DR403278

Overview
NameDR403278
Unique NameDR403278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403278 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.529e-36
Identity = 79/170 (46.47%), Postives = 103/170 (60.59%), Query Frame = 2
Query:   53 MAXXXVKVLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGW 562
            M    V +L FS S F MR RIAL +K ++YE  EENL  KS LLL+ NPVHKKIP+LIHN KP+CESL I+EY+DE W    P +LPSDPY R+ ARFWA Y+D K +S  R + S  G + ++A             +        K +FGG+ +GF+D+A   +  W
Sbjct:    1 MESNNVVLLDFSGSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCP-LLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGEL-----GNKTYFGGDNLGFVDVALVPFTSW 164          
BLAST of DR403278 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.405e-36
Identity = 81/204 (39.71%), Postives = 114/204 (55.88%), Query Frame = 2
Query:   92 SPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANG---AEAKKAAXXXXXXXXXXXXDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMPETDKL 694
            S + MRARIAL  K V YE+ EENL ++S LLL+ NP+HKKIPVLIHN KP+CES IIV+Y+DE W+   P ++PSDPY R+ ARFW  Y+D+K +   + +  + G    E KK              D        KPF+G +  GF+D+   ++  W    E     K+  E + P L+ W +R      V + +P+  K+
Sbjct:   13 SMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSP-LMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGKKELISIFKQLEETLTD--------KPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKM--EEECPKLMAWVKRCMERETVSNTLPDAKKV 205          
BLAST of DR403278 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.089e-32
Identity = 80/214 (37.38%), Postives = 116/214 (54.21%), Query Frame = 2
Query:   68 VKVLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKPFFGGNQIGFLDIAFGSYL------GWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMPETDK 691
            VK+LG   SPF  R  +ALK+K + YE++EE L +KS LLL  NP+HKK+PVL+HN K + ES +I+EY+DE W  +   ILP DPY+R+ ARF+A  VDE+    + ++G  + A A +                  K   GK +FGG  +GFLD   GS +      GW  +      ++++ E K P   +W         VKD +P  ++
Sbjct:    7 VKLLGIWASPFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQN--PILPQDPYERSKARFFAKLVDEQ----IMNVGFISMARADEKGREVLAEQVRELIMYLEKELVGKDYFGGKTVGFLDFVAGSLIPFCLERGWEGI-----GLEVITEEKFPEFKRWVRNLEKVEIVKDCVPPREE 209          
BLAST of DR403278 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.929e-27
Identity = 77/217 (35.48%), Postives = 112/217 (51.61%), Query Frame = 2
Query:   74 VLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILP-------SDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKPFF---GGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMPETDKL 694
            +L F  SPF  R RIA+  K +E+E+ EE+LG+KS+LLL+SNPVH+KIPVL+H  +PV ESL+I++Y+D+A+  + P +LP          Y RA ARFWA YVD K +     +    G     A             +        + FF   GG ++GF+D+A   +  W    E+     +  E   P L  WA R     +V   +P  +K+
Sbjct:    9 LLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGT-PHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAEL-----GDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARRCGRIDSVVKHLPSPEKV 217          
BLAST of DR403278 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.929e-27
Identity = 75/216 (34.72%), Postives = 112/216 (51.85%), Query Frame = 2
Query:   74 VLGFSPSPFVMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSD------PYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKPFF---GGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMPETDKL 694
            +L F  SPF  R RIA+  K +E+E+ EE+LG+KS+LLL+SNPVH+KIPVL+H  +PV ESL+I++Y+D+A+  +   + P++       Y RA ARFWA YVD K +     +    G     A             +        + FF   GG ++GF+D+A   +  W    E+     +  E   P L  WA R     +V   +P  +K+
Sbjct:    9 LLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAEL-----GDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSV--EEVAPRLAAWARRCGRIDSVAKHLPSPEKV 217          
The following BLAST results are available for this feature:
BLAST of DR403278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTX1_NICPL1.529e-3646.47Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTX3_SOYBN3.405e-3639.71Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTXA_ARATH5.089e-3237.38Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTU1_ORYSJ4.929e-2735.48Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI4.929e-2734.72Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244H05 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403278 ID=DR403278; Name=DR403278; organism=Citrus sinensis; type=EST; length=702bp
GGGGATTTCATTTCAGTTCCGTGAGCAGAGCTTAGAGAGAAAAAAAAAGA
AAATGGCAANNNNNNACGTGAAGGTTTTGGGTTTTTCGCCAAGCCCATTT
GTGATGAGGGCAAGAATCGCACTTAAGATCAAGTCTGTGGAGTATGAGTT
TCTGGAGGAGAATTTGGGATCCAAAAGCGAGCTTCTGCTTAAATCAAACC
CTGTTCACAAGAAAATCCCAGTTCTGATTCACAATGATAAGCCTGTTTGC
GAATCTCTCATTATTGTCGAGTACGTGGATGAGGCTTGGTCCTCTTCAGG
TCCCTCTATTCTTCCTTCTGATCCTTATGACCGTGCGGTTGCTCGTTTCT
GGGCCGCTTACGTTGATGAGAAGTGGTTCTCTGCCTTGAGAGACATTGGT
AGTGCAAATGGAGCGGAAGCTAAGAAAGCTGCGATTGAGCAATTGATTGA
AGTCTTGGTTTTGCTGGAGGACGCTTTTGTTAAGTGTAGCAAAGGGAAGC
CTTTCTTTGGTGGAAACCAAATTGGGTTTCTTGACATTGCATTTGGTAGC
TACTTGGGATGGCTGAGAGTGACAGAGAAAATTAATGAGGTGAAGCTCCT
TGATGAAGTCAAAACTCCTGGACTGTTGAAATGGGCTGAGAGATTCTGTG
CTGACGCTGCTGTCAAAGATGTTATGCCTGAGACCGATAAGCTTGCCAAA
CT
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