DR403294

Overview
NameDR403294
Unique NameDR403294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6928 contig Csv1_Contig6928:11..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CHYM_CALJA (Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21
Identity = 70/190 (36.84%), Postives = 97/190 (51.05%), Query Frame = 2
Query:  137 AAFALPN-DGLVRIGLRKKKLGQINRLVGQTVSKEEETTRTPVRRYNLHGSLGDSDTDIVA---LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISN 694
            A FAL    G+VRI L K K   + R +     KE       ++ +    S   S++  VA   L N++D QYFG++ IGTP Q FTV+FDTGSS+LWVPS  C  SV                     S +IQYGTG++ G    D V V  +V  +Q    +T+E    F  ++FDGILGL +  +++
Sbjct:    9 AVFALSQASGIVRIPLHKGK--SLRRAL-----KERGLLEDFLKNHQHAVSRKHSNSREVASEFLTNYLDCQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSVYCN-SVACQNHHRFDPSKSSTFQNMDKSLSIQYGTGSMQGLLGYDTVTVSSIVDPHQTVGLSTQEPGDVFTYSEFDGILGLAYPSLAS 190          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPE_CHICK (Embryonic pepsinogen OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.536e-20
Identity = 68/185 (36.76%), Postives = 92/185 (49.73%), Query Frame = 2
Query:  155 NDGLVRIGL-RKKKLGQINRLVGQTVSKEEETTRTPVRRYNLHGSLGDSDTDIVA-----LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            +DG+ R+ L R KKL +I R  G      +        RY++      +  D++      L N +D +Y+G +SIGTP Q FTV+FDTGSSNLWVPS  C  S                    G + +I YGTG + G    D V V  L+  NQ F  +T E    F+  KFDGILGLG+  ++
Sbjct:   14 SDGITRLPLERGKKLREILREKGLLHHFLQH------HRYDIGTKFPHAFPDVLTVVTEPLLNTLDMEYYGTISIGTPPQDFTVVFDTGSSNLWVPSVSC-TSPACQSHQMFNPSQSSTYKSTGQNLSIHYGTGDMEGTVGCDTVTVASLMDTNQLFGLSTSEPGQFFVYVKFDGILGLGYPSLA 191          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPA_BOVIN (Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.006e-20
Identity = 68/180 (37.78%), Postives = 91/180 (50.56%), Query Frame = 2
Query:  164 LVRIGLRKKKLGQINRLVGQTVSKEEETTRTPVRRYNLHGSLGDSDTDIVA---LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISN 694
            +V+I L KKK  + N +      K +E  RT   +YNL          +V+   L N++D +YFG + IGTP+Q FTVIFDTGSSNLWVPS  C  S                      + +I YGTG+++G    D V+VG +   NQ F  +  E       A FDGILGL +  IS+
Sbjct:    3 VVKIPLVKKKSLRQNLIEN---GKLKEFMRT--HKYNLGSKYIREAATLVSEQPLQNYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSIYC-SSEACTNHNRFNPQDSSTYEATSETLSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISS 176          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPA_MACMU (Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.421e-20
Identity = 54/126 (42.86%), Postives = 69/126 (54.76%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISN 694
            L N++D +YFG + IGTP+Q FTVIFDTGSSNLWVPS  C                      +GT  +I YGTG+++G    D V+VG +   NQ F  +  E       A FDGILGL +  IS+
Sbjct:   68 LENYLDVEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACTNHNLFNPQDSSTYQSTSGT-LSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISS 192          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPA2_MACFU (Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.421e-20
Identity = 54/126 (42.86%), Postives = 69/126 (54.76%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISN 694
            L N++D +YFG + IGTP+Q FTVIFDTGSSNLWVPS  C                      +GT  +I YGTG+++G    D V+VG +   NQ F  +  E       A FDGILGL +  IS+
Sbjct:   68 LENYLDMEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACTNHNRFNPQDSSTYQSTSGT-VSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISS 192          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPA1_MACFU (Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.421e-20
Identity = 54/126 (42.86%), Postives = 69/126 (54.76%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISN 694
            L N++D +YFG + IGTP+Q FTVIFDTGSSNLWVPS  C                      +GT  +I YGTG+++G    D V+VG +   NQ F  +  E       A FDGILGL +  IS+
Sbjct:   68 LENYLDVEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACTNHNLFNPQDSSTYQSTSGT-LSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISS 192          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPA_CANFA (Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.836e-20
