DR403294

Overview
NameDR403294
Unique NameDR403294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6928 contig Csv1_Contig6928:11..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPA_RHIFE (Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.896e-19
Identity = 52/126 (41.27%), Postives = 66/126 (52.38%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISN 694
            L N+MD +YFG + IGTP Q FTVIFDTGSSNLWVPS  C                      N    ++ YGTG+++G    D V+VG +   NQ F  +  E       A FDGILGL +  I++
Sbjct:   66 LENYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYCSSPACSNHNRFNPQQSSTYQGTN-QKLSVAYGTGSMTGILGYDTVQVGGITDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSIAS 190          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPA_CALJA (Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.896e-19
Identity = 64/179 (35.75%), Postives = 89/179 (49.72%), Query Frame = 2
Query:  164 LVRIGLRKKKLGQINRLVGQTVSKE--EETTRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISN 694
            L ++ L KKK  + N L+   + K+  +  T  P  +Y   G       +   L N++D +YFG + IGTP+Q FTVIFDTGSSNLWVPS  C  S                      + +I YGTG+++G    D V+VG +   NQ F  +  E       + FDGILGL +  IS+
Sbjct:   16 LYKVSLIKKKSLRKN-LIEHGLLKDFLKNNTLDPASKYFPQGEAATMIAN-QPLVNYLDMEYFGTIGIGTPAQEFTVIFDTGSSNLWVPSIYC-SSPACTNHNRFNPQESSTYQATSQTLSIAYGTGSMTGILGYDTVQVGGIADTNQIFGLSETEPGSFLYYSPFDGILGLAYPSISS 191          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPC_MONDO (Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.783e-19
Identity = 49/127 (38.58%), Postives = 71/127 (55.91%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISNG 697
            + N++D+ YFGE+SIGTP Q F V+FDTGSSNLWVPS  C  S                    G +  + YG+G+++     D V V ++VV NQ+F  +  E +  F  + FDGILG+ +  ++ G
Sbjct:   67 ITNYLDSFYFGEISIGTPPQNFLVLFDTGSSNLWVPSTYCQ-SQACSNHNRFSPSQSSTFTNGGQTYTLSYGSGSLTVVLGYDTVTVQNIVVSNQEFGLSESEPTSPFYYSDFDGILGMAYPAMAVG 192          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPA_SORUN (Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.101e-18
Identity = 53/126 (42.06%), Postives = 67/126 (53.17%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISN 694
            L N+MD +YFG +SIGTP Q FTVIFDTGSSNLWVPS  C  S                      + +I YGTG+++G    D V+V  +   NQ F  +  E       + FDGILGL +  IS+
Sbjct:   67 LVNYMDMEYFGTISIGTPPQEFTVIFDTGSSNLWVPSIYC-SSPACSNHNRFDPQKSSTFKPTSQTVSIAYGTGSMTGVLGYDTVQVAGIADTNQIFGLSQSEPGSFLYYSPFDGILGLAYPSISS 191          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CHYM_SHEEP (Chymosin OS=Ovis aries GN=CYM PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.877e-18
Identity = 50/135 (37.04%), Postives = 73/135 (54.07%), Query Frame = 2
Query:  290 GDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISN 694
            G  +   V L N++D+QYFG++ +GTP Q FTV+FDTGSS+ WVPS  C  S                    G   +I+YGTG++ G    D V V ++V   Q    +T+E    F  A+FDGILG+ +  +++
Sbjct:   57 GFGEVASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIRYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAYPSLAS 190          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CHYM_BOVIN (Chymosin OS=Bos taurus GN=CYM PE=1 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 2.452e-18
Identity = 50/135 (37.04%), Postives = 72/135 (53.33%), Query Frame = 2
Query:  290 GDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISN 694
            G  +   V L N++D+QYFG++ +GTP Q FTV+FDTGSS+ WVPS  C  S                    G   +I YGTG++ G    D V V ++V   Q    +T+E    F  A+FDGILG+ +  +++
Sbjct:   57 GFGEVASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAYPSLAS 190          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PAG_HORSE (Pregnancy-associated glycoprotein OS=Equus caballus GN=PAG PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.202e-18
Identity = 51/133 (38.35%), Postives = 68/133 (51.13%), Query Frame = 2
Query:  293 DSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            DS      + N++D  Y G +S+GTP Q F VIFDTGS++LWVPS  C  S                   +G    + YGTG +SGF   D +K+  LV +NQ F  + +E       A FDGILGL +  +S
