DR403294

Overview
NameDR403294
Unique NameDR403294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6928 contig Csv1_Contig6928:11..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CARDG_CYNCA (Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18
Identity = 58/133 (43.61%), Postives = 66/133 (49.62%), Query Frame = 2
Query:  293 DSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            DS + +VAL N  D  YFGE+ IGTP Q FTVIFDTGSS LWVPS+K +                                   S + S D+        K QDFIEAT+EA   FL   FDGILGL FQ IS
Sbjct:    1 DSGSTVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSYLWVPSSKAH-----------------------------------SMYESSDS-----STYKEQDFIEATEEADNVFLNRLFDGILGLSFQTIS 93          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PLM1_PLAFA (Plasmepsin-1 OS=Plasmodium falciparum PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.217e-17
Identity = 53/141 (37.59%), Postives = 77/141 (54.61%), Query Frame = 2
Query:  281 GSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASI--TFLAAKFDGILGLGFQEISNG 697
            G+ GDS    V LN+  +  Y+GE  IG   Q F  IFDTGS+NLWVPSA+C  ++                 ++GT   + Y +G +SGFFS+D V + +L    + FIE T        +   +FDGI+GLG++++S G
Sbjct:  123 GNAGDS----VTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN-TIGCKTKNLYDSNKSKTYEKDGTKVEMNYVSGTVSGFFSKDIVTIANLSFPYK-FIEVTDTNGFEPAYTLGQFDGIVGLGWKDLSIG 257          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PLM1_PLAF7 (Plasmepsin-1 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0076 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.217e-17
Identity = 53/141 (37.59%), Postives = 77/141 (54.61%), Query Frame = 2
Query:  281 GSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASI--TFLAAKFDGILGLGFQEISNG 697
            G+ GDS    V LN+  +  Y+GE  IG   Q F  IFDTGS+NLWVPSA+C  ++                 ++GT   + Y +G +SGFFS+D V + +L    + FIE T        +   +FDGI+GLG++++S G
Sbjct:  123 GNAGDS----VTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN-TIGCKTKNLYDSNKSKTYEKDGTKVEMNYVSGTVSGFFSKDIVTIANLSFPYK-FIEVTDTNGFEPAYTLGQFDGIVGLGWKDLSIG 257          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPB_CANFA (Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17
Identity = 45/123 (36.59%), Postives = 67/123 (54.47%), Query Frame = 2
Query:  323 NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            N++D+ YFGE+SIGTP Q F ++FDTGSSNLWVPS  C  S                   +  +  + YG G+++     D V V ++V+ NQ F  +  E +  F  + FDGILG+ +  ++
Sbjct:   68 NYLDSYYFGEISIGTPPQNFLILFDTGSSNLWVPSTYCQ-SQACSNHNRFNPSRSSTYQSSEQTYTLAYGFGSLTVLLGYDTVTVQNIVIHNQLFGMSENEPNYPFYYSYFDGILGMAYSNLA 189          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CARDH_CYNCA (Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.030e-16
Identity = 57/133 (42.86%), Postives = 63/133 (47.37%), Query Frame = 2
Query:  293 DSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            DS + +VAL N  D  YFGE+ IGTP Q FTVIFDTGSS LWVPS+K +                                   S + S      G    K QDFIEAT E    FL   FDGILGL FQ IS
Sbjct:    1 DSGSAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKAH-----------------------------------SMYESS-----GSSTYKEQDFIEATDETDNVFLHRLFDGILGLSFQTIS 93          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEP2B_GADMO (Pepsin-2B OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.345e-16
Identity = 49/125 (39.20%), Postives = 64/125 (51.20%), Query Frame = 2
Query:  317 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            + N  D +Y+G +SIGTP ++F VIFDTGSSNLWV S+ C  +                    G +  + YGTG + G   QD V VG     NQ+  E+  E      AA FDGILGL +  I+
Sbjct:    6 MKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHC-SAQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMRGILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIA 129          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PEPAF_RABIT (Pepsin F OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.914e-16
Identity = 52/141 (36.88%), Postives = 68/141 (48.23%), Query Frame = 2
Query:  269 YNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            Y L     D D     L N++D  Y G +SIGTP Q F V+ DTGS++LWVPS  C  S                   +G    I YG+G +SGF + D V++  LV   Q F  + +E       A FDGILGL +  +S
