DR403294

Overview
NameDR403294
Unique NameDR403294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6928 contig Csv1_Contig6928:11..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPC_SUNMU (Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.641e-22
Identity = 52/124 (41.94%), Postives = 75/124 (60.48%), Query Frame = 2
Query:  326 FMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNG 697
            +MDA YFGE+SIGTP Q F V+FDTGSSNLWVPS  C  S                   NG + ++QYG+G+++GFF  D + V ++ V +Q+F  +  E    F+ A+FDGI+G+ +  ++ G
Sbjct:   68 YMDASYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTGHARFNPNQSSTYSTNGQTFSLQYGSGSLTGFFGYDTMTVQNIKVPHQEFGLSQNEPGTNFIYAQFDGIMGMAYPSLAMG 190          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPC_RHIFE (Gastricsin OS=Rhinolophus ferrumequinum GN=PGC PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.143e-22
Identity = 52/124 (41.94%), Postives = 74/124 (59.68%), Query Frame = 2
Query:  326 FMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNG 697
            +MDA YFGE+SIGTP Q F V+FDTGSSNLWVPS  C  +                   NG + ++QYG+G+++GFF  D + V  + V NQ+F  +  E    F+ A+FDGI+G+ +  ++ G
Sbjct:   68 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-TQACTGHTRFNPSQSSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGMAYPSLAMG 190          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPA3_RABIT (Pepsin-3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.799e-22
Identity = 67/174 (38.51%), Postives = 90/174 (51.72%), Query Frame = 2
Query:  179 LRKKKLGQINRLVGQTVSKEEETTRTP--VRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISN 694
            +RKK L +   L+ + + K+   T TP    +Y    +     T+   L N++D +YFG + IGTP+Q FTVIFDTGSSNLWVPS  C  S                      S +I YGTG+++GF   D VKVG++   NQ F  +  E       A FDGILGL +  IS+
Sbjct:   23 VRKKSLRK--NLIEKGLLKDYLKTHTPNLATKYLPKAAFDSVPTE--TLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-SSAACSVHNQFNPEDSSTFQATSESLSITYGTGSMTGFLGYDTVKVGNIEDTNQIFGLSESEPGSFLYYAPFDGILGLAYPSISS 191          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CATE_HUMAN (Cathepsin E OS=Homo sapiens GN=CTSE PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.799e-22
Identity = 60/132 (45.45%), Postives = 76/132 (57.58%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNV-----KVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNG 697
            L N++D +YFG +SIG+P Q FTVIFDTGSSNLWVPS  C  S                  + G S +IQYGTG++SG    D V     +V  L V  Q F E+  E   TF+ A+FDGILGLG+  ++ G
Sbjct:   70 LINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYC-TSPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGSLSGIIGADQVSAFATQVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVG 200          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: ASP3_CAEEL (Aspartic protease 3 OS=Caenorhabditis elegans GN=asp-3 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.655e-22
Identity = 62/145 (42.76%), Postives = 77/145 (53.10%), Query Frame = 2
Query:  281 GSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYF-SVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGD----LVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNGK 700
            G + + D     L+++ +AQY+G V+IGTP Q F V+FDTGSSNLWVP A C F  +                   G S  IQYGTG++ G    D V  G        KNQ    AT E  ITF+AAKFDGI G+G+  IS  K
Sbjct:   49 GYIPNKDAFNEGLSDYSNAQYYGPVTIGTPPQNFQVLFDTGSSNLWVPCANCPFGDIACRMHNRFDCKKSSSCTATGASFEIQYGTGSMKGTVDNDVVCFGHDTTYCTDKNQGLACATSEPGITFVAAKFDGIFGMGWDTISVNK 193          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPC_CAVPO (Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.143e-22
Identity = 52/125 (41.60%), Postives = 75/125 (60.00%), Query Frame = 2
Query:  323 NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNG 697
            ++MDA YFG++S+GTP Q+F V+FDTGSSNLWVPS  C  S+                     S +++YGTG+++G F  D + + D+ V  Q+F  +  E    F+ A+FDGILGLG+  +S G
Sbjct:   73 SYMDAAYFGQISLGTPPQSFQVLFDTGSSNLWVPSVYC-SSLACTTHTRFNPRDSSTYVATDQSFSLEYGTGSLTGVFGYDTMTIQDIQVPKQEFGLSETEPGSDFVYAEFDGILGLGYPGLSEG 196          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPC_RABIT (Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.064e-21
