DR403226

Overview
NameDR403226
Unique NameDR403226
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: SAR1_CANGA (Small COPII coat GTPase SAR1 OS=Candida glabrata GN=SAR1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.729e-22
Identity = 62/169 (36.69%), Postives = 86/169 (50.89%), Query Frame = 3
Query:  156 KEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR-------QRHWYIQSTCATSGEGLYEGLDWLSNNV 641
            K  ++L + LD AGKTT+L+ LK   + T  PT     E +   NI FT +D+GG  + R LW+ YF    G++F+VDS D DR  EAR EL  + N  EL+D   ++  NK D  NA++ AE+   LGL +         QR   +         G  E   WLS  +
Sbjct:   21 KHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHVQARRLWKDYFPEVNGIVFLVDSADPDRFDEARVELDALFNITELKDVPFVILGNKIDAANAVSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWLSQYI 189          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: SAR1_MAGGR (Small COPII coat GTPase SAR1 OS=Magnaporthe grisea GN=SAR1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.564e-22
Identity = 59/173 (34.10%), Postives = 91/173 (52.60%), Query Frame = 3
Query:  156 KEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH-----------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNV 641
            K  ++L + LD AGKTT+L+ LK   +    PT+    E +   N+ FT +D+GG  + R LW+ YF    G++F+VD+ D DR  EA+ EL  +L+ +EL     ++  NK D P A++  E+  +LGL+            +R    ++ S     G G  EG+ WLS  V
Sbjct:   19 KHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHDRFPEAKAELDALLSMEELAKVPFVILGNKIDHPEAISEEELRHQLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYG--EGIRWLSQYV 189          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: SAR1B_DICDI (GTP-binding protein Sar1B OS=Dictyostelium discoideum GN=sarB PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.940e-22
Identity = 56/169 (33.14%), Postives = 100/169 (59.17%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLI-FVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITD-------KLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 629
            F KKE +I+++ L  AGKTT+L+ L  G + + IPT+  N E+  Y N++F  +D+GGQ  +R LW+ Y  +++ +I F+VDS+D + I+E++ E+H +L ++ L  + LL+  +K D     N   + D       +LGL++     + +  T + +  G+ + L+WL
Sbjct:   16 FFKKEAKIVIIGLGNAGKTTLLHLLVTGSLKSHIPTLRPNAESFTYGNVNFKAYDLGGQQNLRFLWKQYVPDSKTIIVFMVDSSDYNSIIESKSEIHDILGDEHLSQSPLLILGSKCDAKGHHNRENLIDLLDIRRFELGLNNSNNVPFDLIMTSSITRYGITDMLNWL 184          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: SAR1_TRIRE (Small COPII coat GTPase sar1 OS=Trichoderma reesei GN=sar1 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.037e-21
Identity = 57/173 (32.95%), Postives = 93/173 (53.76%), Query Frame = 3
Query:  156 KEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH-----------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNV 641
            K  ++L + LD AGKTT+L+ LK   +    PT+    E +   N+ F  +D+GG  + R +WR YF +  G++F+VD+ D +R  EA+ EL  +L+ +EL     ++  NK D P+A++  E+  +LGL+            +R    ++ S     G G  +G+ WLSN V
Sbjct:   19 KHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELAIGNVRFNTFDLGGHQQARRIWRDYFPDVNGVVFLVDAKDHERFPEAKAELDALLSMEELSKVPFVILGNKIDHPDAVSEDELRHQLGLYQTTGKGRVQLEGIRPIELFMCSVVMRQGYG--DGIRWLSNYV 189          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: SAR1_PICST (Small COPII coat GTPase SAR1 OS=Pichia stipitis GN=SAR1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21
