
Identity = 62/126 (49.21%), Postives = 84/126 (66.67%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFS-VXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            L+N++DAQY+G ++IGTP Q+F V+FDTGSSNLWVPS +C F+ +                 +NGT+  IQYG+G++SG+ S D V +G + V  Q F EA  E  + F+AAKFDGILGLG+  IS
Sbjct:   60 LSNYLDAQYYGAITIGTPPQSFKVVFDTGSSNLWVPSKECSFTNIACLMHNKYNAKKSSTFEKNGTAFHIQYGSGSLSGYLSTDTVGLGGVSVTKQTFAEAINEPGLVFVAAKFDGILGLGYSSIS 185          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CATD_CANFA (Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.982e-29
Identity = 78/193 (40.41%), Postives = 101/193 (52.33%), Query Frame = 2
Query:  146 ALPNDGLVRIGLRKKKLGQINRLVGQTVSKEEET-TRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKV---------GDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            A P   LVRI L K     + R + +     E+   + P+ +Y               L N+MDAQY+GE+ IGTP Q FTV+FDTGSSNLWVPS  C    +                 +NGTS  I YG+G++SG+ SQD V V           + V+ Q F EATK+  ITF+AAKFDGILG+ +  IS
Sbjct:   15 AAPAAALVRIPLHK--FTSVRRTMTELGGPVEDLIAKGPISKYAQGAPAVTGGPIPEMLRNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSALSGLAGIKVERQTFGEATKQPGITFIAAKFDGILGMAYPRIS 205          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CATEB_XENLA (Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.001e-28
Identity = 72/179 (40.22%), Postives = 97/179 (54.19%), Query Frame = 2
Query:  161 GLVRIGLRKKKLGQINRLVGQTVSKEEETTRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNG 697
            GL+R+ L+++K   I +   +        T+  +       S  +       L N+MD QYFGE+SIGTP Q FTVIFDTGSSNLWVPS  C  S                   NG + ++QYGTG++SG    D+V V  ++V+NQ F E+  E   TF+ A FDGILGLG+  I+ G
Sbjct:   16 GLIRVPLKRQK--SIRKTPKEKGKLSHVWTQQGIDMVQYTDSCNNDQAPSEPLINYMDVQYFGEISIGTPPQNFTVIFDTGSSNLWVPSVYC-ISPACAQHNRFQPQLSSTYESNGNNFSLQYGTGSLSGVIGIDSVTVEGILVQNQQFGESVSEPGSTFVDASFDGILGLGYPSIAVG 191          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CATEA_XENLA (Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.822e-28
Identity = 70/179 (39.11%), Postives = 98/179 (54.75%), Query Frame = 2
Query:  161 GLVRIGLRKKKLGQINRLVGQTVSKEEETTRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNG 697
            GL+R+ L+++K   I + + +        T+  +       S  +       L N+MD +YFGE+S+GTP Q FTVIFDTGSSNLWVPS  C  S                   NG + ++QYGTG++SG    D V V  ++V+NQ F E+  E   TF+ A+FDGILGLG+  I+ G
Sbjct:   16 GLIRVPLKRQK--SIRKTLKEKGKLSHIWTQQGIDMVQYTDSCSNDQAPSEPLINYMDVEYFGEISVGTPPQNFTVIFDTGSSNLWVPSVYC-ISQACAQHDRFQPQLSSTYESNGNNFSLQYGTGSLSGVIGIDAVTVEGILVQNQQFGESVSEPGSTFVDAEFDGILGLGYPSIAVG 191          
The following BLAST results are available for this feature:
BLAST of DR403294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
CATD_DICDI4.308e-3148.39Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE... [more]
CATD_HUMAN4.763e-3042.05Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]
CARP_ASPFU4.763e-3048.20Vacuolar protease A OS=Aspergillus fumigatus GN=pe... [more]
CATD_MOUSE1.061e-2940.64Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1[more]
CARP_NEUCR1.386e-2948.82Vacuolar protease A OS=Neurospora crassa GN=pep-4 ... [more]
CARP_YEAST2.364e-2949.23Saccharopepsin OS=Saccharomyces cerevisiae GN=PEP4... [more]
ASPP_AEDAE5.266e-2949.21Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]
CATD_CANFA8.982e-2940.41Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1[more]
CATEB_XENLA2.001e-2840.22Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=... [more]
CATEA_XENLA5.822e-2839.11Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244H22 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244H22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403294 ID=DR403294; Name=DR403294; organism=Citrus sinensis; type=EST; length=700bp
GGGGTCGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTGTCTGTGCT
CTTTTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATT
CGGGCTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTT
GCCAAATGATGGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGGTC
AGATCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGACG
AGAACACCTGTCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGA
TACTGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGG
AGGTTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACA
GGAAGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTC
TTGCTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAA
GGAATGGGACATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGT
TTCTTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCA
GGATTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCA
AGTTTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAAATGGAAAA
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