DR403286

Overview
NameDR403286
Unique NameDR403286
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length756
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403286 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36
Identity = 78/167 (46.71%), Postives = 104/167 (62.28%), Query Frame = 2
Query:   62 SDVKVLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGW 562
            ++V +L FS S F MR RIAL +K ++YE  EENL  KS LLL+ NPVHKKIP+LIHN KP+CESL I+EY+DE W    P +LPSDPY R+ ARFWA Y+D K +S  R + S  G + ++A             +        K +FGG+ +GF+D+A   +  W
Sbjct:    4 NNVVLLDFSGSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCP-LLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGEL-----GNKTYFGGDNLGFVDVALVPFTSW 164          
BLAST of DR403286 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.270e-36
Identity = 83/213 (38.97%), Postives = 118/213 (55.40%), Query Frame = 2
Query:   65 DVKVLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANG---AEAKKAAXXXXXXXXXXXXDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMPETDKL 694
            +V +L    S + MRARIAL  K V YE+ EENL ++S LLL+ NP+HKKIPVLIHN KP+CES IIV+Y+DE W+   P ++PSDPY R+ ARFW  Y+D+K +   + +  + G    E KK              D        KPF+G +  GF+D+   ++  W    E     K+  E + P L+ W +R      V + +P+  K+
Sbjct:    4 EVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSP-LMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGKKELISIFKQLEETLTD--------KPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKM--EEECPKLMAWVKRCMERETVSNTLPDAKKV 205          
BLAST of DR403286 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.392e-32
Identity = 80/215 (37.21%), Postives = 117/215 (54.42%), Query Frame = 2
Query:   65 DVKVLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKPFFGGNQIGFLDIAFGSYL------GWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMPETDK 691
            +VK+LG   SPF  R  +ALK+K + YE++EE L +KS LLL  NP+HKK+PVL+HN K + ES +I+EY+DE W  +   ILP DPY+R+ ARF+A  VDE+    + ++G  + A A +                  K   GK +FGG  +GFLD   GS +      GW  +      ++++ E K P   +W         VKD +P  ++
Sbjct:    6 EVKLLGIWASPFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQN--PILPQDPYERSKARFFAKLVDEQ----IMNVGFISMARADEKGREVLAEQVRELIMYLEKELVGKDYFGGKTVGFLDFVAGSLIPFCLERGWEGI-----GLEVITEEKFPEFKRWVRNLEKVEIVKDCVPPREE 209          
BLAST of DR403286 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.290e-27
Identity = 77/220 (35.00%), Postives = 114/220 (51.82%), Query Frame = 2
Query:   65 DVKVLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILP-------SDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKPFF---GGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMPETDKL 694
            ++ +L F  SPF  R RIA+  K +E+E+ EE+LG+KS+LLL+SNPVH+KIPVL+H  +PV ESL+I++Y+D+A+  + P +LP          Y RA ARFWA YVD K +     +    G     A             +        + FF   GG ++GF+D+A   +  W    E+     +  E   P L  WA R     +V   +P  +K+
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGT-PHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAEL-----GDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARRCGRIDSVVKHLPSPEKV 217          
BLAST of DR403286 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.290e-27
Identity = 75/219 (34.25%), Postives = 114/219 (52.05%), Query Frame = 2
Query:   65 DVKVLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSD------PYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKPFF---GGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMPETDKL 694
            ++ +L F  SPF  R RIA+  K +E+E+ EE+LG+KS+LLL+SNPVH+KIPVL+H  +PV ESL+I++Y+D+A+  +   + P++       Y RA ARFWA YVD K +     +    G     A             +        + FF   GG ++GF+D+A   +  W    E+     +  E   P L  WA R     +V   +P  +K+
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAEL-----GDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARRCGRIDSVAKHLPSPEKV 217          
The following BLAST results are available for this feature:
BLAST of DR403286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTX1_NICPL1.331e-3646.71Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTX3_SOYBN2.270e-3638.97Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTXA_ARATH3.392e-3237.21Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTU1_ORYSJ4.290e-2735.00Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI4.290e-2734.25Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244H13 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244H13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403286 ID=DR403286; Name=DR403286; organism=Citrus sinensis; type=EST; length=756bp
GGGGATTTCATTTCAGTTCCTTGAGCAGAGCTTAGAGAGAAAAAAAAAGA
AAATGNNNAAAAGTGACGTGAAGGTTTTGGGTTTTTCGCCAAGCCCATTT
GTGATGAGGGCAAGAATCGCACTTAAGATCAAGTCTGTGGAGTATGAGTT
TCTGGAGGAGAATTTGGGATCCAAAAGCGAGCTTCTGCTTAAATCAAACC
CTGTTCACAAGAAAATCCCAGTTCTGATTCACAATGATAAGCCTGTTTGC
GAATCTCTCATTATTGTCGAGTACGTGGATGAGGCTTGGTCCTCTTCAGG
TCCCTCTATTCTTCCTTCTGATCCTTATGACCGTGCGGTTGCTCGTTTCT
GGGCCGCTTACGTTGATGAGAAGTGGTTCTCTGCCTTGAGAGACATTGGT
AGTGCAAATGGAGCGGAAGCTAAGAAAGCTGCGATTGAGCAATTGATTGA
AGTCTTGGTTTTGCTGGAGGACGCTTTTGTTAAGTGTAGCAAAGGGAAGC
CTTTCTTTGGTGGAAACCAAATTGGGTTTCTTGACATTGCATTTGGTAGC
TACTTGGGATGGCTGAGAGTGACAGAGAAAATTAATGAGGTGAAGCTCCT
TGATGAAGTCAAAACTCCTGGACTGTTGAAATGGGCTGAGAGATTCTGTG
CTGACGCTGCTGTCAAAGATGTTATGCCTGAGACCGATAAGCTTGCCAAA
CTCAGAGCTTCTGCTCCACCTTCCAGCTGATTTAAGCTAAATACTGGACA
TTAGTC
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