DR403237

Overview
NameDR403237
Unique NameDR403237
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9906 contig Csv1_Contig9906:23..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.134e-31
Identity = 72/156 (46.15%), Postives = 102/156 (65.38%), Query Frame = 3
Query:  255 AMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSF-STHGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGM 719
            AM L  A VLP V ++ + LD+L+II   G    +S +EIAS +PT NP+  A M+DR+L LL  ++++ CS  S    R+Y LAPV KY   +Q+GVS+     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN+VFN GM
Sbjct:    4 AMQLACASVLPMVLKSAIELDLLEIIR--GQDTCMSPTEIASHLPTTNPDAPA-MVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGM 156          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.640e-31
Identity = 77/186 (41.40%), Postives = 108/186 (58.06%), Query Frame = 3
Query:  195 GSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTH---GVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVI 743
            G++T+ K+   +++E++   A+ L +A   P + ++   L +LDI +KAG G  +S SEIASQI  KNP  A  +LDR+L LL S ++L C          R+Y  AP+  Y  S+    S+ P + L  DKVMM  WF L D ILEG + + +A GM  +DY GTD RFN VFN GM   T  V+
Sbjct:    7 GNYTQPKT--LDKDEQLAGLAVTLANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPN-APVLLDRMLRLLASHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVM 189          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.209e-28
Identity = 70/183 (38.25%), Postives = 108/183 (59.02%), Query Frame = 3
Query:  192 MGSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPG--AELSASEIASQIPT--KNPEGAAKMLDRVLGLLVSFNILCCSFSTHGVRL---YSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGM 719
            MGS     + V +EE  +Y  AM L S+ +LP   +  + L +L+++ K   G  A L+  E+ +++P    +P  AA M+DR+L LL S++++ C       R    YS APV K+   +++GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD+RFN VFN GM
Sbjct:    1 MGSTAGDVAAVVDEEACMY--AMQLASSSILPMTLKNAIELGLLEVLQKEAGGGKAALAPEEVVARMPAAPSDPAAAAAMVDRMLRLLASYDVVRCQMEDRDGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGM 181          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.767e-28
Identity = 69/186 (37.10%), Postives = 107/186 (57.53%), Query Frame = 3
Query:  192 MGSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKA------GPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTHG----VRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGM 719
            MGS     +   +EE  +Y  A+ L S+ +LP   +  + L +L+ +  A      G  A L+ +E+A ++P+K    AA M+DR+L LL S+N++ C           R Y+ APV K+   +++GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD+RFN VFN GM
Sbjct:    1 MGSTAADMAAAADEEACMY--ALQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGM 184          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.426e-28
Identity = 71/182 (39.01%), Postives = 108/182 (59.34%), Query Frame = 3
Query:  192 MGSFTKSKSKVTNEEEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGP-GAELSASEIASQIPTK--NPEGAAKMLDRVLGLLVSFNILCCSFSTHG---VRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGM 719
            MGS  +  + V +EE  +Y  AM L SA +LP   +  + L +L+++    P G  L+  E+ +++P    NP+ AA M+DR+L LL S++++ C          R YS APV K+   +++GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN VFN GM
Sbjct:    1 MGSTAEDVAAVADEEACMY--AMQLASASILPMTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPD-AADMVDRMLRLLASYDVVKCQMEDKDGKYERRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGM 179          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.062e-22
Identity = 60/159 (37.74%), Postives = 98/159 (61.64%), Query Frame = 3
Query:  246 YSHAMVLGSAIVLPAVFQAVVNLDVLDIINKAGPGAELSASEIASQIPTKNPEGAAKMLDRVLGLLVSFNILCCSFSTHGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQIL-EGELSYNKALGMDFYDYLGTDSRFNEVFNNGM 719
            Y   + L   I LP   +A + L+V +II++AGP A+LS S+I ++IPTKNP  AA  LDR+L +L + +IL  S +  G R+Y L   ++  V+ ++ VS+ P +  + DK ++  ++ +KD +L EG + +++  GMDF+ Y G + R N+ FN  M
Sbjct:   39 YLSGLGLSRLICLPMALRAAIELNVFEIISQAGPDAQLSPSDIVAKIPTKNP-SAAISLDRILRMLGASSILSVSTTKSG-RVYGLNEESRCLVASEDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAM 195          
BLAST of DR403237 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.705e-17
Identity = 52/170 (30.59%), Postives = 91/170 (53.53%), Query Frame = 3
Query:  234 EEEVYSHAMVLGSAIVLPAVFQAVVNLDVLDIINKA-GPGAELSASEIASQIPTKNPEG-AAKMLDRVLGLLVSFNILCCSFST----HGVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELS-YNKALGMDFYDYLGTDSRFNEVFNNGMI 722
            E+     AMVL + +V PAV  A ++L++ +II KA  PGA +S SEIAS++P           LDR+L LL S+++L  +  T       R+Y L+ V KY V D++   +  +        ++  W   K+ +++ ++  +    G+  Y+++G D + N++FN  M+
Sbjct:   21 EDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMV 190          
The following BLAST results are available for this feature:
BLAST of DR403237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
OMT2_CHRAE2.134e-3146.15Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
IMT1_MESCR3.640e-3141.40Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
COMT1_MAIZE2.209e-2838.25Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
OMT1_ORYSJ3.767e-2837.10Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
COMT1_SACOF6.426e-2839.01Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
SMT_COPJA1.062e-2237.74(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA8.705e-1730.59Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244E13 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244E13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403237 ID=DR403237; Name=DR403237; organism=Citrus sinensis; type=EST; length=745bp
GGGGACGGAGTGAGATTCTCACTCCCTTCTCATTTAAAAGAAATAAACAC
TGGTATGGAAGGAATTCACGCTCCTCACCCACTCCCGTAAGTAAAGACAG
CATAAACACAGCATAAGAGTAGTGGTATAAAAGATTCAAAAACACTAAGC
TAAGAGCAAAGCAAAGCAGGAGCAAGAAATTAAACGCGCAAATGGGTTCT
TTCACTAAGAGCAAATCAAAAGTGACCAATGAAGAGGAAGAGGTATATTC
ACATGCCATGGTACTGGGAAGTGCAATAGTGCTACCCGCGGTTTTTCAAG
CAGTAGTAAATCTTGATGTTCTTGATATCATAAACAAAGCTGGTCCTGGT
GCTGAGCTTTCTGCTTCAGAGATTGCTTCTCAAATTCCCACCAAAAATCC
TGAGGGTGCTGCCAAGATGTTGGATCGGGTTCTCGGGCTTCTGGTGAGCT
TCAATATCCTTTGTTGCTCTTTCAGTACTCATGGAGTAAGGCTCTACAGT
CTCGCTCCTGTCGCTAAATACTATGTGAGTGATCAAAACGGCGTCTCAAT
GCGTCCCTATATGAACTTGTCTCTTGACAAAGTAATGATGCCTGGCTGGT
TCCAATTAAAAGACCAAATTCTTGAAGGAGAACTTTCGTATAATAAAGCC
CTCGGAATGGATTTCTACGATTATCTGGGCACCGACTCCAGGTTCAATGA
AGTTTTCAACAATGGAATGATCGGCCAGACTTCTTTTGTAATCAA
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