DR403231

Overview
NameDR403231
Unique NameDR403231
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig567 contig Csv1_Contig567:25..720. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403231 vs. ExPASy Swiss-Prot
Match: CYTM_SOLTU (Multicystatin OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.048e-13
Identity = 38/109 (34.86%), Postives = 61/109 (55.96%), Query Frame = 2
Query:   83 RLTQKTMATVGGVREVEATANNQGIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA*LV 409
            +L    +A +GG+ +V    NN    +LARFA+  +NKK+N +L+F            G +Y ITL A++ G+KK++E K+W K W  FK++ EF  V    + T  ++
Sbjct:  184 KLVGDDIAKLGGITDVPFP-NNPEFQDLARFAIQVYNKKENVHLEFVENLNVKQQVVAGMMYYITLAAIDAGKKKIYETKIWVKEWEDFKKVVEFKLVGDDSAKTGGII 291          

HSP 2 Score: 76.6406 bits (187), Expect = 1.369e-13
Identity = 39/98 (39.80%), Postives = 58/98 (59.18%), Query Frame = 2
Query:   83 RLTQKTMATVGGVREVEATANNQGIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTV 376
            +L     A +GG+  V    NN    +LARFAV ++NKK+N++L+F            G LY ITL A++ G+KK++EAK+W K W  FK++ EF  +
Sbjct:  467 KLVGDDSAKLGGIINVPFP-NNPEFQDLARFAVQDYNKKENAHLEFVENLNVKEQLVAGMLYYITLVAIDAGKKKIYEAKIWVKEWENFKKVIEFKLI 563          

HSP 3 Score: 75.8702 bits (185), Expect = 2.335e-13
Identity = 37/103 (35.92%), Postives = 59/103 (57.28%), Query Frame = 2
Query:  104 ATVGGVREVEATANNQGIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA*LVV 412
            A +GG  +V    NN    +LARFAV ++NKK+N++L++            G +Y ITL A + G+KK++EAK+W K W  FK++ EF  V    +    +++
Sbjct:  568 AIIGGFTDVPFP-NNPEFQDLARFAVQDYNKKENAHLEYVENLNVKEQLVAGMIYYITLVATDAGKKKIYEAKIWVKEWEDFKKVVEFKLVGDDSAKPGGIII 669          

HSP 4 Score: 70.0922 bits (170), Expect = 1.281e-11
Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = 2
Query:  110 VGGVREVEATANNQGIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTV 376
            +GG  EV    N+    +L RFAV ++NK QN++L+F            G LY IT  A +GG+KK++E K+W K W  FK++ EF  V
Sbjct:  382 LGGFTEVPFP-NSPEFQDLTRFAVHQYNKDQNAHLEFVENLNVKKQVVAGMLYYITFAATDGGKKKIYETKIWVKVWENFKKVVEFKLV 469          

HSP 5 Score: 68.9366 bits (167), Expect = 2.855e-11
Identity = 36/89 (40.45%), Postives = 52/89 (58.43%), Query Frame = 2
Query:  113 GGVREVEATANNQGIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAV-EGGQKKLFEAKVWEKPWMQFKELKEFNTV 376
            GG+  V    NN     LARFA+ ++NKKQN++L+F            G +Y ITL A  + G+KK+++AK+W K W  FK++ EF  V
Sbjct:   99 GGIVNVP-NPNNTKFQELARFAIQDYNKKQNAHLEFVENLNVKEQVVAGIMYYITLAATDDAGKKKIYKAKIWVKEWEDFKKVVEFKLV 186          

