DR403294

Overview
NameDR403294
Unique NameDR403294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6928 contig Csv1_Contig6928:11..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: NAPSA_MOUSE (Napsin-A OS=Mus musculus GN=Napsa PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.604e-28
Identity = 72/181 (39.78%), Postives = 94/181 (51.93%), Query Frame = 2
Query:  212 LVGQTVSKEEETTRTPVRRYNL------------------HGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNG 697
            L+G    +E +  R P++R +L                    S    +   V L+ FM+ QYFG + +GTP Q FTV+FDTGSSNLWVPS +C +FS+                  NGT  AIQYGTG +SG  SQDN+ +G +      F EA  E S+ F  A FDGILGLGF  ++ G
Sbjct:   12 LLGNLEPEEAKLIRVPLQRIHLGHRILNPLNGWEQLAELSRTSTSGGNPSFVPLSKFMNTQYFGTIGLGTPPQNFTVVFDTGSSNLWVPSTRCHFFSLACWFHHRFNPKASSSFRPNGTKFAIQYGTGRLSGILSQDNLTIGGIHDAFVTFGEALWEPSLIFALAHFDGILGLGFPTLAVG 192          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CATD_PIG (Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.297e-27
Identity = 66/136 (48.53%), Postives = 84/136 (61.76%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFF-SQDNVK---------VGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            L N+MDAQY+GE+ IGTP Q FTV+FDTGSSNLWVPS  C    +                 +NGT+ AI YG+G++SG+  SQD V          VG + V+ Q F EATK+  +TF+AAKFDGILG+ +  IS
Sbjct:    7 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTTFAIHYGSGSLSGYLSSQDTVSVPCNSALSGVGGIKVERQTFGEATKQPGLTFIAAKFDGILGMAYPRIS 142          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: RENI_CALJA (Renin OS=Callithrix jacchus GN=REN PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.437e-27
Identity = 61/134 (45.52%), Postives = 81/134 (60.45%), Query Frame = 2
Query:  302 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNGK 700
            T  V L N+MD QY+GE+ IGTP QTF V+FDTGSSN+WVPS+KC                       NGT   ++Y TG +SGF SQD + VG + V  Q F E T+  ++ F+ A+FDG++G+GF E + GK
Sbjct:   67 TSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDVITVGGITV-TQTFGEVTEMPALPFMLAEFDGVVGMGFSEQAIGK 199          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CATD_SHEEP (Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.437e-27
Identity = 62/135 (45.93%), Postives = 81/135 (60.00%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKV---------GDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            L N+MDAQY+GE+ IGTP Q FTV+FDTGS+NLWVPS  C    +                 +NGT+  I YG+G++SG+ SQD V V         G + V+ Q F EA K+  + F+AAKFDGILG+ +  IS
Sbjct:   46 LTNYMDAQYYGEIGIGTPPQCFTVVFDTGSANLWVPSIHCKLLDIACWVHHKYNSDKSSTYVKNGTTFDIHYGSGSLSGYLSQDTVSVPCNPSSSSPGGVTVQRQTFGEAIKQPGVVFIAAKFDGILGMAYPRIS 180          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CATD_BOVIN (Cathepsin D OS=Bos taurus GN=CTSD PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 6.437e-27
Identity = 62/135 (45.93%), Postives = 81/135 (60.00%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKV---------GDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            L N+MDAQY+GE+ IGTP Q FTV+FDTGS+NLWVPS  C    +                 +NGT+  I YG+G++SG+ SQD V V         G + V+ Q F EA K+  + F+AAKFDGILG+ +  IS
Sbjct:   51 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSANLWVPSIHCKLLDIACWTHRKYNSDKSSTYVKNGTTFDIHYGSGSLSGYLSQDTVSVPCNPSSSSPGGVTVQRQTFGEAIKQPGVVFIAAKFDGILGMAYPRIS 185          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: NAPSA_HUMAN (Napsin-A OS=Homo sapiens GN=NAPSA PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.407e-27
Identity = 63/128 (49.22%), Postives = 77/128 (60.16%), Query Frame = 2
Query:  311 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            V L+N+ D QYFGE+ +GTP Q FTV FDTGSSNLWVPS +C +FSV                  NGT  AIQYGTG + G  S+D + +G +   +  F EA  E S+ F  A FDGILGLGF  +S
Sbjct:   68 VPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHRFDPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAFAHFDGILGLGFPILS 195          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CARPV_CANAL (Vacuolar aspartic protease OS=Candida albicans GN=APR1 PE=3 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 8.407e-27
Identity = 61/125 (48.80%), Postives = 77/125 (61.60%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            L N+++AQYF E+ IGTP Q F VI DTGSSNLWVPS  C  S+                  NG+  +IQYG+G++ G+ SQD + +GDLV+  QDF EAT E  + F   KFDGILGL +  IS
