DR403274

Overview
NameDR403274
Unique NameDR403274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:50..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: ADH1_PICST (Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.746e-20
Identity = 53/139 (38.13%), Postives = 78/139 (56.12%), Query Frame = 3
Query:  195 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLR 608
            ++   V + G+CH+DLH  K +W  +T  P+V GHE  GVV  +GS V+ +++GD  G+  + GSC +C+ C    E  C K  +  +   HDG+     +     AD     R+P+GT L   AP+LCAGITVY  L+
Sbjct:   33 EILINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVGIGSNVTGWELGDYAGIKWLNGSCLNCEFCQHSDEPNCAKADL--SGYTHDGS-----FQQYATADAVQAARLPKGTDLAQAAPILCAGITVYKALK 164          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: ADH1_KLUMA (Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus GN=ADH1 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.746e-20
Identity = 50/139 (35.97%), Postives = 77/139 (55.40%), Query Frame = 3
Query:  195 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLR 608
            ++   V + G+CH+DLH  + +W  +T  P+V GHE  G+V  +G  V+ +++GD  G+  + GSC SC+ C +  E  CPK  +  +   HDG+     +     AD     RIP+   L   AP+LCAG+TVY  L+
Sbjct:   33 ELLINVKYSGVCHTDLHAWQGDWPLDTKLPLVGGHEGAGIVVAMGENVTGWEIGDYAGIKWLNGSCMSCEECELSNEPNCPKADL--SGYTHDGS-----FQQYATADAVQAARIPKNVDLAEVAPILCAGVTVYKALK 164          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: ADH2_YEAST (Alcohol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=ADH2 PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 2.280e-20
Identity = 52/139 (37.41%), Postives = 76/139 (54.68%), Query Frame = 3
Query:  195 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLR 608
            ++   V + G+CH+DLH    +W   T  P+V GHE  GVV  +G  V  +K+GD  G+  + GSC +C+ C +  E+ CP   +  +   HDG+     + +   AD      IP+GT L   AP+LCAGITVY  L+
Sbjct:   33 ELLINVKYSGVCHTDLHAWHGDWPLPTKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL--SGYTHDGS-----FQEYATADAVQAAHIPQGTDLAEVAPILCAGITVYKALK 164          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: ADH3_YEAST (Alcohol dehydrogenase 3, mitochondrial OS=Saccharomyces cerevisiae GN=ADH3 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.079e-20
Identity = 51/139 (36.69%), Postives = 76/139 (54.68%), Query Frame = 3
Query:  195 DVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLR 608
            ++   V + G+CH+DLH    +W   +  P+V GHE  GVV ++GS V  +KVGD  G+  + GSC +C+ C    E+ CP   +  +   HDG+     +     AD     +I +GT L   AP+LCAG+TVY  L+
Sbjct:   60 EILINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVKLGSNVKGWKVGDLAGIKWLNGSCMTCEFCESGHESNCPDADL--SGYTHDGS-----FQQFATADAIQAAKIQQGTDLAEVAPILCAGVTVYKALK 191          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: ADH1_YEAST (Alcohol dehydrogenase 1 OS=Saccharomyces cerevisiae GN=ADH1 PE=1 SV=4)

HSP 1 Score: 97.8265 bits (242), Expect = 5.079e-20
Identity = 51/139 (36.69%), Postives = 75/139 (53.96%), Query Frame = 3
Query:  195 DVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLR 608
            ++   V + G+CH+DLH    +W   +  P+V GHE  GVV  +G  V  +K+GD  G+  + GSC +C+ C +  E+ CP   +  +   HDG+     +     AD      IP+GT L   AP+LCAGITVY  L+
Sbjct:   33 ELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL--SGYTHDGS-----FQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALK 164          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: ADH2_CANAL (Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH2 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.663e-20
Identity = 54/139 (38.85%), Postives = 74/139 (53.24%), Query Frame = 3
Query:  195 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLR 608
            ++   V + G+CH+DLH  K +W   T  P+V GHE  GVV  +G  V  +KVGD  GV  + GSC +C+ C    E  C +  +  +   HDG+     +     AD     RIP GT L   AP+LCAG+TVY  L+
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLATKLPLVGGHEGAGVVVALGENVKGWKVGDYAGVKWLNGSCLNCEYCQSGAEPNCAEADL--SGYTHDGS-----FQQYATADAVQAARIPAGTDLANVAPILCAGVTVYKALK 164          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: ADH1_CANAL (Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.299e-19
Identity = 52/139 (37.41%), Postives = 74/139 (53.24%), Query Frame = 3
Query:  195 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLR 608
