DR403274

Overview
NameDR403274
Unique NameDR403274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:50..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: ADH6_YEAST (NADP-dependent alcohol dehydrogenase 6 OS=Saccharomyces cerevisiae GN=ADH6 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.330e-36
Identity = 76/155 (49.03%), Postives = 94/155 (60.65%), Query Frame = 3
Query:  189 EKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV-SKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 650
            + D+  K+  CG+C SD+H     WGN   P+V GHEIVG V ++G K  S  KVG +VGVG  V SC  CD C  D E YC K + TY+  Y DG ++ GGY++ +   EHFVV IPE  P    APLLC G+TVYSPL   G   PG  VG+V
Sbjct:   33 DHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGCG-PGKKVGIV 186          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: YL498_MIMIV (Probable zinc-type alcohol dehydrogenase-like protein L498 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L498 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31
Identity = 70/202 (34.65%), Postives = 109/202 (53.96%), Query Frame = 3
Query:   69 IHSEMGQAPEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYH--------DGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 650
            + +E  ++P++     A G+   D    +    F R+     +V+ ++ + GICHSD H I  EW    +P++PGHE++G V ++G  V K+ +GD V V  ++ SC  C  C   +E +C        N+           G ITYGGYS+I++  +HFV + P+   ++  APL+CAG T YSPLR   +  PGM VG+V
Sbjct:   58 LKNEYQKSPDK---MTALGFGVTDVGKPVELLVFDRKKPTNNEVSIEIYYTGICHSDWHFIVGEW-KADFPLIPGHELIGRVIDIGPNVDKYSIGDIVCVSPVIDSCGHCKMCTHHIEQHCMNGATEIYNQKTRLPGDIKPSGPITYGGYSNIVIIKQHFVYKFPKNLDIERCAPLMCAGATTYSPLRQAKVG-PGMKVGIV 254          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: ADH7_YEAST (NADP-dependent alcohol dehydrogenase 7 OS=Saccharomyces cerevisiae GN=ADH7 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.145e-30
Identity = 69/163 (42.33%), Postives = 92/163 (56.44%), Query Frame = 3
Query:  168 FSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKV-SKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKV-IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 650
            F  +  G+ DV  ++  CGIC SD H+    WG      + GHEI+G V +VGSK  +  K+GD+VGVG    +C  C+ C  D E YC    ++T    Y DG I+ GG++  +   EHF ++IPE  P    APLLC GITV+SPL   G   PG  VG+V
Sbjct:   26 FDPKPFGDHDVDVEIEACGICGSDFHIAVGNWGPVPENQILGHEIIGRVVKVGSKCHTGVKIGDRVGVGAQALACFECERCKSDNEQYCTNDHVLTMWTPYKDGYISQGGFASHVRLHEHFAIQIPENIPSPLAAPLLCGGITVFSPLLRNGCG-PGKRVGIV 187          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: YJGB_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjgB OS=Escherichia coli (strain K12) GN=yjgB PE=3 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.925e-27
Identity = 65/178 (36.52%), Postives = 99/178 (55.62%), Query Frame = 3
Query:  126 WAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSK--FKVGDKVGVGCMVGSCHSCDSCAIDLENYCPK-VIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 650
            +AAK+  G L  + +       +DV  +V +CGICHSDL MI NEWG + YP+V GHE++G V  +GS       +VG +VG+G    SC  CD+C    +  C +  + T  N+        GG+++ + AD  +V+ +PE   +++  PLLC GITV+ PL  + +      VGV+
Sbjct:    7 YAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNR--------GGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATS-RVGVI 175          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: ADH1_NEUCR (Alcohol dehydrogenase 1 OS=Neurospora crassa GN=adh-1 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.687e-23
Identity = 63/187 (33.69%), Postives = 95/187 (50.80%), Query Frame = 3
Query:   93 PEQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 650
            P+ E P+  +    +   G +       +  G  +V   V + G+CH+DLH +K +W   T  P+V GHE  GVV   G  V++ +VGD  G+  + GSC +C  C    E  CP  +++       G    G +    +A    V +IP+G  L+ TAP+LCAGITVY  L+  G+ +PG  V +V
Sbjct:    2 PQFEIPEQQWAQVVEKKGGPVVFKQIPVQKPGPDEVLINVKYSGVCHTDLHAMKGDWPLATKMPLVGGHEGAGVVVAKGELVTEVEVGDHAGIKWLNGSCLACSFCMQADEPLCPHALLS-------GYTVDGSFQQYAIAKAAHVAKIPKGCDLETTAPVLCAGITVYKGLKESGV-RPGQCVAIV 180          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: ADH1_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adhT PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.687e-23
Identity = 55/152 (36.18%), Postives = 82/152 (53.95%), Query Frame = 3
Query:  195 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV 647
            +V  ++  CG+CH+DLH    +W      P++PGHE VGV+ EVG  V+  KVGD+VG+  +  +C  CD C    E  C +       + + G    GGY++   A   +VV+IP+    +  AP+ CAG+T Y  L+  G  KPG  V +
