DR403269

Overview
NameDR403269
Unique NameDR403269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1283 contig Csv1_Contig1283:120..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.114e-34
Identity = 79/122 (64.75%), Postives = 87/122 (71.31%), Query Frame = 3
Query:  123 DPFSSDVWAP----------LGSSS--NEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 452
            DPFS DVW P          L +SS   E S F S ++D KET EAHVFKADLPGL          D RVLQISGER+VEKEDKND+WHRVER  GKF+RRFRLPENAK+DQVKA+MENGVL
Sbjct:    1 DPFSLDVWDPFKDFPFTNSALSASSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVL 122          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.900e-34
Identity = 79/160 (49.38%), Postives = 94/160 (58.75%), Query Frame = 3
Query:   96 SIFGNRSVFDPFSSDVWAPLGS--------------------SSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            S+    +VFDPFS D+W P                       +S+E + FA A++D KET EAHVFKAD+PGL          DG VLQISGERS E+E+K DKWHRVER  GKF+RRFRLPEN K +Q+KASMENGVL               SIQ+TG
Sbjct:    2 SLIRRSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQVTG 161          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.240e-34
Identity = 74/131 (56.49%), Postives = 91/131 (69.47%), Query Frame = 3
Query:   81 MSLIPSIFGNR--SVFDPFSSDVWAPLGS-----SSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 452
            MS+IPS F ++  ++FDPFS D W P         + E +   +A++D KET EAHV KADLPG+          DGRVLQISGER  E+E+K+D WHRVER  GKF+RRFRLPENAK+D+VKA MENGVL
Sbjct:    1 MSIIPSFFTSKRSNIFDPFSLDTWDPFQGIISTEPARETAAIVNARIDWKETPEAHVLKADLPGMKKEEVKVEVEDGRVLQISGERCREQEEKDDTWHRVERSSGKFIRRFRLPENAKMDEVKAMMENGVL 131          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 4.232e-34
Identity = 80/153 (52.29%), Postives = 94/153 (61.44%), Query Frame = 3
Query:   96 SIFGNRSVFDPFSSDVWAPL-------GSSS------NEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            S+    +VFDPFS D+W P        GS S      ++ + FA A++D KET EAHVFKAD+PGL          DG VLQISGER  E+E+K DKWHRVER  GKF+RRFRLPEN K +Q+KASMENGVL               SIQITG
Sbjct:    2 SMIRRSNVFDPFSLDLWDPFDGFPFGSGSGSLFPRANSDAAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQITG 154          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.231e-33
Identity = 79/160 (49.38%), Postives = 97/160 (60.62%), Query Frame = 3
Query:   96 SIFGNRSVFDPFSSDVWAPL--------GSSS------------NEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            S+    +VFDPFS D+W P         GSSS            +E + FA A++D KET EAHVFKAD+PGL          DG +LQISGER+ E+E+K D+WHRVER  GKF+RRFRLP+NAK +Q+KASMENGVL               SIQI+G
Sbjct:    2 SLIRRSNVFDPFSLDLWDPFDGFPFGSGGSSSGSIFPSFPRGASSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASMENGVLTVTVPKEEAKKPDVKSIQISG 161          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.231e-33
Identity = 77/149 (51.68%), Postives = 95/149 (63.76%), Query Frame = 3
Query:   96 SIFGNRSVFDPFSSDVWAPL---------GSSSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            S+    +VFDPF+ D W P           +S  + + FA+A+VD KET E+HVFKADLPG+          +G VL ISG+RS EKEDKNDKWHRVER  G+F+RRFRLPENAK+DQVKASMENGVL               +I+I+G
Sbjct:    2 SLVRRSNVFDPFA-DFWDPFDGVFRSLVPATSDRDTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPKAEVKKPEVKAIEISG 149          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.743e-33
Identity = 78/158 (49.37%), Postives = 96/158 (60.76%), Query Frame = 3
Query:   96 SIFGNRSVFDPFSSDVWAPL--------GSSSN----------EVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            S+    + FDPFS D+W P+        GSSS+          + + FA A++D KET E HVFKAD+PGL          DG +LQISGERS E+E+K+DKWHRVER  GKF+RRFRLPEN K +Q+KASMENGVL               SIQI+G
