DR403254

Overview
NameDR403254
Unique NameDR403254
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:292..1032. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.105e-27
Identity = 66/221 (29.86%), Postives = 121/221 (54.75%), Query Frame = 1
Query:   70 ILWLVFTLVWVMALSFV---SRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSNTIFSIDLVNP--NEREFRDTVSGILEEAGKPNLSDHFP 717
            +LW V  ++ +  L      S+ R  + PP P   P+IGNL +LG  PH+SL KL+K +GP+M L+LG+V TV+VS+P  AK +L+++DL  C R   E    L + +    +A+      WK LRK+    +F ++++++ Q ++  +++ L+  + ++      +++     + ++N++   +F ++      N  +F+D V   LE  G  + SD FP
Sbjct:    3 VLWFVSLILLISILLVAVKHSKRRWVRQPPSPPGLPIIGNLHQLGELPHQSLCKLSKKYGPVMLLKLGRVPTVIVSTPETAKQVLKDYDLHCCSRPSLEGTRKLSYNY--LDIAFSRFDDYWKELRKLCVEELFCNKRINSIQPIKEAEMEKLIDSIAESASQKTLVNLSDTFLSLNVNVICKAVFGVNFQGTVLNNDKFQDLVHEALEMLGSFSASDFFP 221          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.700e-26
Identity = 68/223 (30.49%), Postives = 121/223 (54.26%), Query Frame = 1
Query:   88 TLVWVMALSFV-----------SRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSNTIFSIDLVNP--NEREFRDTVSGILEEAGKPNLSDHFP 717
            T +W+++L FV           +R  +++ PP P   P+IGNL +LG  PH+SL KL+K +GP+M L+LG+V TV+VSS   AK  L+ HDL  C R  P    +    ++   +A+ P    WK +RK++   +F+S+++ + Q ++ +++K L+  + ++      I++ +     +++++  T FS++      N   F + V   LE  G  + SD  P
Sbjct:    2 TNIWLLSLIFVICILVAVFNHKNRRNYQRTPPSPPGCPIIGNLHQLGELPHQSLWKLSKKYGPVMLLKLGRVPTVIVSSSETAKQALKIHDLHCCSR--PGFAGARELSYNYLDIAFSPYDDYWKEVRKLAVQELFSSKQVHSIQPIKDEEVKKLIDSISESAAQKTPINLNKTLLALTVSVVCRTAFSVNFEGTVLNSERFNNIVREALEMLGSFSASDFIP 222          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.700e-26
Identity = 64/223 (28.70%), Postives = 124/223 (55.61%), Query Frame = 1
Query:   73 LWLVFTLVWVMALSFVSRGRHK---QLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLP--FPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSNTIFSIDLVNPN-EREFRDTVSGILEEAGKPNLSDHFPLL 723
            LW +  +    A  F+++   K    LPPGP   P+IGNL +LG+KPH+S+ KL++ +GP++ L+LG+V +VV S+P   K +L+  D   C R    A L+ P    ++   LA+ P S  WK +RK++ + ++T++++ + + +R +++   +  ++ +    + +++ Q     S +++    F I+L     E  + + + G +E  G    SD+FP++
Sbjct:    3 LWYIIVVFVFFASIFIAKNTRKTKKNLPPGPPRLPIIGNLHQLGSKPHRSMFKLSEKYGPLVYLKLGKVPSVVASTPETVKDVLKTFDKDCCSR----AFLTYPARISYNLKDLAFAPYSKYWKAVRKMTVVELYTAKRVKSFRNIREEEVASFVEFIKHSASLEEIVNLNQTLVKLSGSVICRVGFGINLEGSKLENTYEEVIHGTMEVLGSFAASDYFPVI 221          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.526e-26
Identity = 61/221 (27.60%), Postives = 118/221 (53.39%), Query Frame = 1
Query:   94 VWVMALSFV----------SRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSNTIFSIDLVNPN-EREFRDTVSGILEEAGKPNLSDHFPLL 723
            +W + ++FV          +R   K LPPGP   P+IGNL +LG+KPH S+ KL++ +GP+M+LR G V+TVV S+P   K +L+  D   C R  P         ++   + + P +  W+ +RK++ + ++T++++ + Q  R++++  L+  +       K +++       S +++   +F I+L     E  + + + G +E  G    +D+FP++
Sbjct:    3 LWYIIVAFVFFSTIIIVRNTRKTKKNLPPGPPRLPIIGNLHQLGSKPHSSMFKLSEKYGPLMALRFGSVSTVVASTPETVKEVLKTFDAECCSR--PYMTYPARLTYNLKDIGFCPYTKYWREVRKMTVVELYTAKRVQSFQHTRKEEVASLVDFITQAASLEKPVNLNTKLMKLSGSVICRVVFGINLKGSKLENLYEEVIQGTMEVVGSFAAADYFPII 221          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.855e-26