Sbjct:   27 EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGVIEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCER-------QQNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAI 170          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: ADH2_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adh PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.203e-23
Identity = 55/154 (35.71%), Postives = 81/154 (52.60%), Query Frame = 3
Query:  189 EKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV 647
            E +V  K+  CG+CH+DLH    +W      P++PGHE VG+V EV   V   KVGD+VG+  +  +C  C+ C    E  CP       ++ + G    GGY++   A   +V +IP+       AP+LCAG+T Y  L+  G  +PG  V +
Sbjct:   25 EGEVLVKIEACGVCHTDLHAAHGDWPIKPKLPLIPGHEGVGIVVEVAKGVKSIKVGDRVGIPWLYSACGECEYCLTGQETLCP-------HQLNGGYSVDGGYAEYCKAPADYVAKIPDNLDPVEVAPILCAGVTTYKALKVSGA-RPGEWVAI 170          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: ADH3_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.877e-23
Identity = 55/152 (36.18%), Postives = 82/152 (53.95%), Query Frame = 3
Query:  195 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV 647
            +V  ++  CG+CH+DLH    +W      P++PGHE VG+V EVG  V+  KVGD+VG+  +  +C  CD C    E  C        ++ + G    GGY++   A   +VV+IP+    +  AP+ CAG+T Y  L+  G  KPG  V +
Sbjct:   27 EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC-------EHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAI 170          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: ADH1_ASPFN (Alcohol dehydrogenase 1 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=adh1 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 8.372e-23
Identity = 56/156 (35.90%), Postives = 85/156 (54.49%), Query Frame = 3
Query:  186 GEKDVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 650
            G  ++  KV + G+CH+DLH +K +W   +  P+V GHE  GVV   G  V++F++GD  G+  + GSC +C+ C    E  CP   ++       G    G +    +       ++P+  PLDA AP+LCAGITVY  L+  G+ +PG  V +V
Sbjct:   30 GPDEILVKVRYSGVCHTDLHALKGDWPLPVKMPLVGGHEGAGVVVARGDLVTEFEIGDHAGLKWLNGSCLACEFCKQADEPLCPNASLS-------GYTVDGTFQQYAIGKATHASKLPKNVPLDAVAPVLCAGITVYKGLKESGV-RPGQTVAIV 177          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: ADH3_EMENI (Alcohol dehydrogenase 3 OS=Emericella nidulans GN=alcC PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.087e-22
Identity = 57/158 (36.08%), Postives = 83/158 (52.53%), Query Frame = 3
Query:  186 GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSK--FKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 650
            G  ++  K+ + G+CH+DLH +K +W   +  P++ GHE  GVV   G  V    FK+GD+ G+  + GSC SC+ C    E  CP   ++       G    G +    +       +IP+  PLDA AP+LCAGITVY  L+  G  +PG  V +V
Sbjct:   30 GPDEILVKMRYSGVCHTDLHAMKGDWPLPSKMPLIGGHEGAGVVVAKGELVKDEDFKIGDRAGIKWLNGSCLSCEMCMQADEPLCPHASLS-------GYTVDGTFQQYTIGKAALASKIPDNVPLDAAAPILCAGITVYKGLKESGA-RPGQTVAIV 179          
The following BLAST results are available for this feature:
BLAST of DR403274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
ADH6_YEAST1.330e-3649.03NADP-dependent alcohol dehydrogenase 6 OS=Saccharo... [more]
YL498_MIMIV2.871e-3134.65Probable zinc-type alcohol dehydrogenase-like prot... [more]
ADH7_YEAST4.145e-3042.33NADP-dependent alcohol dehydrogenase 7 OS=Saccharo... [more]
YJGB_ECOLI1.925e-2736.52Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADH1_NEUCR1.687e-2333.69Alcohol dehydrogenase 1 OS=Neurospora crassa GN=ad... [more]
ADH1_BACST1.687e-2336.18Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH2_BACST2.203e-2335.71Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH3_BACST2.877e-2336.18Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH1_ASPFN8.372e-2335.90Alcohol dehydrogenase 1 OS=Aspergillus flavus (str... [more]
ADH3_EMENI7.087e-2236.08Alcohol dehydrogenase 3 OS=Emericella nidulans GN=... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244G17 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244G17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403274 ID=DR403274; Name=DR403274; organism=Citrus sinensis; type=EST; length=652bp
GGGGATCGCAACTTGTTTGTTTAATGCCCTGGACGTCAACGTAAGCCAAC
AAACACCGATATNATTAAATTCATTCTGAAATGGGGCAAGCACCGGAGCA
AGAGCACCCTAAGAACGCCTTTGGATGGGCTGCCAAGGACACTTCTGGCG
TTCTCTCCCCCTTTCACTTCTCCAGAAGAGCAACGGGAGAGAAGGATGTG
ACATTCAAAGTAACTCACTGTGGGATATGCCATTCAGATCTTCACATGAT
AAAAAATGAATGGGGCAATACCATTTACCCAATCGTCCCCGGACATGAGA
TTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGAGTAAATTCAAAGTC
GGAGACAAAGTGGGAGTAGGATGCATGGTGGGATCATGCCACTCTTGTGA
TAGCTGCGCCATTGATCTTGAGAACTACTGCCCCAAAGTTATAATGACCT
ATGCCAACAAGTACCATGATGGAACCATCACATACGGAGGCTACTCTGAC
ATTATGGTTGCCGATGAGCACTTTGTGGTCCGTATTCCTGAAGGCACACC
ACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGTATCACAGTCTACAGTC
CGTTGAGATTCTATGGACTCGACAAGCCTGGTATGCATGTGGGTGTTGTC
GG
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