DR403282
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_METMJ (50S ribosomal protein L5P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl5p PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.113e-23 Identity = 59/160 (36.88%), Postives = 90/160 (56.25%), Query Frame = 2 Query: 68 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKY 544 M++I + K+V+++ VGESG+RL +A +++Q++GQ PV + A+ T +FGIR+ I C T+R + A + + + L + E L F TG FGI+EH D G+ YDP+ GIYGMD VVLE +V KE+A+ + Y Sbjct: 4 MKDIYIDKVVVHMGVGESGERLVKAEDLVKQITGQKPVRTIAKRTQPAFGIRKGAPIGCKVTLRRENAEKFITTALDIIERRLAPSQFDRTGNVSFGIEEHTDFPGMSYDPTIGIYGMDVNVVLEYKGARIARRSVERRKLPADQKVNKEEAIAFMCENY 163
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_NITMS (50S ribosomal protein L5P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl5p PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.066e-23 Identity = 63/165 (38.18%), Postives = 95/165 (57.58%), Query Frame = 2 Query: 62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGV 553 +PM++I ++K+VLN+ VG+SGD + A++ LEQ+SG+ P A+ T R +G+R+ E I T+RGD A LL+ L+ K + R F + G + FGI+EHID+ G+KY+PS GI G+ V L H +T ++A K + VK GV Sbjct: 7 SPMKKISLEKVVLNMGVGKSGDVIEIASRALEQISGKKPSARNAKETQRDWGVRKGEPIGVAVTIRGDDAKALLKRLLEAKGNTVNGRAFDNFGNYSFGIREHIDIPGVKYEPSIGILGLGISVTLTRPGYGIRTRSKHKASVGKSHIITSQEA-KDYLVKEFGV 170
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_THEAC (50S ribosomal protein L5P OS=Thermoplasma acidophilum GN=rpl5p PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.545e-22 Identity = 54/125 (43.20%), Postives = 79/125 (63.20%), Query Frame = 2 Query: 62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVV 433 NPM E+ + K+V+NI VG++GDRLT+AAKVLE L+G + A+ ++R F IR+ I T+R AM+ L+ VK+Y++ +F G FGI ++ D G+KYDP GI+GMD +V Sbjct: 2 NPMEEVIIDKVVVNIGVGQAGDRLTKAAKVLEMLTGHKATNTLAKKSIRDFNIRKRLPIGVKVTLRKKDAMEFLQKAFYVKDYKITDYSFDKHGNAYFGISDYTDFKGMKYDPDIGIFGMDVAIV 126
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_META3 (50S ribosomal protein L5P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl5p PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.495e-22 Identity = 60/164 (36.59%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 65 PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLE---SGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKY 544 PM + +++K+ +N+ VGESGD+L A KV+ +++GQ PV + A+ T +F IR+ I T+RG KA + L+ + +L +F G F FGI EHID KYDPS GIYGMD V E +H V+KE+A+ + + Y Sbjct: 11 PMSKPRIEKVTVNMGVGESGDKLLTAEKVVSEITGQKPVRTLAKQTNPAFNIRKKLPIGLKITLRGKKAEEFLKDAFTAFTASGKQLFTYSFDKRGNFSFGIPEHIDFPNQKYDPSVGIYGMDICVTFEKPGYSVKRRKAKRANIPAKHLVSKEEAINYIETIY 174
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_CALMQ (50S ribosomal protein L5P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl5p PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.495e-22 Identity = 56/159 (35.22%), Postives = 92/159 (57.86%), Query Frame = 2 Query: 62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQ 535 +PMR I + + +N+ +G+SG+RL +AAKV+ +L+G+TP + A +++ FGIRR E I T+R ++A+ L L ++ L +F + G FGI+EHI + G +YDP+ GI+G D V L HRV++E+ +++FQ Sbjct: 30 HPMRRIFIWSVAVNMGIGQSGERLEKAAKVMSELTGRTPSYRLAHKSIKDFGIRRGEPIGLLVTLRRNEAVWFLLRALAAVDFTLREESF-NAGNVSFGIREHILVPGSRYDPALGIFGFDVAVTLARPGFRVQYRRRARADVGKDHRVSREETIRFFQ 187