Identity = 73/235 (31.06%), Postives = 126/235 (53.62%), Query Frame = 1
Query:   55 LLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAG-KAIDVGQAAFNTSLN-----LLSNTIFSIDLVNPNEREFRDTVSGILEEAGKPNLSDHFPLLKKFDLQ 741
            L +  +L  V  L+  +     +R  + +LPPGP P+P+IGNL  +G KPH++L+ +   +GPI+ LRLG V  VV +S S+A+  L+ HD +F  R        + + + +  L + P    W+ LRKIS++H+F+++ L+  + +R++++  L     +  R G K +++GQ      +N     ++   +F  D  +    EFR  V+ ++  AG  N+ D  P L   DLQ
Sbjct:    4 LFLTILLATVLFLILRIFSHRRNRSHNNRLPPGPNPWPIIGNLPHMGTKPHRTLSAMVTTYGPILHLRLGFVDVVVAASKSVAEQFLKIHDANFASRPPNSGAKHMAYNYQD--LVFAPYGHRWRLLRKISSVHLFSAKALEDFKHVRQEEVGTL---TRELVRVGTKPVNLGQLVNMCVVNALGREMIGRRLFGAD-ADHKADEFRSMVTEMMALAGVFNIGDFVPSLDWLDLQ 232          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.286e-25
Identity = 77/221 (34.84%), Postives = 116/221 (52.49%), Query Frame = 1
Query:   88 TLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSNTIFSIDL-VNP--NEREFRDTVSGILEEAGKPNLSDHFPLLKKFDLQ 741
            T +++  L  ++ GR  +LPPGPR +PVIG L  LGA PH SLAK+AK +G IM L++G    VV S+P  AKA L+  DL+F +R        L +   +  + +      WK LRK+SN+H+   + L+    +R  ++  +L  + D  R G+ + V +       N++   I S  + VN      EF+D V  ++  AG  N+ D  P L   DLQ
Sbjct:   17 THIFISTLLSITNGR--RLPPGPRGWPVIGALPLLGAMPHVSLAKMAKKYGAIMYLKVGTCGMVVASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYGAQD--MVFAHYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMFDMSREGERVVVAEMLTFAMANMIGQVILSKRVFVNKGVEVNEFKDMVVELMTTAGYFNIGDFIPCLAWMDLQ 233          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.899e-25
Identity = 74/225 (32.89%), Postives = 116/225 (51.56%), Query Frame = 1
Query:   82 VFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLN-----LLSNTIFSIDLVNPNEREFRDTVSGILEEAGKPNLSDHFPLLKKFDLQ 741
            +F +  ++  + +S+   + LPPGPR +PVIG L  LGA PH SLAK+AK +G IM L++G     V S+P  AKA L+  D++F +R  P    +    ++   + +      WK LRK+SN+H+   + L+    +R  ++  +L  + D  R G+ + V +       N     +LS  +F    V  N  EF+D V  ++  AG  N+ D  P L   DLQ
Sbjct:   13 IFLIAHIIISTLISKTTGRHLPPGPRGWPVIGALPLLGAMPHVSLAKMAKKYGAIMYLKVGTCGMAVASTPDAAKAFLKTLDINFSNR--PPNAGATHLAYNAQDMVFAHYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMSDMSREGQRVVVAEMLTFAMANMIGQVMLSKRVFVDKGVEVN--EFKDMVVELMTIAGYFNIGDFIPCLAWMDLQ 233          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.092e-25
Identity = 75/227 (33.04%), Postives = 117/227 (51.54%), Query Frame = 1
Query:   70 ILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPE-AILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSN-TIFSIDLVNPNE-REFRDTVSGILEEAGKPNLSDHFPLLKKFDLQ 741
            ++ LV T+V+   L    +   K LPP P+  P+IG+L  +   PH+   KL+  HGPIM L LG V  VV S+   AK  L+ H+++F +R     A+  L +   +F  A+ P    WK ++K+    + + + +D    +R+++ K  ++ V     AG+A+D G      S N++S  T+      N N+  E +  VS I E  GK N+SD    LK FDLQ
Sbjct:    7 LICLVSTIVFAYILW--RKQSKKNLPPSPKALPIIGHLHLVSPIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVKGLAYDSQDFLFAFAPFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQETKRFISRVFRKGVAGEAVDFGDELMTLSNNIVSRMTLSQKTSENDNQAEEMKKLVSNIAELMGKFNVSDFIWYLKPFDLQ 231          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.092e-25
Identity = 69/226 (30.53%), Postives = 118/226 (52.21%), Query Frame = 1
