DR403269

Overview
NameDR403269
Unique NameDR403269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1283 contig Csv1_Contig1283:120..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.832e-38
Identity = 87/154 (56.49%), Postives = 100/154 (64.94%), Query Frame = 3
Query:   81 MSLIPSIFGN--RSVFDPFSSDVW-------APLGSSSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            MSLIPSIFG    +VFDPFS D+W        P  S S E S F + +VD KET+EAHV KAD+PGL          D RVLQISGER+VEKEDKND WHRV+R  GKF+RRFRLPENAK++QVKA MENGVL                I+I+G
Sbjct:    1 MSLIPSIFGGPRSNVFDPFSLDMWDPFKDFHVPTSSVSAENSAFVNTRVDWKETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENAKVEQVKACMENGVLTVTIPKEEVKKSDVKPIEISG 154          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.076e-37
Identity = 86/157 (54.78%), Postives = 102/157 (64.97%), Query Frame = 3
Query:   81 MSLIPSIFGNR--SVFDPFSSDVWAPL----------GSSSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            MSLIPSIFG R  +VFDPFS DV+ P            + + +V+ F +A+VD +ET EAHVFKADLPGL          DG +LQISGERS E E+KNDKWHRVER  GKF RRFRLPENAK++++KASMENGVL               SI I+G
Sbjct:    1 MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.836e-37
Identity = 82/156 (52.56%), Postives = 101/156 (64.74%), Query Frame = 3
Query:   81 MSLIPSIFGNR--SVFDPFSSDVWAPL---------GSSSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            MSL+PS FG R  +VFDPFS DVW P           + + +V+ F +A+VD +ET EAHVFKAD+PGL          DG +LQISGERS E E+K+D WHRVER  GKF+RRFRLPENAK+++VKASMENGVL               S+ I+G
Sbjct:    1 MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.341e-37
Identity = 85/153 (55.56%), Postives = 97/153 (63.40%), Query Frame = 3
Query:   81 MSLIPSIFGNR---SVFDPFSSDVWAPL-----GSSSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            MS+IPS F N    ++FDPFS DVW P       S S E S   +A+VD +ET EAHVFKADLPGL          +  VL+ISGER VEKEDKND WHRVER  G+F RRFRLPEN K+DQVKA+MENGVL               SIQI+G
Sbjct:    1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.111e-37
Identity = 84/157 (53.50%), Postives = 102/157 (64.97%), Query Frame = 3
Query:   81 MSLIPSIFGNR--SVFDPFSSDVWAP-----LGSSS-----NEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            MS+IPS FG R  +VFDPFS DVW P     L +SS      E + F +  +D KET +AHVFKADLPGL          +G+VLQISGER+ EKE+KNDKWHRVER  GKF+RRFRLPENAK+D+VKA+M NGV+               +I I+G
Sbjct:    1 MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.651e-36
Identity = 81/134 (60.45%), Postives = 91/134 (67.91%), Query Frame = 3
Query:   81 MSLIPSIFGNR----SVFDPFSSDVWAPL------GSSSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 452
            MSLIPS FGN     S+FDPFS DVW P        S S E S   +A+VD KET EAHVFKADLPG+          D  VL+ISGER VEKE+K D WHRVER  G+F R+F+LPEN K+DQVKASMENGVL
Sbjct:    1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVL 134          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.007e-35
Identity = 78/149 (52.35%), Postives = 96/149 (64.43%), Query Frame = 3
Query:   96 SIFGNRSVFDPFSSDVWAPLGS---------SSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            S+    +VFDPFS D+W P  S         S N+ + FA+A++D KET E+HVFKADLPG+          +G VL ISG+RS EKEDKNDKWHRVER  G+F+RRFRLPENAK+DQVKA MENGVL               +I+I+G
Sbjct:    2 SLVRRSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVTVPKAEVKKPEVKAIEISG 150          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.316e-35