Identity = 58/174 (33.33%), Postives = 89/174 (51.15%), Query Frame = 3
Query:  156 KEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL------------RQRHWYIQSTCATSGEGLYEGLDWLSNNV 641
            K  ++L + LD AGKTT+L+ LK   + T  PT+    E +   ++ FT +D+GG  + R LW+ YF    G++F+VD+ D +R  E++ EL  +   +EL     L+  NK D+P A+   E+   LGL++             R    Y+ S    SG G  EG  WLS  +
Sbjct:   19 KHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELSHVPFLILGNKIDVPTAVGEMELKSALGLYNTTGKDTGKLPEGSRPIEVYMVSVVMRSGYG--EGFKWLSQYI 190          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: AR13B_DANRE (ADP-ribosylation factor-like protein 13B OS=Danio rerio GN=arl13b PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.769e-21
Identity = 58/172 (33.72%), Postives = 94/172 (54.65%), Query Frame = 3
Query:  156 KEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRH---WYIQSTCATSGEG------LYEGLDWLSNNVA 644
            +++ ++MV LD AGKT  +  ++    +   PT+GF+   ++      T++D+GG  +IR +W++Y+  + G++FVVDS+D  RI E RD +  +L    +    +LV ANKQD   AM  A+I + L L  L   +     I+   A  G G      +  GL+WL NN+A
Sbjct:   20 RKVTLVMVGLDNAGKTATVRGIQGESPLDVAPTVGFSKVDLKQGKFEVTIFDLGGGKRIRGIWKNYYSESYGVVFVVDSSDVQRIQETRDTMAEVLRHPRIAGKPVLVLANKQDQDGAMAEADIIETLSLEKLVNENKCLCQIEPCSAVLGYGKKVDKSIKNGLNWLLNNIA 191          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: SAR1_PHANO (Small COPII coat GTPase SAR1 OS=Phaeosphaeria nodorum GN=SAR1 PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.310e-21
Identity = 57/173 (32.95%), Postives = 92/173 (53.18%), Query Frame = 3
Query:  156 KEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH-----------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNV 641
            K  ++L + LD AGKTT+L+ LK   +    PT+    E +   N+ FT +D+GG  + R LWR YF    G++F+VD+ D +R+ E++ EL  +L  +EL++   ++  NK D P A++  ++   LGL+            +R    ++ S     G G  EG+ WLS  V
Sbjct:   15 KHAKLLFLGLDNAGKTTLLHMLKNDRVAVLQPTLHPTSEELSIGNVKFTTFDLGGHAQARRLWRDYFPEVSGIVFLVDAKDHERLNESKAELDALLAMEELKNTPFVILGNKIDHPEAVSEDQLRATLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYG--EGIRWLSQYV 185          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARFRP_BOVIN (ADP-ribosylation factor-related protein 1 OS=Bos taurus GN=ARFRP1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.310e-21
Identity = 56/174 (32.18%), Postives = 94/174 (54.02%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTIL----------YK-LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLG--LHSLRQRHWYIQSTCATSGEGLYEGLDWL 629
            F K E  +L++ LD AGKTT L          YK + L +I TT+   G N+ TV+        WD+GGQ++++ LW  Y+    G+I+V+DS D +R+ E++    +M+  + L    +LV ANKQD+   ++  +I          + +R    Q+  A +G+G+ EG++W+
Sbjct:   13 FQKDEYCVLILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTV---GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKQAFEKMVTSEALDGVPILVLANKQDVETCLSIPDIKTAFSDCASKIGRRDCLTQACSALTGKGVREGIEWM 183          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARFRP_RAT (ADP-ribosylation factor-related protein 1 OS=Rattus norvegicus GN=Arfrp1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.017e-21
Identity = 59/179 (32.96%), Postives = 99/179 (55.31%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTIL----------YK-LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEI-------TDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 629