HSP 6 Score: 67.3958 bits (163), Expect = 8.306e-11
Identity = 36/98 (36.73%), Postives = 52/98 (53.06%), Query Frame = 2
Query:   83 RLTQKTMATVGGVREVEATANNQGIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTV 376
            +L     A  GG+  V    N+    +LARFAV ++N  QN++L+F            G +Y ITL A + G KK +EAK+W K W  FK++ +F  V
Sbjct:  278 KLVGDDSAKTGGIINVP-NPNSPEFQDLARFAVQDYNNTQNAHLEFVENLNVKEQLVSGMMYYITLAATDAGNKKEYEAKIWVKEWEDFKKVIDFKLV 374          
BLAST of DR403231 vs. ExPASy Swiss-Prot
Match: CYT3_ORYSJ (Cysteine proteinase inhibitor 3 OS=Oryza sativa subsp. japonica GN=Os05g0409300 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.335e-13
Identity = 36/78 (46.15%), Postives = 47/78 (60.26%), Query Frame = 2
Query:  167 ARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA 400
            ARFAV E+NK Q + L+F            GTL+D+ LE V+ G+K L+ AKVW KPW+ FK + EF  V  S S +A
Sbjct:   64 ARFAVAEYNKNQGAELEFARIVKAKRQVVTGTLHDLMLEVVDSGKKSLYSAKVWVKPWLDFKAVVEFRHVGDSQSQSA 141          
BLAST of DR403231 vs. ExPASy Swiss-Prot
Match: CYT2_ORYSJ (Cysteine proteinase inhibitor 2 OS=Oryza sativa subsp. japonica GN=Os05g0494200 PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 37/88 (42.05%), Postives = 50/88 (56.82%), Query Frame = 2
Query:  110 VGGVREVEATANNQ-GIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVE-GGQKKLFEAKVWEKPWMQFKELKEF 367
            VGG+ +  A   N    V LARFAV EHN K N+ L+             G ++ +T+E  E GG  KL+EAKVWE+ W  FK+L++F
Sbjct:   56 VGGIHDAPAGRENDLTTVELARFAVAEHNSKANAMLELERVVKVRQQVVGGFMHYLTVEVKEPGGANKLYEAKVWERAWENFKQLQDF 143          
The following BLAST results are available for this feature:
BLAST of DR403231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CYTM_SOLTU1.048e-1334.86Multicystatin OS=Solanum tuberosum PE=2 SV=1[more]
CYT3_ORYSJ2.335e-1346.15Cysteine proteinase inhibitor 3 OS=Oryza sativa su... [more]
CYT2_ORYSJ4.869e-1142.05Cysteine proteinase inhibitor 2 OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244E07 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403231 ID=DR403231; Name=DR403231; organism=Citrus sinensis; type=EST; length=696bp
GGGGGCGTCGCCCTTGTCTCTTGCTCCATAAGGAAAGTAGAAAAACACAA
CAACTTAAAATCTTTCTCATCGCTTTATCATCAGACTTACGCAGAAAACA
ATGGCTACAGTAGGCGGTGTTCGTGAGGTTGAAGCAACAGCCAACAATCA
GGGGATCGTTAATCTCGCACGCTTCGCTGTGGATGAGCATAACAAGAAGC
AGAATTCAAATCTGCAATTTGTAAAAGTTGTAAGTGCGAAGCAGCAAGTG
GTTTCAGGGACTCTGTACGACATCACCTTGGAGGCTGTTGAAGGAGGTCA
GAAGAAACTTTTTGAAGCTAAGGTCTGGGAGAAGCCTTGGATGCAATTCA
AGGAGTTGAAAGAATTCAATACTGTGGCTCAGTCTCACTCCTCAACCGCT
TAGCTTGTGGTGACTGAAGATGACATCTACGTGTAGCTTGCAATGGATCA
AACAAAGAGACAGTATCAATAAGAATGGAGCTATAACCATGTTCAGAATA
TAAAAATAGATGTAACCGGATTTATGAGTTTGGTTCTTTAATCTTTTGCA
AGTTATGTGTCGATTATTTATGGTAGTAGCTGCAACTCAGCGCAACTTTT
ATAACTGTGTGAAAAATAATTGAAATGACCTTTGGTCTGTAATATATATA
CAAGATTAATCTCTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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