Identity = 81/132 (61.36%), Postives = 91/132 (68.94%), Query Frame = 3
Query:   81 MSLIPSIFGNR-----SVFDPFSSDVWAP---LGSSSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 452
            MSLIPS FGN      ++FDPFS DVW P   L   S+  S  A+A+VD KET EAHVFKADLPG+          D  VL+ISGER VEKE+K D WHRVER  G F R+FRLPEN K+DQVKASMENGVL
Sbjct:    1 MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKELQFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVL 132          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.718e-35
Identity = 82/159 (51.57%), Postives = 101/159 (63.52%), Query Frame = 3
Query:   81 MSLIPSIFGNR--SVFDPFSSDVWAPL---------GSSSN---EVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            MS+IPS FG+R  +V +PFS D+W P          G+SS    E + FA+  +D KET +AHVFKADLPGL          +G+VLQISGER+ EKE+KN+KWHRVE   GKF+RRFRLPENA +D+VKA MENGVL               SI I+G
Sbjct:    1 MSIIPSFFGSRRSNVLNPFSLDIWDPFQDYPLITSSGTSSEFGKETAAFANTHIDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGVLTVTVPKVEMKKPEVKSIHISG 159          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.244e-35
Identity = 77/149 (51.68%), Postives = 96/149 (64.43%), Query Frame = 3
Query:   96 SIFGNRSVFDPFSSDVWAPLGS---------SSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            S+    +VFDPFS D+W P  S         S N+ + FA+A++D KET E+HVFKADLPG+          +G VL ISG+RS EKEDKNDKWHRVER  G+F+RRFRLPENAK+DQVKA +ENGVL               +I+I+G
Sbjct:    2 SLVRRSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 150          
The following BLAST results are available for this feature:
BLAST of DR403269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
HSP15_SOYBN2.832e-3856.4917.6 kDa class I heat shock protein OS=Glycine max... [more]
HS17C_ARATH1.076e-3754.7817.6 kDa class I heat shock protein 3 OS=Arabidops... [more]
HSP17_ARATH1.836e-3752.5617.4 kDa class I heat shock protein OS=Arabidopsis... [more]
HS17B_ARATH5.341e-3755.5617.6 kDa class I heat shock protein 2 OS=Arabidops... [more]
HSP11_DAUCA9.111e-3753.5017.8 kDa class I heat shock protein OS=Daucus caro... [more]
HS178_ARATH2.651e-3660.4517.8 kDa class I heat shock protein OS=Arabidopsis... [more]
HS16B_ORYSJ1.007e-3552.3516.9 kDa class I heat shock protein 2 OS=Oryza sat... [more]
HS17A_ARATH1.316e-3561.3617.6 kDa class I heat shock protein 1 OS=Arabidops... [more]
HSP12_DAUCA1.718e-3551.5718.0 kDa class I heat shock protein OS=Daucus caro... [more]
HS16A_ORYSJ2.244e-3551.6816.9 kDa class I heat shock protein 1 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244G09 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403269 ID=DR403269; Name=DR403269; organism=Citrus sinensis; type=EST; length=708bp
GGGGAGTAAAGAGTGAAGACCCAATTGATAAATAAGCAAACGCTTTCGAA
GAAAGTGCTCGTCGCTTTGATTAAGCAAAAATGTCTTTGATTCCATCTAT
ATTCGGAAACAGGAGCGTGTTCGACCCATTTTCCTCGGACGTCTGGGCGC
CCCTTGGCTCCTCCAGCAACGAGGTGTCAACATTCGCCAGTGCTCAAGTC
GATCGGAAAGAAACCCGGGAAGCTCATGTTTTCAAGGCGGATCTTCCGGG
GCTCAAGAAAGAGGAAGTGAAGGTTGAAGTTGAGGACGGGAGAGTCCTTC
AGATCAGCGGTGAGAGGAGCGTCGAGAAGGAAGACAAGAACGACAAATGG
CACCGTGTTGAGAGGGGCCGCGGCAAGTTCGTGAGGAGGTTCCGGTTGCC
TGAGAATGCCAAGATCGATCAAGTTAAGGCATCAATGGAGAATGGTGTCC
TCACCGTCACTGTTCCCAAAGTGGAGGAGAAGAAGCCTGAGGTCAAATCC
ATTCAGATCACTGGTTGAAACTCTCCGTTAATTGCAGCCTTTTTAATTTG
GTTCTTGTTTTGTTCTGTGTGTTAATGAACGATGTGCGATTGCTGTTAAG
TGTGTCGCATACTTTTGTTCATGTAATGTGTTGTCGACTGCTTTTTTAAG
TAATAAAAATATGTTGTTTTCTTGATCCAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA
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