DR403282
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_PYRKO (50S ribosomal protein L5P OS=Pyrococcus kodakaraensis GN=rpl5p PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.821e-31 Identity = 74/170 (43.53%), Postives = 107/170 (62.94%), Query Frame = 2 Query: 59 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKED----AMKWFQVKYEGV 553 ++PMR+ ++ K+ +NI VGESG+RLT+A +LEQL GQ P+ +A+ T R FGIRR E IA T+RG+KA Q+L+ L+ + +L NF + G F FGIQEHI++ G++YDP GI+GMD V LE +H++TKE+ AM+ + K EG+ Sbjct: 14 AHPMRKPRIAKVTINIGVGESGERLTKAETMLEQLVGQKPIRRRAKQTNRDFGIRRGEPIAVKVTLRGEKAYQMLDRLLEAVDRKLKASNFDEHGNFCFGIQEHINIPGVEYDPEIGIFGMDVCVTLERPGFRVAKRKRQRRKIPTKHKLTKEEGIVFAMEELKAKVEGL 183
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_PYRHO (50S ribosomal protein L5P OS=Pyrococcus horikoshii GN=rpl5p PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.305e-29 Identity = 67/163 (41.10%), Postives = 102/163 (62.58%), Query Frame = 2 Query: 59 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKY 544 ++PMR ++QK+ +NI VGESG+RLT+A +L++L+GQ P+ KA+ T R FGIRR E IA T+RG KA ++L+ L +Y+L +F + G FGI+EHI++ G++YDP GI+GMD V LE +H++TKE+ M + ++ Sbjct: 17 AHPMRRPRIQKVTINIGVGESGERLTKAEIMLQRLTGQKPIRRKAKKTNRDFGIRRGEPIAVKVTLRGPKAYEMLKRLLAAVDYKLKASSFDEHGNVCFGIEEHINIPGVEYDPEIGIFGMDVCVTLERPGFRVARRKRKRARIPTRHKLTKEEGMLYMMEEF 179
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_SULSO (50S ribosomal protein L5P OS=Sulfolobus solfataricus GN=rpl5p PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.476e-29 Identity = 64/159 (40.25%), Postives = 99/159 (62.26%), Query Frame = 2 Query: 62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQ 535 NPMR++K+ K+ +NI +GESGDRL +A ++L++L+G PV++ ++ T+R FGIR+ ++I T+RG +A + L L+ Y L + +F D G FGI EH+ L G +YDP GI+GMD + LE +HRVTKE+AM++ + Sbjct: 14 NPMRKVKLSKVTVNIGLGESGDRLQKAYQLLQELTGAKPVYTISKKTIREFGIRKGQEIGVKVTLRGAQAEEFLRKVLEAIGYRLKKSSFDDYGNVSFGIAEHVILPGARYDPEIGIFGMDIAITLERAGYRISRRRRKKAKIPKRHRVTKEEAMEFLR 172
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_METJA (50S ribosomal protein L5P OS=Methanocaldococcus jannaschii GN=rpl5p PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.476e-29 Identity = 74/178 (41.57%), Postives = 106/178 (59.55%), Query Frame = 2 Query: 62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYE---LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAM----KWFQVKYEGVILNKSQ 571 NPM + +++K+V+N VGESGDRLT+ A+V+E+L+GQ P+ ++A+ T SFGIR+ I T+RG KA + L++ + + E L +F D G F FGI EHID G KYDP GI+GMD V LE +HR+T+E+A+ K F VK E V+L + + Sbjct: 10 NPMLKPRIEKVVVNFGVGESGDRLTKGAQVIEELTGQKPIRTRAKQTNPSFGIRKKLPIGLKVTLRGKKAEEFLKNAFEAFQKEGKKLYDYSFDDYGNFSFGIHEHIDFPGQKYDPMIGIFGMDVCVTLERPGFRVKRRKRCRAKIPRRHRLTREEAIEFIEKTFGVKVERVLLEEEE 187
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_PYRFU (50S ribosomal protein L5P OS=Pyrococcus furiosus GN=rpl5p PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.458e-29 Identity = 67/163 (41.10%), Postives = 100/163 (61.35%), Query Frame = 2 Query: 59 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKY 544 ++PMR +++K+ +NI VGESG+RLT+A +L+QL+GQ P+ KA+ T R FGIRR E IA T+RG KA +LL+ L + L +F + G FGI+EHI++ G++YDP GI+GMD V LE +H++TKE+ M + ++ Sbjct: 17 AHPMRRPRIEKVTINIGVGESGERLTKAEIMLQQLTGQKPIRRKAKKTNRDFGIRRGEPIAVKVTLRGPKAYELLKRLLAAVDNRLKASSFDEHGNVCFGIEEHINIPGVEYDPEIGIFGMDVCVTLERPGFRVARRKRKRAKIPTRHKLTKEEGMVYMMEEF 179