            ++   V + G+CH+DLH  K +W   T  P+V GHE  GVV  +G  V  +K+GD  G+  + GSC SC+ C    E  C +  +  +   HDG+     +     AD     +IP GT L   AP+LCAG+TVY  L+
Sbjct:   35 ELLIHVKYSGVCHTDLHARKGDWPLATKLPLVGGHEGAGVVVGMGENVKGWKIGDFAGIKWLNGSCMSCEFCQQGAEPNCGEADL--SGYTHDGS-----FEQYATADAVQAAKIPAGTDLANVAPILCAGVTVYKALK 166          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: ADH2_EMENI (Alcohol dehydrogenase 2 OS=Emericella nidulans GN=alcB PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 5.615e-19
Identity = 51/147 (34.69%), Postives = 76/147 (51.70%), Query Frame = 3
Query:  186 GEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPG----HEIVGVVTEVGS--KVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLR 608
            G+ +V   +TH G+CHSD  ++ N W    +P  PG    HE VG V ++G+  + S  K+GD+VGV  +  +C  C  C    +  C        N+   G  T G +   ++    +V  IP+G P    APLLCAG+TVY+ L+
Sbjct:   34 GDNEVLINLTHSGVCHSDFGIMTNTWKILPFPTQPGQVGGHEGVGKVVKLGAGAEASGLKIGDRVGVKWISSACGQCPPCQDGADGLC-------FNQKVSGYYTPGTFQQYVLGPAQYVTPIPDGLPSAEAAPLLCAGVTVYASLK 173          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: ADH_STAEQ (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=adh PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.334e-19
Identity = 46/147 (31.29%), Postives = 79/147 (53.74%), Query Frame = 3
Query:  207 KVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV 647
            K  +CG+CH+DLH+   ++G+ +  +  GHE +G V EV   V   KVGD+V +  M  +C +C+ C    E  C  V+       + G    G  ++ ++ D ++ V++PE     A + + CAG+T Y  ++  G++ PG  +GV
Sbjct:   30 KTEYCGVCHTDLHVKNADFGD-VTGVTLGHEGIGRVIEVADNVDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDVL-------NAGYTVDGAMAEEVIVDANYAVKVPENLDPAAASSITCAGVTTYKAVKVSGIE-PGQWLGV 167          
BLAST of DR403274 vs. ExPASy Swiss-Prot
Match: ADHA_RHIME (Alcohol dehydrogenase OS=Rhizobium meliloti GN=adhA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.251e-18
Identity = 50/142 (35.21%), Postives = 73/142 (51.41%), Query Frame = 3
Query:  186 GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLR 608
            G   V  K    G+CH+DLH  K +W      P +PGHE VG V ++G++V++ K GD+VGV  +  +C  C  C    E  C        ++ + G    G ++   +AD  FV R+P        AP+LCAG+TVY  L+
Sbjct:   26 GPGQVLIKYEATGVCHTDLHAAKGDWPVRPNPPFIPGHEGVGYVAKLGAEVTRLKEGDRVGVPWLHTACGCCTPCRTGWETLC-------GSQQNTGYSVDGTFAQYGLADPDFVGRLPARLEFGPAAPVLCAGVTVYKGLK 160          
The following BLAST results are available for this feature:
BLAST of DR403274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
ADH1_PICST1.746e-2038.13Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1... [more]
ADH1_KLUMA1.746e-2035.97Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus... [more]
ADH2_YEAST2.280e-2037.41Alcohol dehydrogenase 2 OS=Saccharomyces cerevisia... [more]
ADH3_YEAST5.079e-2036.69Alcohol dehydrogenase 3, mitochondrial OS=Saccharo... [more]
ADH1_YEAST5.079e-2036.69Alcohol dehydrogenase 1 OS=Saccharomyces cerevisia... [more]
ADH2_CANAL8.663e-2038.85Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH... [more]
ADH1_CANAL4.299e-1937.41Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH... [more]
ADH2_EMENI5.615e-1934.69Alcohol dehydrogenase 2 OS=Emericella nidulans GN=... [more]
ADH_STAEQ7.334e-1931.29Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]
ADHA_RHIME1.251e-1835.21Alcohol dehydrogenase OS=Rhizobium meliloti GN=adh... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244G17 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244G17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403274 ID=DR403274; Name=DR403274; organism=Citrus sinensis; type=EST; length=652bp
GGGGATCGCAACTTGTTTGTTTAATGCCCTGGACGTCAACGTAAGCCAAC
AAACACCGATATNATTAAATTCATTCTGAAATGGGGCAAGCACCGGAGCA
AGAGCACCCTAAGAACGCCTTTGGATGGGCTGCCAAGGACACTTCTGGCG
TTCTCTCCCCCTTTCACTTCTCCAGAAGAGCAACGGGAGAGAAGGATGTG
ACATTCAAAGTAACTCACTGTGGGATATGCCATTCAGATCTTCACATGAT
AAAAAATGAATGGGGCAATACCATTTACCCAATCGTCCCCGGACATGAGA
TTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGAGTAAATTCAAAGTC
GGAGACAAAGTGGGAGTAGGATGCATGGTGGGATCATGCCACTCTTGTGA
TAGCTGCGCCATTGATCTTGAGAACTACTGCCCCAAAGTTATAATGACCT
ATGCCAACAAGTACCATGATGGAACCATCACATACGGAGGCTACTCTGAC
ATTATGGTTGCCGATGAGCACTTTGTGGTCCGTATTCCTGAAGGCACACC
ACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGTATCACAGTCTACAGTC
CGTTGAGATTCTATGGACTCGACAAGCCTGGTATGCATGTGGGTGTTGTC
GG
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