DR403237

Overview
NameDR403237
Unique NameDR403237
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9906 contig Csv1_Contig9906:23..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.526e-37
Identity = 85/187 (45.45%), Postives = 123/187 (65.78%), Query Frame = 3
Query:  195 GSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVI 743
            G    + ++V++EE  ++  AM L SA VLP V +A + LD+L+I+ KAGPGA LS +++ASQ+PTKNPE A  MLDR+L LL S++IL  S  T       RLY L PV K+   +++GVS+     ++ DKV++  W+ LKD +L+G + +NKA GM  +DY GTD RFN+VFN GM   ++  +
Sbjct:    5 GETQMTPTQVSDEEANLF--AMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPE-APVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITM 188          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.993e-37
Identity = 84/188 (44.68%), Postives = 124/188 (65.96%), Query Frame = 3
Query:  192 MGSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST---HGV-RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVI 743
            MGS T +  ++ ++EEE +  AM L SA VLP V ++ + LD+L++I K+G GA +S  ++A+Q+PT NP+ A  MLDR+L LL S+ IL C   T    GV RLY LAPV K+   +++GVSM P   ++ DKV+M  W+ L D +++G + +NKA GM  ++Y GTD RFN+VFN GM   ++  +
Sbjct:    1 MGSATNTP-QINSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTTNPD-AHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITM 186          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.603e-37
Identity = 86/180 (47.78%), Postives = 117/180 (65.00%), Query Frame = 3
Query:  192 MGSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGM 719
            MGS  +++       +E  + AM L S+ VLP V +  + LD+L+I+ KAGPGA LS S+IAS +PTKNP+ A  MLDR+L LL S++IL CS          RLY LA V K+   +++GVS+ P   ++ DKV+M  W+ LKD ILEG + +NKA GM  ++Y GTD RFN+VFN GM
Sbjct:    1 MGSTGETQMSPAQILDEEANFAMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPD-APVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGM 179          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.759e-36
Identity = 86/186 (46.24%), Postives = 121/186 (65.05%), Query Frame = 3
Query:  192 MGSFTKSKSKVTN---EEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKA---GPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGM 719
            MGS   +++++T     +EE    AM L SA VLP V +A + LDVL+I+ K+   G GA +S +EIA+Q+PT NP+ A  MLDRVL LL S++++ CS          RLY LAPV K+   +++GVS+ P   ++ DKV+M  W+ LKD IL+G + +NKA GM  ++Y GTD RFN+VFN GM
Sbjct:    1 MGSTGNAETQLTPTHVSDEEANLFAMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQLPTTNPD-APVMLDRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCKFLTKNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGM 185          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.909e-36
Identity = 84/180 (46.67%), Postives = 115/180 (63.89%), Query Frame = 3
Query:  192 MGSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGM 719
            MGS  +++       +E  + A+ L S+ VLP V +  + LD+L+I+ KAGPGA L  S+IAS +PTKNP  A  MLDR+L LL S++IL CS          RLY LA V K+   +++GVS+ P   ++ DKV+M  W+ LKD ILEG + +NKA GM  ++Y GTD RFN+VFN GM
Sbjct:    1 MGSTGETQMSPAQILDEEANFALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPN-APVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGM 179          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.156e-35
Identity = 70/177 (39.55%), Postives = 111/177 (62.71%), Query Frame = 3
Query:  225 TNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTHG----VRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVI 743
            +N++++ +  AM L SA VLP V +  + LD+L+ I KAGP   +S+SE+ +Q+P  N   A  M+DR+  LL S+++L C+          R Y LAPV K+ + +  GVS+ P + ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y G D RFN+VFN+GM   ++  +
Sbjct:    3 SNQDDQAFLFAMQLASASVLPMVLKTAIELDLLETIAKAGPHGSVSSSELVAQLPKVNNPEAPVMIDRICSLLASYSVLTCTLKETADGCAERFYGLAPVCKFLIKNDAGVSLAPLLLMNQDKVLMESWYYLKDPVLDGGIPFNKAYGMSAFEYHGKDQRFNKVFNSGMFNHSTMTM 179          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.427e-35
Identity = 82/179 (45.81%), Postives = 120/179 (67.04%), Query Frame = 3
Query:  219 KVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCS---FSTHGV-RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVI 743