Identity = 52/125 (41.60%), Postives = 74/125 (59.20%), Query Frame = 2
Query:  323 NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNG 697
            +++DA YFGE+SIGTPSQ F V+FDTGSSNLWVPS  C                      + T  +++YG+G+++GFF  D   + ++ V NQ+F  +  E    FL A+FDGI+GL +  +S G
Sbjct:   67 DYLDAAYFGEISIGTPSQNFLVLFDTGSSNLWVPSVYCQSEACTTHNRFNPSKSSTFYTYDQT-FSLEYGSGSLTGFFGYDTFTIQNIEVPNQEFGLSETEPGTNFLYAEFDGIMGLAYPSLSVG 190          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPA4_MACFU (Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.064e-21
Identity = 54/126 (42.86%), Postives = 70/126 (55.56%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISN 694
            L N++D +YFG + IGTP+Q FTV+FDTGSSNLWVPS  CY S+                     + +I YGTG+++G    D VKVG +   NQ F  +  E       A FDGILGL +  IS+
Sbjct:   68 LENYLDVEYFGTIGIGTPAQNFTVVFDTGSSNLWVPSVYCY-SLACMDHNLFNPQDSSTYRATSKTVSITYGTGSMTGILGYDTVKVGGISDTNQIFGLSETEPGFFLYFAPFDGILGLAYPSISS 192          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPC_SORUN (Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.094e-21
Identity = 50/124 (40.32%), Postives = 75/124 (60.48%), Query Frame = 2
Query:  326 FMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNG 697
            ++DA YFGE+SIGTP Q F V+FDTGSSNLWVPS  C  S                   NG + ++QYG+G+++GFF  D + + ++ V +Q+F  +  E    F+ A+FDGI+G+ +  ++ G
Sbjct:   68 YLDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTGHARFNPSKSSTYSTNGQTFSLQYGSGSLTGFFGYDTMTLQNIKVPHQEFGLSQNEPGENFVYAQFDGIMGMAYPTLAMG 190          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPA_CHICK (Pepsin A OS=Gallus gallus GN=PGA PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.094e-21
Identity = 57/126 (45.24%), Postives = 68/126 (53.97%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISN 694
            + N+MDA Y+G +SIGTP Q F+VIFDTGSSNLWVPS  C  S                   N T   I YGTG++SG    D V V  + V+NQ F  +  E    F    FDGILGL F  IS+
Sbjct:   51 MTNYMDASYYGTISIGTPQQDFSVIFDTGSSNLWVPSIYCKSSACSNHKRFDPSKSSTYVSTNET-VYIAYGTGSMSGILGYDTVAVSSIDVQNQIFGLSETEPGSFFYYCNFDGILGLAFPSISS 175          
The following BLAST results are available for this feature:
BLAST of DR403294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
PEPC_SUNMU1.641e-2241.94Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2[more]
PEPC_RHIFE2.143e-2241.94Gastricsin OS=Rhinolophus ferrumequinum GN=PGC PE=... [more]
PEPA3_RABIT2.799e-2238.51Pepsin-3 OS=Oryctolagus cuniculus PE=2 SV=1[more]
CATE_HUMAN2.799e-2245.45Cathepsin E OS=Homo sapiens GN=CTSE PE=1 SV=2[more]
ASP3_CAEEL3.655e-2242.76Aspartic protease 3 OS=Caenorhabditis elegans GN=a... [more]
PEPC_CAVPO8.143e-2241.60Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1[more]
PEPC_RABIT1.064e-2141.60Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV... [more]
PEPA4_MACFU1.064e-2142.86Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]
PEPC_SORUN3.094e-2140.32Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1[more]
PEPA_CHICK3.094e-2145.24Pepsin A OS=Gallus gallus GN=PGA PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244H22 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244H22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403294 ID=DR403294; Name=DR403294; organism=Citrus sinensis; type=EST; length=700bp
GGGGTCGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTGTCTGTGCT
CTTTTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATT
CGGGCTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTT
GCCAAATGATGGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGGTC
AGATCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGACG
AGAACACCTGTCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGA
TACTGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGG
AGGTTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACA
GGAAGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTC
TTGCTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAA
GGAATGGGACATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGT
TTCTTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCA
GGATTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCA
AGTTTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAAATGGAAAA
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