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_PYRAB (50S ribosomal protein L5P OS=Pyrococcus abyssi GN=rpl5p PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.461e-28 Identity = 66/163 (40.49%), Postives = 100/163 (61.35%), Query Frame = 2 Query: 59 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKY 544 ++PMR+ +++K+ +NI VGESG+RLT+A +LE+L+GQ P+ KA+ T R FGIRR E IA T+RG KA ++L+ L + L +F + G FGI EHI++ G++YDP GI+GMD V LE +H++TKE+ M + ++ Sbjct: 17 AHPMRKPRIEKVTINIGVGESGERLTKAEIMLERLTGQKPIRRKAKKTNRDFGIRRGEPIAVKVTLRGPKAYEMLKRLLAAVDNRLKASSFDEHGNVCFGIDEHINIPGVEYDPEIGIFGMDVCVTLERPGFRVARRKRKRAKIPTRHKLTKEEGMVYMMEEF 179
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_AERPE (50S ribosomal protein L5P OS=Aeropyrum pernix GN=rpl5p PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 5.483e-28 Identity = 64/156 (41.03%), Postives = 97/156 (62.18%), Query Frame = 2 Query: 62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLE-XXXXXXXXXXXXXXXXXIQHRVTKEDAM 523 +PMR ++ K+ +NIS+G+SG+RL RAA+VLE+L+GQ PVF KA+ T+R+FG+R+ E IA T+RG+KA+ L+ L + + + + G FGI+EHI + G+KYDP GI GMD + ++ +HRVT+E+ M Sbjct: 25 SPMRRPRIVKVTVNISIGQSGERLQRAAEVLEELTGQKPVFRKAKRTIRAFGVRKGENIAVMVTLRGEKALNFLKRALDAVGHRIKTSSIDEHGNVSFGIEEHILIPGVKYDPRVGILGMDVAITIQRPGHRIVERRRQRRGHIPRRHRVTREETM 180
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_METKA (50S ribosomal protein L5P OS=Methanopyrus kandleri GN=rpl5p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.352e-28 Identity = 68/184 (36.96%), Postives = 108/184 (58.70%), Query Frame = 2 Query: 11 AVTHHQQTRMASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 559 +V + R E SNPMR+ +V K+ +NI VGESGDRL +A ++L++L+GQ PV+++A+ T SFGIRR + I +R ++A++ L+ L + EL F + G FG++EHI L G++YDP GI+GMD V LE +HR+TKE+ + + + +++ +L Sbjct: 2 SVVDEETRRKILEDWESNPMRKPRVGKVTVNIGVGESGDRLQKAYELLQELTGQKPVYTRAKQTNPSFGIRRGQPIGVKVDLRREQAIEFLDWTLDAVDRELHESQFDEFGNVCFGLEEHIALEGVEYDPEIGIFGMDIAVTLERPGFRVMRRRRCRRPVPRRHRLTKEEGIVFMEEEFDVEVL 185
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_METMP (50S ribosomal protein L5P OS=Methanococcus maripaludis GN=rpl5p PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.721e-27 Identity = 67/171 (39.18%), Postives = 99/171 (57.89%), Query Frame = 2 Query: 65 PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLE---SGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNK 565 PM++ ++QK+ +N VGE+GDRLT AKV+E+L+GQ+PV + A+ T +FGIR+ I T+RG KA + L+ + K L +F G F FG+ EHID G KYDPS GIYGMD V E +H VTK++A+++ Q K++ ++ + Sbjct: 11 PMKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAFGIRKKLPIGLKVTLRGKKAEEFLKNAFTAFKACGKTLFASSFDQVGNFSFGVPEHIDFPGQKYDPSVGIYGMDICVTFEKSGYRVKSRKVKRSHIPEKHLVTKDEAIEYIQAKFDTEVVRE 181
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_METBU (50S ribosomal protein L5P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl5p PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.554e-27 Identity = 65/164 (39.63%), Postives = 95/164 (57.93%), Query Frame = 2 Query: 56 LSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKY 544 +SNPMR KV+K+V+++ VGESG L A +LE ++GQT V S A+ T+ +F I++ E I C T+RG+ A LE+ L + E L F G FG++EH D G++YDP+ GI+GMD VV+ H++TKED + +F+ KY Sbjct: 1 MSNPMRNPKVEKVVVHMGVGESGQHLVDAEGILETITGQTVVRSYAKRTLPAFTIKKGEPIGCKVTLRGEAAEGFLETSLGIVEKRLNESQFDIFGNVSFGVEEHTDYPGMRYDPNIGIFGMDITVVVNRPGYRVSKRRIAKRKIPTSHKITKEDTISFFKDKY 164 The following BLAST results are available for this feature:
BLAST of DR403282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403282 ID=DR403282; Name=DR403282; organism=Citrus sinensis; type=EST; length=679bpback to top |