Sbjct:   96 LTNYLNAQYFTEIQIGTPGQPFKVILDTGSSNLWVPSQDCT-SLACFLHAKYDHDASSTYKVNGSEFSIQYGSGSMEGYISQDVLTIGDLVIPGQDFAEATSEPGLAFAFGKFDGILGLAYDTIS 219          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: RENI_RAT (Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.873e-26
Identity = 63/127 (49.61%), Postives = 76/127 (59.84%), Query Frame = 2
Query:  302 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGF 679
            T  V L N++D QY+GE+ IGTPSQTF VIFDTGS+NLWVPS KC                       NGT   I YG+G + GF SQD V VG ++V  Q F E T+   I F+ AKFDG+LG+GF
Sbjct:   71 TSPVVLTNYLDTQYYGEIGIGTPSQTFKVIFDTGSANLWVPSTKCGPLYTACEIHNLYDSSESSSYMENGTEFTIHYGSGKVKGFLSQDVVTVGGIIV-TQTFGEVTELPLIPFMLAKFDGVLGMGF 196          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: RENI_PANTR (Renin OS=Pan troglodytes GN=REN PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26
Identity = 70/190 (36.84%), Postives = 101/190 (53.16%), Query Frame = 2
Query:  143 FALPNDGLVRIGLRKKKLGQINRLV---GQTVSKEEETTRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNGK 700
            F LP D      +  K++  I   +   G  +++       P++R  L  +     T  V L N+MD QY+GE+ IGTP QTF V+FDTGSSN+WVPS+KC                       NGT   ++Y TG +SGF SQD + VG + V  Q F E T+  ++ F+ A+FDG++G+GF E + G+
Sbjct:   22 FGLPTDTTTFKRIFLKRMPSIRESLKERGVDMARLGPEWSQPMKRLTLGNT-----TSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGR 205          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: RENI_HUMAN (Renin OS=Homo sapiens GN=REN PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26
Identity = 70/190 (36.84%), Postives = 101/190 (53.16%), Query Frame = 2
Query:  143 FALPNDGLVRIGLRKKKLGQINRLV---GQTVSKEEETTRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNGK 700
            F LP D      +  K++  I   +   G  +++       P++R  L  +     T  V L N+MD QY+GE+ IGTP QTF V+FDTGSSN+WVPS+KC                       NGT   ++Y TG +SGF SQD + VG + V  Q F E T+  ++ F+ A+FDG++G+GF E + G+
Sbjct:   22 FGLPTDTTTFKRIFLKRMPSIRESLKERGVDMARLGPEWSQPMKRLTLGNT-----TSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGR 205          
The following BLAST results are available for this feature:
BLAST of DR403294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
NAPSA_MOUSE7.604e-2839.78Napsin-A OS=Mus musculus GN=Napsa PE=1 SV=1[more]
CATD_PIG1.297e-2748.53Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2[more]
RENI_CALJA6.437e-2745.52Renin OS=Callithrix jacchus GN=REN PE=2 SV=1[more]
CATD_SHEEP6.437e-2745.93Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 ... [more]
CATD_BOVIN6.437e-2745.93Cathepsin D OS=Bos taurus GN=CTSD PE=1 SV=2[more]
NAPSA_HUMAN8.407e-2749.22Napsin-A OS=Homo sapiens GN=NAPSA PE=1 SV=1[more]
CARPV_CANAL8.407e-2748.80Vacuolar aspartic protease OS=Candida albicans GN=... [more]
RENI_RAT1.873e-2649.61Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2[more]
RENI_PANTR3.195e-2636.84Renin OS=Pan troglodytes GN=REN PE=3 SV=1[more]
RENI_HUMAN3.195e-2636.84Renin OS=Homo sapiens GN=REN PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244H22 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244H22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403294 ID=DR403294; Name=DR403294; organism=Citrus sinensis; type=EST; length=700bp
GGGGTCGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTGTCTGTGCT
CTTTTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATT
CGGGCTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTT
GCCAAATGATGGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGGTC
AGATCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGACG
AGAACACCTGTCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGA
TACTGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGG
AGGTTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACA
GGAAGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTC
TTGCTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAA
GGAATGGGACATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGT
TTCTTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCA
GGATTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCA
AGTTTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAAATGGAAAA
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