Sbjct:   50 YKLLSGQQDPDVSFEPLRNYLDLAYIGIISIGTPPQEFKVVLDTGSADLWVPSIYC-SSPACGKHNTFNPLLSSTFLVSGRPINIVYGSGRMSGFLAYDTVQIAGLVDVAQAFGLSLQEPGKFMEYAVFDGILGLSYPSLS 189          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PAG1_PIG (Pregnancy-associated glycoprotein 1 OS=Sus scrofa GN=PAG1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.112e-16
Identity = 48/144 (33.33%), Postives = 72/144 (50.00%), Query Frame = 2
Query:  260 VRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            ++++ L GSL       + L N++D  Y G ++IGTP Q F+VIFDT SS+LWVPS +C+                     N T     + +G +SG    D V++G    +NQ F  +  E       A FDG+LGLG+  ++
Sbjct:   49 IQKFGLKGSLCSPKISCLRLWNYLDMVYVGNITIGTPPQLFSVIFDTASSDLWVPSNQCHSRACVTHRSFNPTLSSTFQSSNRTVKLAPH-SGLVSGLLGYDTVQIGRFKSENQAFGLSQSEPVKELENAFFDGVLGLGYPSLA 191          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: CARP_RHICH (Rhizopuspepsin OS=Rhizopus chinensis PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 51/153 (33.33%), Postives = 80/153 (52.29%), Query Frame = 2
Query:  260 VRRYNLH-------GSLGDSDTDIVALNNF-MDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAAIQYGTG-AISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            + +YN H       G + D+    V + ++  D +Y+G+V+IGTP + F + FDTGSS+LW+ S  C  +                   +G + +I YG G + SG  ++DNV +G L++K Q  IE  K  + +F     DG+LGLGF  I+
Sbjct:   50 IAKYNKHKINTSTGGIVPDAGVGTVPMTDYGNDVEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLC--TNCGSRQTKYDPKQSSTYQADGRTWSISYGDGSSASGILAKDNVNLGGLLIKGQT-IELAKREAASFANGPNDGLLGLGFDTIT 199          
BLAST of DR403294 vs. ExPASy Swiss-Prot
Match: PAG1_SHEEP (Pregnancy-associated glycoprotein 1 OS=Ovis aries GN=PAG1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.642e-15
Identity = 51/134 (38.06%), Postives = 68/134 (50.75%), Query Frame = 2
Query:  296 SDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGTSAA--IQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 691
            S+  I  L N MD  Y G ++IGTP Q F V+FDTGSS+L VPS  C                        T+    I +G+G + GF + D V++GDLV  +Q F     E   ++L   FDGILGL + +IS
Sbjct:   56 SNLTIHPLRNIMDMLYVGNITIGTPPQEFQVVFDTGSSDLLVPSINCLSPTKRPCSKQDKFKHHQSSTFRFTNDTFRIYFGSGTMRGFVAHDTVRIGDLVSTDQPFGLIFLE---SWLDIPFDGILGLNYPKIS 186          
The following BLAST results are available for this feature:
BLAST of DR403294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
CARDG_CYNCA9.317e-1843.61Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 ... [more]
PLM1_PLAFA1.217e-1737.59Plasmepsin-1 OS=Plasmodium falciparum PE=1 SV=2[more]
PLM1_PLAF71.217e-1737.59Plasmepsin-1 OS=Plasmodium falciparum (isolate 3D7... [more]
PEPB_CANFA6.039e-1736.59Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1[more]
CARDH_CYNCA1.030e-1642.86Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 ... [more]
PEP2B_GADMO1.345e-1639.20Pepsin-2B OS=Gadus morhua PE=1 SV=1[more]
PEPAF_RABIT3.914e-1636.88Pepsin F OS=Oryctolagus cuniculus PE=2 SV=1[more]
PAG1_PIG5.112e-1633.33Pregnancy-associated glycoprotein 1 OS=Sus scrofa ... [more]
CARP_RHICH3.314e-1533.33Rhizopuspepsin OS=Rhizopus chinensis PE=1 SV=2[more]
PAG1_SHEEP9.642e-1538.06Pregnancy-associated glycoprotein 1 OS=Ovis aries ... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244H22 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244H22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403294 ID=DR403294; Name=DR403294; organism=Citrus sinensis; type=EST; length=700bp
GGGGTCGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTGTCTGTGCT
CTTTTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATT
CGGGCTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTT
GCCAAATGATGGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGGTC
AGATCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGACG
AGAACACCTGTCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGA
TACTGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGG
AGGTTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACA
GGAAGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTC
TTGCTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAA
GGAATGGGACATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGT
TTCTTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCA
GGATTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCA
AGTTTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAAATGGAAAA
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