DR403249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403249 vs. ExPASy Swiss-Prot
Match: UBL1_SCHPO (Ubiquitin-like protein 1 OS=Schizosaccharomyces pombe GN=ubl1 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17 Identity = 40/77 (51.95%), Postives = 57/77 (74.03%), Query Frame = 1 Query: 235 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGT 465 M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG+ Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGGS 77 HSP 2 Score: 70.8626 bits (172), Expect = 7.003e-12 Identity = 37/68 (54.41%), Postives = 41/68 (60.29%), Query Frame = 1 Query: 466 MIKVKTLTGKXXXXXXXXXXXXXXXXXXXXXXXGIPPVQQRLIYAGKQLADDKTARDYNIEGGSVLHL 669 +IKVKTLTGK GIPP QQRLIYAGKQ+ADDK A Y++EGGSVLHL Sbjct: 2 LIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHL 69
BLAST of DR403249 vs. ExPASy Swiss-Prot
Match: RUB1_YEAST (NEDD8-like protein RUB1 OS=Saccharomyces cerevisiae GN=RUB1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15 Identity = 40/76 (52.63%), Postives = 57/76 (75.00%), Query Frame = 1 Query: 235 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 462 M + VKTLTGK I++E++ SD + ++K +++KEGIPP QQRLIF GKQ++D T+ D ++ + LHLVL LRGG Sbjct: 1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76
BLAST of DR403249 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.539e-11 Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 1 Query: 235 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 462 M++F++TLTG L V +T+ +VKAKI+ EGIP +Q LI+ +LE+ L DYNI + TL LVL +RGG Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGG 103 The following BLAST results are available for this feature:
BLAST of DR403249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403249 ID=DR403249; Name=DR403249; organism=Citrus sinensis; type=EST; length=669bpback to top |