            F K E  IL++ LD AGKTT L          YK + L +I TT+   G N+ TV+        WD+GGQ++++ LW  Y+    G+I+V+DS D +R+ E+++   ++++ + L    +LV ANKQD+   ++  +I       T K+G     +R    Q+  A +G+G+ EG++W+
Sbjct:   13 FQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTV---GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKEAFEKVVSSEALDGVPILVLANKQDVETCLSIPDIKTAFSDCTCKIG-----RRDCLTQACSALTGKGVREGIEWM 183          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARFRP_PONAB (ADP-ribosylation factor-related protein 1 OS=Pongo abelii GN=ARFRP1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.017e-21
Identity = 59/179 (32.96%), Postives = 97/179 (54.19%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTIL----------YK-LKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEI-------TDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 629
            F K E  IL++ LD AGKTT L          YK + L +I TT+   G N+ TV+        WD+GGQ++++ LW  Y+    G+I+V+DS D +R+ E++    +++  + L    +LV ANKQD+   ++  +I       T K+G     +R    Q+  A +G+G+ EG++W+
Sbjct:   13 FQKDEYCILILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTV---GLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLAESKQAFEKVVTSEALCGVPVLVLANKQDVETCLSIPDIKTAFSDCTSKIG-----RRDCLTQACSALTGKGVREGIEWM 183          
The following BLAST results are available for this feature:
BLAST of DR403226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
SAR1_CANGA2.729e-2236.69Small COPII coat GTPase SAR1 OS=Candida glabrata G... [more]
SAR1_MAGGR3.564e-2234.10Small COPII coat GTPase SAR1 OS=Magnaporthe grisea... [more]
SAR1B_DICDI7.940e-2233.14GTP-binding protein Sar1B OS=Dictyostelium discoid... [more]
SAR1_TRIRE1.037e-2132.95Small COPII coat GTPase sar1 OS=Trichoderma reesei... [more]
SAR1_PICST1.354e-2133.33Small COPII coat GTPase SAR1 OS=Pichia stipitis GN... [more]
AR13B_DANRE1.769e-2133.72ADP-ribosylation factor-like protein 13B OS=Danio ... [more]
SAR1_PHANO2.310e-2132.95Small COPII coat GTPase SAR1 OS=Phaeosphaeria nodo... [more]
ARFRP_BOVIN2.310e-2132.18ADP-ribosylation factor-related protein 1 OS=Bos t... [more]
ARFRP_RAT3.017e-2132.96ADP-ribosylation factor-related protein 1 OS=Rattu... [more]
ARFRP_PONAB3.017e-2132.96ADP-ribosylation factor-related protein 1 OS=Pongo... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244E02 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403226 ID=DR403226; Name=DR403226; organism=Citrus sinensis; type=EST; length=694bp
GGGGATATACATATTTCTGCGTTGTTGTTAAGCTAATAAGCTTCGTCCTC
CACACCCCCCCCCCCTCCCCTCTCTCTCGCGTTCTCTGAAGTGATCCCCA
GCTGGAAGAATGGGGCTGACTTTCACAAAGCTGTTCAGCCGGCTCGTTTG
CCAAGAAAGAGATGCGAATTCTAATGGTTNNTCTTGATGCTGCTGGTAAG
ACCACTATCTTGTACAAGCTCAAGCTTGGAGAGATTGTCACCACAATTCC
TACCATTGGGTTTAATGTGGAGACCGTTGAATATAAAAACATCAGTTTCA
CTGTGTGGGATGTTGGTGGCCAGGACAAGATTCGTCCCTTGTGGAGGCAT
TATTTCCAGAACACTCAAGGTCTCATTTTTGTTGTGGACAGCAATGACAG
AGACCGTATTGTAGAAGCAAGGGATGAATTGCATAGGATGTTGAATGAGG
ATGAGCTGCGAGATGCAGTGTTGCTTGTATTTGCTAACAAACAGGATCTT
CCAAATGCAATGAATGCTGCTGAGATTACTGATAAGCTTGGCCTCCACTC
CCTCAGGCAGCGCCACTGGTACATCCAGAGCACCTGTGCAACCTCTGGTG
AGGGTCTTTATGAAGGTCTGGATTGGCTCTCCAACAACGTCGCTAACAAG
GCCTGAAGCTGTTAAGATCTTTTTGCGGACTGGCAATTCTGGAT
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