DR403282
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_SULAC (50S ribosomal protein L5P OS=Sulfolobus acidocaldarius GN=rpl5p PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.674e-25 Identity = 60/172 (34.88%), Postives = 97/172 (56.40%), Query Frame = 2 Query: 47 EKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 559 E K N MR + + K+ +NI VGESG+RL +A +++++L+G PV++K R ++R FG+R+ I AT+R A++ L+ L + L + +F + G FGI EH+ + G +YDP GI+GMD + L +HRVTKE+A+ + + + IL Sbjct: 5 EAKKENVMRRVVLDKVTVNIGVGESGERLQKAYQLVQELTGVKPVYTKGRKSIREFGVRKGAPIGVKATLRRQAAVEFLKKVLPAVNFRLKQSSFDNYGNVSFGIAEHVLIPGTRYDPEIGIFGMDVAITLVRPGYRTMKRKRKKASIPRRHRVTKEEAINFMKENFNVTIL 176
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_NANEQ (50S ribosomal protein L5P OS=Nanoarchaeum equitans GN=rpl5p PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.674e-25 Identity = 62/162 (38.27%), Postives = 101/162 (62.35%), Query Frame = 2 Query: 56 LSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLL-ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQ 535 + +PMR+I+++K+ LNI VGESG++L +A ++L++L+GQ PV +KA+ V + IR I T+RG+KA ++L E L ++++ +F+D G FGFGI E+I + G+KYDP G+ G++ +V LE +HR+ KE+ +KW Q Sbjct: 1 MEHPMRKIRIEKVTLNIGVGESGEKLDKAYELLKRLTGQKPVKTKAKVRVEQWHIRPGLPIGVKVTLRGEKAYKILKEKLLPAVDFKIKASSFTDRG-FGFGIPEYIMIPGMKYDPELGLIGLEAYVTLERPGYRVERRRIKRSKVGSRHRLNKEEIIKWAQ 161
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_SULTO (50S ribosomal protein L5P OS=Sulfolobus tokodaii GN=rpl5p PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.264e-24 Identity = 60/176 (34.09%), Postives = 102/176 (57.95%), Query Frame = 2 Query: 38 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHR-VTKEDAMKWFQVKYEGVIL 559 M +E + NPMR+++++K+ +NI VGE+G+RL +A ++L++L+G PV++ A+ T+R FG+R+ I T+RG KA + L L + + +F + G FGI EH+ + G +YDP GI+GMD + L +HR V+KE+AM++ + + I+ Sbjct: 1 MMAETQTVNPMRKLRLEKVTVNIGVGEAGERLQKAYQLLQELTGVKPVYTIAKRTIREFGVRKGAPIGVKVTLRGKKAEEFLNKVLAAVGHRIKASSFDEYGNVSFGIAEHVLIPGTRYDPEIGIFGMDVAITLVRPGFRVARRRRKKAHIPKRHRTVSKEEAMEFLKQNFNVTIV 176
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_METB6 (50S ribosomal protein L5P OS=Methanoregula boonei (strain 6A8) GN=rpl5p PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.273e-24 Identity = 56/160 (35.00%), Postives = 90/160 (56.25%), Query Frame = 2 Query: 68 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKY 544 MR++ + K+V+++ VGESG++L +A +++ ++ QTP+ S A+ T +F IR+ I C T+RG A +++ L + + F +G F FGI+EH D G+ YDP GI+GMD VVLE + RV KEDA+ + + +Y Sbjct: 1 MRDVHIDKVVVHMGVGESGEKLVKAENIMKTITKQTPIRSVAKMTQPAFNIRKGAPIGCKVTLRGKPAEDFIKTSLNIVNKTIFESQFDKSGNFSFGIEEHTDFPGMSYDPQIGIFGMDINVVLERNGIRITRRRMQKKKLPEKQRVKKEDAIAFLKKEY 160
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_METST (50S ribosomal protein L5P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl5p PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.193e-24 Identity = 61/166 (36.75%), Postives = 91/166 (54.82%), Query Frame = 2 Query: 62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVI 556 N M++ + K +NI VGE G++LTRA K++E L Q PV + ++ T FGIR+ + IAC T+RG+KA +++ L E + F G FGI+EHID+ G+KYDP GI+GMD V + RVTKE++M++ + + I Sbjct: 2 NVMQKPFIAKATINIGVGEGGEKLTRAEKLIETLVDQKPVRTYSKVTNPEFGIRKKQPIACKVTLRGEKADKIISMVLSGLENRIKASQFDKEGNVSFGIREHIDIPGVKYDPDIGIFGMDVSVTFQKPGHRIKERRLRPKKLPQAQRVTKEESMEYMKENFNVTI 167