Sbjct:    2 SLIRRGNAFDPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQISG 159          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.743e-33
Identity = 77/151 (50.99%), Postives = 95/151 (62.91%), Query Frame = 3
Query:   96 SIFGNRSVFDPFSSDVWAP-----------LGSSSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            SI    +VFDPF+ D+WA            +   S+E + FA+A+VD KET EAHVFK DLPG+          DG VL +SGERS EKEDKNDKWHRVER  GKFVRRFRLPE+AK+++VKA +ENGVL               +I+I+G
Sbjct:    2 SIVRRSNVFDPFA-DLWADPFDTFRSIVPAISGGSSETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 151          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.982e-33
Identity = 77/141 (54.61%), Postives = 96/141 (68.09%), Query Frame = 3
Query:   81 MSLIPSIF---GNRS-VFDPFSSD-VWAPL------------GSSSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVL 452
            MSLIP+ +   G RS +FDPFS D +W P               ++ E + FA+A++D KET EAHVFKADLPG+          DG VL+ISG+R+ EKE+KND WHRVER  G+F+R+FRLPENAK+DQVKA MENGVL
Sbjct:    1 MSLIPNNWFNTGRRSNIFDPFSLDEIWDPFFGLPSTLSTVPRSETAAETAAFANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENGVL 141          
BLAST of DR403269 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.757e-32
Identity = 75/151 (49.67%), Postives = 94/151 (62.25%), Query Frame = 3
Query:   96 SIFGNRSVFDPFSSDVWAP-----------LGSSSNEVSTFASAQVDRKETREAHVFKADLPGLXXXXXXXXXXDGRVLQISGERSVEKEDKNDKWHRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXXSIQITG 515
            SI    +VFDPF+ D+WA            +    +E + FA+A++D KET EAHVFKADLPG+          DG VL +SGER+ EKEDKNDKWHRVER  GKFVRRFRL E+AK+++VKA +ENGVL               +IQI+G
Sbjct:    2 SIVRRTNVFDPFA-DLWADPFDTFRSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIQISG 151          
The following BLAST results are available for this feature:
BLAST of DR403269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
HSP11_MEDSA1.114e-3464.7518.1 kDa class I heat shock protein (Fragment) OS=... [more]
HS181_ORYSJ1.900e-3449.3818.1 kDa class I heat shock protein OS=Oryza sativ... [more]
HSP11_HELAN3.240e-3456.4917.6 kDa class I heat shock protein OS=Helianthus ... [more]
HS174_ORYSJ4.232e-3452.2917.4 kDa class I heat shock protein OS=Oryza sativ... [more]
HS17A_ORYSJ1.231e-3349.3817.9 kDa class I heat shock protein OS=Oryza sativ... [more]
HS16C_ORYSJ1.231e-3351.6816.9 kDa class I heat shock protein 3 OS=Oryza sat... [more]
HS177_ORYSJ2.743e-3349.3717.7 kDa class I heat shock protein OS=Oryza sativ... [more]
HS16A_WHEAT2.743e-3350.9916.9 kDa class I heat shock protein 1 OS=Triticum ... [more]
HSP11_CHERU7.982e-3354.6118.3 kDa class I heat shock protein OS=Chenopodium... [more]
HS16B_WHEAT6.757e-3249.6716.9 kDa class I heat shock protein 2 OS=Triticum ... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244G09 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403269 ID=DR403269; Name=DR403269; organism=Citrus sinensis; type=EST; length=708bp
GGGGAGTAAAGAGTGAAGACCCAATTGATAAATAAGCAAACGCTTTCGAA
GAAAGTGCTCGTCGCTTTGATTAAGCAAAAATGTCTTTGATTCCATCTAT
ATTCGGAAACAGGAGCGTGTTCGACCCATTTTCCTCGGACGTCTGGGCGC
CCCTTGGCTCCTCCAGCAACGAGGTGTCAACATTCGCCAGTGCTCAAGTC
GATCGGAAAGAAACCCGGGAAGCTCATGTTTTCAAGGCGGATCTTCCGGG
GCTCAAGAAAGAGGAAGTGAAGGTTGAAGTTGAGGACGGGAGAGTCCTTC
AGATCAGCGGTGAGAGGAGCGTCGAGAAGGAAGACAAGAACGACAAATGG
CACCGTGTTGAGAGGGGCCGCGGCAAGTTCGTGAGGAGGTTCCGGTTGCC
TGAGAATGCCAAGATCGATCAAGTTAAGGCATCAATGGAGAATGGTGTCC
TCACCGTCACTGTTCCCAAAGTGGAGGAGAAGAAGCCTGAGGTCAAATCC
ATTCAGATCACTGGTTGAAACTCTCCGTTAATTGCAGCCTTTTTAATTTG
GTTCTTGTTTTGTTCTGTGTGTTAATGAACGATGTGCGATTGCTGTTAAG
TGTGTCGCATACTTTTGTTCATGTAATGTGTTGTCGACTGCTTTTTTAAG
TAATAAAAATATGTTGTTTTCTTGATCCAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA
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