Query:   79 LVFTLVWVMALSFVSRG--RHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSNTIFSIDLV---NPNEREFRDTVSGILEEAGKPNLSDHFPLLKKFDLQ 741
            +++ +V+++    ++ G  R ++LPPGP  +PVIG L  LG  PH +LAK+AK +GPIM L++G    VV S+P+ AKA L+  D++F +R  P    +    ++   + + P    WK LRK+SN+H+   + L+    +R  ++  +L  + D    G+ I V         N++   + S  +         EF++ V  ++  AG  N+ D  P +   DLQ
Sbjct:   13 IIYIIVYIIIQKLIATGSWRRRRLPPGPEGWPVIGALPLLGGMPHVALAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNR--PPNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMFDASHVGERIVVADMLTFAMANMIGQVMLSKRVFVEKGKEVNEFKNMVVELMTVAGYFNIGDFIPQIAWMDLQ 236          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.092e-25
Identity = 69/227 (30.40%), Postives = 124/227 (54.63%), Query Frame = 1
Query:   76 WLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGK-AIDVGQAAFNTSLNLLSNTI----FSIDLVNPNEREFRDTVSGILEEAGKPNLSDHFPLLKKFDLQ 741
            ++ F   W++  S     R+++LPPGP P+P+IGN  ++    H++L  LA+ +GPI+ LR G V TVVVSS   AK  L+ HDL F  R  P   +   F ++   +A+ P    W+ +RKI  + + TS+++++ + +R++++  ++  + +   +G+ A++V +A   +  N+L   +    FS + +  + + F D V  +    G  N+ D  P L   DLQ
Sbjct:   24 FIFFFSCWILHQS----QRNERLPPGPYPWPIIGNFHQVRLPLHRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASR--PPTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSIWEESESGRIAVNVSKAISTSLANILWRILARKKFSDNDLGADGKGFADLVVEVSIAVGSLNIGDFIPYLDCLDLQ 244          
The following BLAST results are available for this feature:
BLAST of DR403254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
C71BA_ARATH7.105e-2729.86Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71BV_ARATH2.700e-2630.49Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71BD_ARATH2.700e-2628.70Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C71BB_ARATH3.526e-2627.60Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
F3PH_ARATH7.855e-2631.06Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C75A3_PETHY2.286e-2534.84Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C75A1_PETHY3.899e-2532.89Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C93A1_SOYBN5.092e-2533.04Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C75A2_SOLME5.092e-2530.53Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C75A1_PINTA5.092e-2530.40Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAF-PNP1244F14 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244F14 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403254 ID=DR403254; Name=DR403254; organism=Citrus sinensis; type=EST; length=741bp
GGGGAGTTTCAAATANNNAGAAATCAAAATATCAACNNNNATTCAAAGAT
GGATTTGTTAATTAACTGCATACTGTGGCTTGTATTCACATTGGTTTGGG
TGATGGCTTTAAGTTTCGTTTCCAGAGGACGACACAAACAGCTTCCACCG
GGACCGAGGCCTTATCCAGTGATCGGAAACCTTCTGGAGCTAGGTGCTAA
ACCTCACAAGTCACTGGCCAAGCTTGCCAAGATTCATGGGCCCATAATGA
GTCTAAGACTTGGCCAGGTGACCACAGTAGTGGTTTCTTCTCCAAGCATG
GCCAAAGCCATCCTTCAAAATCATGATTTATCATTCTGTGATCGAATGGT
CCCTGAAGCAATCTTGTCACTGCCCTTCCCGCACCATGAATTCAGTTTGG
CCTGGCTTCCAGTTTCAACAATGTGGAAAAATCTTCGAAAAATAAGCAAC
ATGCATATTTTCACTAGCCAGAAACTCGATGCCAATCAAGAGCTCCGGCG
CAAGAAAATCAAAGACCTTCTTGCTCATGTTGAAGACAATTGCCGTGCGG
GTAAAGCAATAGATGTTGGCCAAGCTGCTTTCAATACTTCACTTAATTTA
TTATCCAACACAATTTTTTCTATTGATTTGGTTAATCCCAATGAGCGAGA
GTTTAGGGATACAGTTTCTGGTATCTTGGAAGAAGCAGGAAAGCCTAACT
TGTCCGACCATTTTCCTCTTCTCAAAAAGTTTGATCTGCAG
back to top