Sbjct:   58 DSGVAFEPMRNYLDIAYMGIISVGTPPQEFQVIFDTGSADLWVPSIYC-SSPACSNHNTFNPLRSSTFVASGQPIKLIYGTGKMSGFVGYDTIKISSLVDRNQAFGLSVEEPDKILELATFDGILGLSYPSLS 189          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PLM2_PLAFA (Plasmepsin-2 OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.134e-18
Identity = 52/136 (38.24%), Postives = 76/136 (55.88%), Query Frame = 2
Query:  296 SDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEA--TKEASITFLAAKFDGILGLGFQEISNG 697
            S  D + L +F +  ++G+  +G   Q FT I DTGS+NLWVPS KC  +                  ++GT   + Y +G +SGFFS+D V VG+L +  + FIE   T     T+ A+ FDGILGLG++++S G
Sbjct:  125 SSNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKC-TTAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSGTVSGFFSKDLVTVGNLSLPYK-FIEVIDTNGFEPTYTASTFDGILGLGWKDLSIG 258          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPA_SUNMU (Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 7.134e-18
Identity = 51/126 (40.48%), Postives = 66/126 (52.38%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISN 694
            L N+MD +YFG + IGTP Q FTVIFDTGSSNLWVPS  C  S                      + +I YGTG+++G    D V+V  +   NQ F  +  E       + FDGILGL +  I++
Sbjct:   67 LVNYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYC-SSPACSNHNRFNPQKSSTFQSTSQTLSIAYGTGSMTGVLGYDTVQVAGIADTNQIFGLSQTEPGSFLYYSPFDGILGLAYPNIAS 191          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PAG2_BOVIN (Pregnancy-associated glycoprotein 2 OS=Bos taurus GN=PAG2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.134e-18
Identity = 59/159 (37.11%), Postives = 76/159 (47.80%), Query Frame = 2
Query:  233 KEEETTRTPVRRYNLHG----------SLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGF 679
            K+ +T R  +R  NL            S  DS   I  L N++D  Y G ++IGTP Q F V+FDTGS+NLWVP   C  S                    G+   I YG+G I GF   D V++G+LV   Q F  + +E    F +  FDGILGL F
Sbjct:   22 KKMKTLRETLREKNLLNNFLEEQAYRLSKNDSKITIHPLRNYLDTAYVGNITIGTPPQEFRVVFDTGSANLWVPCITC-TSPACYTHKTFNPQNSSSFREVGSPITIFYGSGIIQGFLGSDTVRIGNLVSPEQSFGLSLEEYG--FDSLPFDGILGLAF 177          
The following BLAST results are available for this feature:
BLAST of DR403294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
PEPA_RHIFE2.896e-1941.27Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 ... [more]
PEPA_CALJA2.896e-1935.75Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1[more]
PEPC_MONDO3.783e-1938.58Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV... [more]
PEPA_SORUN1.101e-1842.06Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1[more]
CHYM_SHEEP1.877e-1837.04Chymosin OS=Ovis aries GN=CYM PE=2 SV=1[more]
CHYM_BOVIN2.452e-1837.04Chymosin OS=Bos taurus GN=CYM PE=1 SV=3[more]
PAG_HORSE3.202e-1838.35Pregnancy-associated glycoprotein OS=Equus caballu... [more]
PLM2_PLAFA7.134e-1838.24Plasmepsin-2 OS=Plasmodium falciparum PE=1 SV=1[more]
PEPA_SUNMU7.134e-1840.48Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2[more]
PAG2_BOVIN7.134e-1837.11Pregnancy-associated glycoprotein 2 OS=Bos taurus ... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244H22 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244H22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403294 ID=DR403294; Name=DR403294; organism=Citrus sinensis; type=EST; length=700bp
GGGGTCGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTGTCTGTGCT
CTTTTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATT
CGGGCTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTT
GCCAAATGATGGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGGTC
AGATCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGACG
AGAACACCTGTCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGA
TACTGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGG
AGGTTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACA
GGAAGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTC
TTGCTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAA
GGAATGGGACATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGT
TTCTTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCA
GGATTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCA
AGTTTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAAATGGAAAA
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