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_METAC (50S ribosomal protein L5P OS=Methanosarcina acetivorans GN=rpl5p PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.193e-24 Identity = 60/160 (37.50%), Postives = 88/160 (55.00%), Query Frame = 2 Query: 68 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKY 544 MR V+K+++++ VGESG L A +L ++GQ V A+ T+ +F I++NE I C T+RG KA + LE+ L + E L R F G FGI+EH D G++YDP+ G++GMD VVL+ HRVT +DA+ + Y Sbjct: 1 MRTPIVEKVIVHMGVGESGQHLVNAEDILRNITGQEVVRCFAKRTLPAFSIKKNEPIGCKVTLRGQKAQEFLETALGIVEKTLNRSQFDSFGNVSFGIEEHTDFPGMRYDPNIGVFGMDVTVVLKRPGERICKRRIAARKIPAGHRVTVDDAIAFLNESY 160
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_PYRAE (50S ribosomal protein L5P OS=Pyrobaculum aerophilum GN=rpl5p PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.070e-23 Identity = 60/159 (37.74%), Postives = 95/159 (59.75%), Query Frame = 2 Query: 62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQ 535 +PM+ I ++K+V+NI VG SG++L +AA +L++L+G P +A+ +++ FGIR+ E I T+R D+A+ L L+ + + +F D G FGI+EHI L G+KYDP+ GI+GMD V L + VTKE+A+++FQ Sbjct: 13 HPMQRIYIEKVVVNIGVGASGEKLEKAAGLLKELTGAEPSRRRAKKSIKDFGIRKGEPIGVAVTLRRDQAVNFLMRALQAVNNRVKKTSFDDRGNVCFGIKEHILLPGVKYDPAVGIWGMDVCVKLAKPGLRVQLRRRRRSKVGKRQLVTKEEAIEFFQ 171
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_THEVO (50S ribosomal protein L5P OS=Thermoplasma volcanium GN=rpl5p PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.397e-23 Identity = 58/127 (45.67%), Postives = 82/127 (64.57%), Query Frame = 2 Query: 62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLE 439 N M+EI + K+V+NI VG++GDRLT+AAKVLE L+G P + A+ +VR F IR+ I T+R D A+ L L VK+Y++ +F G FGI ++ D G+KYDP GI+GMD +VL+ Sbjct: 2 NQMQEIIIDKVVVNIGVGQAGDRLTKAAKVLEMLTGHKPTQTLAKKSVRDFNIRKRLPIGVKVTLRKDDAVNFLNKALYVKDYKIPDYSFDKHGNAYFGISDYTDFKGMKYDPDIGIFGMDVAIVLK 128
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_METLZ (50S ribosomal protein L5P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl5p PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.384e-23 Identity = 64/153 (41.83%), Postives = 86/153 (56.21%), Query Frame = 2 Query: 83 VQKLVLNISVGESGDRLTRAAKVLEQLS-GQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYE--LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKW 529 V K+V+++ VGE+G+RL A ++ L+ G P+ S AR T+ +FGIR+ + I C AT+RG KAM LE LK E L R F TG FGFGI+EH D G YDP GIYGMD V+E + V +E++MK+ Sbjct: 9 VAKVVVHMGVGEAGERLVNAENIMADLTKGAKPIRSYARNTLPAFGIRKGQPIGCKATLRGKKAMDFLEMALKTYAVENVLHTRQFDATGNFGFGIEEHTDFPGQAYDPKIGIYGMDIIAVIEKKGTRTARRKIQQKKINSKLHVAREESMKF 161
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_PICTO (50S ribosomal protein L5P OS=Picrophilus torridus GN=rpl5p PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.113e-23 Identity = 62/168 (36.90%), Postives = 91/168 (54.17%), Query Frame = 2 Query: 62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQH-RVTKEDAMKWFQVKYEGVIL 559 N MREI + K+V+NI VG +G+RL RAAKVLE L+ P F+ A+ TVR F IR+ I T+R D A+ L+ K+Y++ +F G FGI ++ D G+KYDP GI+GMD +V + R++KE+ +K+ Q + I+ Sbjct: 7 NSMREIVIDKVVVNIGVGAAGERLNRAAKVLELLTHHKPAFTSAKRTVRDFNIRKGLNIGVKVTLRKDDALSFLKEAFYAKDYKIPVYSFDKNGNAYFGISDYTDFKGMKYDPDIGIFGMDIAIVFRRRGGYRIEKRRIKKMHIPKKMRISKEETIKYLQENFNVKII 174 The following BLAST results are available for this feature:
BLAST of DR403282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR403282 ID=DR403282; Name=DR403282; organism=Citrus sinensis; type=EST; length=679bpback to top |