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_CENSY (50S ribosomal protein L5P OS=Cenarchaeum symbiosum GN=rpl5p PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.001e-21 Identity = 62/167 (37.13%), Postives = 90/167 (53.89%), Query Frame = 2 Query: 56 LSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGV 553 ++ MR+I ++K+VLN+ VG+SG+ + A + L ++SG+ P A T R FG+R+ E I T+RG+ A L + K ++ R+F D G F FGI EHID+ GIKYDP GI G+D + L HR+T +A K F V+ GV Sbjct: 1 MAGDMRKITLEKVVLNMGVGQSGNAVEVAKRALGEISGKKPCGRDAHETQRDFGVRKGEPIGAAVTIRGEDAGALARRLFEAKGGQVKGRSFDDFGNFSFGIGEHIDIPGIKYDPGIGILGLDVCMTLSRPGYGIRKRSKHKARVGRSHRITATEA-KDFVVREFGV 166
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_NATPD (50S ribosomal protein L5P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl5p PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.491e-21 Identity = 54/161 (33.54%), Postives = 91/161 (56.52%), Query Frame = 2 Query: 68 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYE 547 MRE V+K+V+++ VG G+ L +A ++LE++ Q PV + A+ T++ F +R + I AT+RG+ A + LE+ L + + + R+ F +TG F FG++EH + +YDP GIYG+D V L HR+T EDA+ + + ++ Sbjct: 13 MREPTVEKVVVHMGVGRGGEPLAQAEEILEEIVEQQPVRTTAQKTIQDFEVREGDPIGTKATLRGEDAEEFLETALPLADID--RKQFDETGNFSFGVEEHTEFPSQEYDPQIGIYGLDVTVNLVRPGYRVHKRDKVSRSIPSNHRLTAEDAVTFLESNFD 171
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_HALMA (50S ribosomal protein L5P OS=Haloarcula marismortui GN=rpl5p PE=1 SV=4) HSP 1 Score: 97.0561 bits (240), Expect = 9.374e-20 Identity = 54/161 (33.54%), Postives = 86/161 (53.42%), Query Frame = 2 Query: 68 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYE 547 MRE +++K+V+++ +G G L A +L +++GQ PV +KA+ TV F IR + I T+R + A + L++ L + EL F DTG F FG++EH + +YDPS GIYG+D V L +HR+ DA+ + + Y+ Sbjct: 14 MREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAKVTLRDEMAEEFLQTALPLA--ELATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDVTVNLVRPGYRVAKRDKASRSIPTKHRLNPADAVAFIESTYD 172
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_HALLT (50S ribosomal protein L5P OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl5p PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.224e-19 Identity = 49/171 (28.65%), Postives = 94/171 (54.97%), Query Frame = 2 Query: 38 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYE 547 M+ + S+ MRE ++K+V+++ VG+ G+ L A +++E+++ Q V + ++ T+ FGIR+ + I T+RG+ A L++ L++ ++ + F DTG FG+++H D +YDP+ GIYG+D + +HR+T EDA + + ++ Sbjct: 1 MSESESASHEMREPYLEKVVVHMGVGQGGEPLADAEEIIEEITDQQSVRTTSKRTIAEFGIRKGDPIGVKVTLRGEDAHAFLDTALELA--DISKSQFDDTGNLSFGVEDHTDFPSQEYDPNIGIYGLDVTTTIVRPGYRVSKRDKATASIPSKHRMTAEDATAFLETNFD 169
BLAST of DR403282 vs. ExPASy Swiss-Prot
Match: RL5_HALSA (50S ribosomal protein L5P OS=Halobacterium salinarium GN=rpl5p PE=1 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 1.599e-19 Identity = 55/161 (34.16%), Postives = 84/161 (52.17%), Query Frame = 2 Query: 68 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYATVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYE 547 MRE +++K+V+++ VG+ G L A +LE ++GQ V +KA+ FG+R+ + I T+R D A+ LE L + + RR F +TG FGI+EH D +YDP+ GIYGMD V L HR+ EDA+ + ++ Sbjct: 12 MREPRIEKVVVHMGVGQGGVELQNAETILEAITGQQTVRTKAKSPEPEFGLRQGDPIGAKVTLRDDTAVDFLERALPAADLD--RRQFDNTGNVSFGIEEHTDFPSQEYDPNIGIYGMDVTVNLTRPGYRVAKRDQGTRQIPSNHRLNSEDAVSFLVSNFD 170 The following BLAST results are available for this feature:
BLAST of DR403282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403282 ID=DR403282; Name=DR403282; organism=Citrus sinensis; type=EST; length=679bpback to top |