DR403254

Overview
NameDR403254
Unique NameDR403254
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:292..1032. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: CP17A_FELCA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Felis catus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.204e-11
Identity = 58/194 (29.90%), Postives = 94/194 (48.45%), Query Frame = 1
Query:  166 PVIGNLLEL--GAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVED-NCRAGKAIDVGQAAFNTSLNLLSNTIFSIDLVN--PNEREFRDTVSGILEEAGKPNLSDHFPLLKKF 732
            P++G+LL L     PHK+  KL K +GPI S RLG  TTV+V    +AK +L      F  R  P  +       ++  +A+      W+  RK++ +  F   K D +Q L +   +++    ++   + G++ID+    F    N++    F+    N  P  +  ++   GIL+  GK NL D FP+LK F
Sbjct:   35 PLVGSLLFLPRSGHPHKNFFKLQKKYGPIYSFRLGTKTTVMVGDHQLAKEVLVKKGKEFSGR--PHVVTLDILSDNQKGIAFADHGASWQMHRKLA-LATFALFK-DGDQRLEKIICREISLLCDNLAMQDGQSIDLYLPLFLAVTNIICLICFNSSFKNGDPALKIIQNYNEGILKTLGKDNLVDIFPVLKIF 224          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.204e-11
Identity = 44/178 (24.72%), Postives = 95/178 (53.37%), Query Frame = 1
Query:   49 MDLLINCILWLVFTLVWVMALSFVSRGRHK--QLPPGPRPYPVIGNLLELGA-KPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQ 573
            MDLL+     ++  LV   A  F+     K  +LPPGP+  P+IGNL ++    P   L +L+K++GPI ++++G     V+SS  +AK +L+  DL+F  R + +   ++ +   E  L +   +  ++ +RK+  +++F+  ++ + + +R ++ + ++  +         +D+ +
Sbjct:    1 MDLLL-----IIAGLVAAAAFFFLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRE--LGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSE 171          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.204e-11
Identity = 55/216 (25.46%), Postives = 103/216 (47.69%), Query Frame = 1
Query:  127 GRHKQLPPGPRPYPVIGNL-LELGAK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGK------AIDV----GQAAFNTSLNLLSNTIF-SIDLVNPNEREFRDTVSGILEEAGKPNLSDHFPLLKKFD 735
            G  K+ P     +P+ G+L L +G+K PHK+L  LA+ HGP+ +++LG    +VVS   MA+     +D++   R  P+ +++    ++   L   P    W+ LRKI    I +S +++  Q++R  ++++ +  + D  R+ K      ++++     Q  FN  L ++    F S    +    +    V   +  AG   + D  P L+  D
Sbjct:   35 GSSKEAPTVGGAWPIFGHLPLLIGSKSPHKALGALAEKHGPLFTIKLGAKKALVVSDWEMARECFTTNDVAVSAR--PKLLVAELMCYNNAMLLVAPYGPYWRELRKIIVTEILSSSRVEQLQDVRVSEVQNSIVELYDVWRSQKNESDYASVELKQWFAQPIFNMVLRMVVGKRFLSATATDEKAEKCVKAVDEFMRLAGVFTVGDAIPYLRWLD 248          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.465e-11
Identity = 42/101 (41.58%), Postives = 57/101 (56.44%), Query Frame = 1
Query:   49 MDLLINCILWLVFTLVWVMALSFVS-RGRHKQLPPGPRPYPVIGNLLELGAK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDR 345
            MDLL+     L   +   +A++    RG+  +LPPGP P PV GN L++G    H++L  LAK  G I  LR+GQ   VVVSSP +AK +L    + F  R
Sbjct:    1 MDLLLLEKTLLALFIAATIAITISKLRGKRFKLPPGPIPVPVFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSR 101          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.138e-11
Identity = 45/140 (32.14%), Postives = 72/140 (51.43%), Query Frame = 1
Query:   55 LLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPH-KSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQ 471
            LL   +L L    +  + +S + RG+  +LPPGP P PV GN L++G   + ++L   AK  G +  LR+GQ   VVVSSP +AK +L    + F  R     ++   F      + +   S  W+ +R+I  +  FT++
Sbjct:    6 LLEKALLGLFIATIVAITISKL-RGKKLKLPPGPIPVPVFGNWLQVGDDLNQRNLVDYAKKFGDLFMLRMGQRNLVVVSSPELAKDVLHTQGVEFGSR--TRNVVFDIFTGKGQDMVFTVYSEHWRKMRRIMTVPFFTNK 142          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11
Identity = 51/188 (27.13%), Postives = 84/188 (44.68%), Query Frame = 1
Query:   55 LLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSNTI 615
            LL+   L  +F    +       RG+  +LPPGP P P+ G  L++G    H++L   AK  G I  LR+GQ   VVVSSP +AK +L    + F  R     ++   F      + +      W+ +R+I  +  FT++ +   +     + + ++  V++N  A     VG       L L+   I
Sbjct:    4 LLLEKTLLALFIAATIAVTISKLRGKRFKLPPGPIPVPIFGYWLQVGDDLNHRNLTDYAKRFGEIFLLRMGQRNLVVVSSPELAKEVLHTQCVEFGSR--TRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWESEAESVVNDVKNNAEA----SVGGIVIRKRLQLMMYNI 185          
The following BLAST results are available for this feature:
BLAST of DR403254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
CP17A_FELCA3.204e-1129.90Steroid 17-alpha-hydroxylase/17,20 lyase OS=Felis ... [more]
C83B1_ARATH3.204e-1124.72Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C82A4_SOYBN3.204e-1125.46Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
TCMO_CICAR5.465e-1141.58Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
TCMO_PETCR7.138e-1132.14Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
TCMO_MEDSA9.322e-1127.13Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244F14 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244F14 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403254 ID=DR403254; Name=DR403254; organism=Citrus sinensis; type=EST; length=741bp
GGGGAGTTTCAAATANNNAGAAATCAAAATATCAACNNNNATTCAAAGAT
GGATTTGTTAATTAACTGCATACTGTGGCTTGTATTCACATTGGTTTGGG
TGATGGCTTTAAGTTTCGTTTCCAGAGGACGACACAAACAGCTTCCACCG
GGACCGAGGCCTTATCCAGTGATCGGAAACCTTCTGGAGCTAGGTGCTAA
ACCTCACAAGTCACTGGCCAAGCTTGCCAAGATTCATGGGCCCATAATGA
GTCTAAGACTTGGCCAGGTGACCACAGTAGTGGTTTCTTCTCCAAGCATG
GCCAAAGCCATCCTTCAAAATCATGATTTATCATTCTGTGATCGAATGGT
CCCTGAAGCAATCTTGTCACTGCCCTTCCCGCACCATGAATTCAGTTTGG
CCTGGCTTCCAGTTTCAACAATGTGGAAAAATCTTCGAAAAATAAGCAAC
ATGCATATTTTCACTAGCCAGAAACTCGATGCCAATCAAGAGCTCCGGCG
CAAGAAAATCAAAGACCTTCTTGCTCATGTTGAAGACAATTGCCGTGCGG
GTAAAGCAATAGATGTTGGCCAAGCTGCTTTCAATACTTCACTTAATTTA
TTATCCAACACAATTTTTTCTATTGATTTGGTTAATCCCAATGAGCGAGA
GTTTAGGGATACAGTTTCTGGTATCTTGGAAGAAGCAGGAAAGCCTAACT
TGTCCGACCATTTTCCTCTTCTCAAAAAGTTTGATCTGCAG
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