Identity = 54/126 (42.86%), Postives = 67/126 (53.17%), Query Frame = 2
Query:  314 ALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            +L N+MD +YFG + IGTP Q FTVIFDTGSSNLWVPS  C                      N    +I YGTG+++G    D V+VG +   NQ F  +  E       A FDGILGL + +IS
Sbjct:   65 SLKNYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYCSSPACSNHNRFNPQESSTYQGTN-RPVSIAYGTGSMTGILGYDTVQVGGIADTNQIFGLSETEPGSFLYYAPFDGILGLAYPQIS 189          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPA_HUMAN (Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.954e-20
Identity = 52/126 (41.27%), Postives = 69/126 (54.76%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISN 694
            L N++D +YFG + IGTP+Q FTV+FDTGSSNLWVPS  C  S+                     + +I YGTG+++G    D V+VG +   NQ F  +  E       A FDGILGL +  IS+
Sbjct:   68 LENYLDMEYFGTIGIGTPAQDFTVVFDTGSSNLWVPSVYC-SSLACTNHNRFNPEDSSTYQSTSETVSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISS 192          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PAG2_PIG (Pregnancy-associated glycoprotein 2 OS=Sus scrofa GN=PAG2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.954e-20
Identity = 52/125 (41.60%), Postives = 68/125 (54.40%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            L N++D  Y G +SIGTP Q F+V+FDTGSS+LWVPS  C                     R G S  ++YG+G +SGF  QD V++G L    Q F  + +E    F  A FDGILGL +  I+
Sbjct:   68 LRNYLDMVYVGNISIGTPPQQFSVVFDTGSSDLWVPSIYCKSKACVTHRSFNPSHSSTFHDR-GKSIKLEYGSGKMSGFLGQDTVRIGQLTSTGQAFGLSKEETGKAFEHAIFDGILGLAYPSIA 191          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPA_PIG (Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.300e-19
Identity = 53/125 (42.40%), Postives = 67/125 (53.60%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            L N++D +YFG + IGTP+Q FTVIFDTGSSNLWVPS  C  S+                       +I YGTG+++G    D V+VG +   NQ F  +  E       A FDGILGL +  IS
Sbjct:   65 LENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-SSLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSIS 188          
The following BLAST results are available for this feature:
BLAST of DR403294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
CHYM_CALJA9.003e-2136.84Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1[more]
PEPE_CHICK1.536e-2036.76Embryonic pepsinogen OS=Gallus gallus PE=2 SV=1[more]
PEPA_BOVIN2.006e-2037.78Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2[more]
PEPA_MACMU3.421e-2042.86Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1[more]
PEPA2_MACFU3.421e-2042.86Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1[more]
PEPA1_MACFU3.421e-2042.86Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]
PEPA_CANFA5.836e-2042.86Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1[more]
PEPA_HUMAN9.954e-2041.27Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1[more]
PAG2_PIG9.954e-2041.60Pregnancy-associated glycoprotein 2 OS=Sus scrofa ... [more]
PEPA_PIG1.300e-1942.40Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAF-PNP1244H22 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244H22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403294 ID=DR403294; Name=DR403294; organism=Citrus sinensis; type=EST; length=700bp
GGGGTCGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTGTCTGTGCT
CTTTTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATT
CGGGCTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTT
GCCAAATGATGGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGGTC
AGATCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGACG
AGAACACCTGTCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGA
TACTGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGG
AGGTTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACA
GGAAGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTC
TTGCTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAA
GGAATGGGACATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGT
TTCTTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCA
GGATTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCA
AGTTTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAAATGGAAAA
back to top