            +VT++E  ++  AM L SA VLP   ++ + LD+L+I+ K G  + +S +EIAS++PTKNPE A  MLDR+L LL S+++L CS    S  GV R+Y L PV KY   +++GVS+     ++ DKV+M  W+ LKD IL+G + +NKA GM  ++Y GTD RFN+VFNNGM   ++  +
Sbjct:   13 QVTDDEAALF--AMQLASASVLPMALKSALELDLLEIMAKNG--SPMSPTEIASKLPTKNPE-APVMLDRILRLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTKNEDGVSIAALCLMNQDKVLMESWYHLKDAILDGGIPFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITM 186          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.427e-35
Identity = 81/177 (45.76%), Postives = 115/177 (64.97%), Query Frame = 3
Query:  228 NEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKA-GPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSF----STHGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVI 743
            + +EE    AM L SA VLP   +A + LDVL+I+ K+  P   +S +EIA+Q+PT NPE A  MLDRVL LL S++++  +     S    RLY LAPV K+   +++GVS+ P++  + DKV++  WF LKD ILEG + +NKA GM+ +DY GTD RFN+VFN GM   ++  +
Sbjct:   16 SSDEEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPE-APVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLTATDKVLLEPWFYLKDAILEGGIPFNKAYGMNEFDYHGTDHRFNKVFNKGMSSNSTITM 191          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.258e-35
Identity = 74/167 (44.31%), Postives = 111/167 (66.47%), Query Frame = 3
Query:  255 AMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVI 743
            AM L +A VLPAV  A + LD+L+I+ +AGPGA L+  E+ASQ+PT+NP+ A  MLDR+  LL S+++L C+          RLY LAP+ K+ V +++GVS+ P   +  D+V +  W+ +KD ILEG + ++KA GM  +DY GTD RFN++FN  M   ++ ++
Sbjct:    5 AMQLATASVLPAVLTAAIELDLLEIMARAGPGAYLTPGEVASQLPTQNPD-APVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMM 170          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.616e-32
Identity = 73/156 (46.79%), Postives = 103/156 (66.03%), Query Frame = 3
Query:  255 AMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSF-STHGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGM 719
            AM L SA VLP V ++ + LD+L+II   G    +S +EIAS +PT NP+  A M+DR+L LL  ++++ CS  S    R+Y LAPV KY   +Q+GVS+     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM
Sbjct:    4 AMQLASASVLPMVLKSAIELDLLEIIR--GQDTCMSPTEIASHLPTTNPDAPA-MVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGM 156          
The following BLAST results are available for this feature:
BLAST of DR403237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
COMT1_ROSCH1.526e-3745.45Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_OCIBA1.993e-3744.68Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT3_POPKI2.603e-3747.78Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_CLABR3.759e-3646.24Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT2_POPTM4.909e-3646.67Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_ZINEL4.156e-3539.55Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
OMT1_ARATH5.427e-3545.81Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
IEMT_CLABR5.427e-3545.76(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT1_EUCGL9.258e-3544.31Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
OMT1_CHRAE5.616e-3246.79Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244E13 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244E13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403237 ID=DR403237; Name=DR403237; organism=Citrus sinensis; type=EST; length=745bp
GGGGACGGAGTGAGATTCTCACTCCCTTCTCATTTAAAAGAAATAAACAC
TGGTATGGAAGGAATTCACGCTCCTCACCCACTCCCGTAAGTAAAGACAG
CATAAACACAGCATAAGAGTAGTGGTATAAAAGATTCAAAAACACTAAGC
TAAGAGCAAAGCAAAGCAGGAGCAAGAAATTAAACGCGCAAATGGGTTCT
TTCACTAAGAGCAAATCAAAAGTGACCAATGAAGAGGAAGAGGTATATTC
ACATGCCATGGTACTGGGAAGTGCAATAGTGCTACCCGCGGTTTTTCAAG
CAGTAGTAAATCTTGATGTTCTTGATATCATAAACAAAGCTGGTCCTGGT
GCTGAGCTTTCTGCTTCAGAGATTGCTTCTCAAATTCCCACCAAAAATCC
TGAGGGTGCTGCCAAGATGTTGGATCGGGTTCTCGGGCTTCTGGTGAGCT
TCAATATCCTTTGTTGCTCTTTCAGTACTCATGGAGTAAGGCTCTACAGT
CTCGCTCCTGTCGCTAAATACTATGTGAGTGATCAAAACGGCGTCTCAAT
GCGTCCCTATATGAACTTGTCTCTTGACAAAGTAATGATGCCTGGCTGGT
TCCAATTAAAAGACCAAATTCTTGAAGGAGAACTTTCGTATAATAAAGCC
CTCGGAATGGATTTCTACGATTATCTGGGCACCGACTCCAGGTTCAATGA
AGTTTTCAACAATGGAATGATCGGCCAGACTTCTTTTGTAATCAA
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