DR403226

Overview
NameDR403226
Unique NameDR403226
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13665 contig Csv1_Contig13665:1..669. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF3_HUMAN (ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 PE=1 SV=2)

HSP 1 Score: 309.301 bits (791), Expect = 1.244e-83
Identity = 151/166 (90.96%), Postives = 159/166 (95.78%), Query Frame = 3
Query:  153 KKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNVANK 650
            KKEMRILMV LDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF3_BOVIN (ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE=2 SV=3)

HSP 1 Score: 309.301 bits (791), Expect = 1.244e-83
Identity = 151/166 (90.96%), Postives = 159/166 (95.78%), Query Frame = 3
Query:  153 KKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNVANK 650
            KKEMRILMV LDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ EAR+EL RML EDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWL+N + NK
Sbjct:   15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK 180          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF12_CAEEL (ADP-ribosylation factor 1-like 2 OS=Caenorhabditis elegans GN=arf-1.2 PE=1 SV=2)

HSP 1 Score: 308.916 bits (790), Expect = 1.625e-83
Identity = 150/171 (87.72%), Postives = 160/171 (93.57%), Query Frame = 3
Query:  141 GSFAKKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNVANKA 653
            G F K+EMRILMV LDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+R+ EAR+EL RML EDELRDAVLLVFANKQDLP AMNAAE+TDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWLSN + N++
Sbjct:   11 GLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRMLAEDELRDAVLLVFANKQDLPQAMNAAEVTDKLGLHSLRNRSWYIQATCATSGDGLYEGLDWLSNQLKNRS 181          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF1_SCHPO (ADP-ribosylation factor 1 OS=Schizosaccharomyces pombe GN=arf1 PE=2 SV=2)

HSP 1 Score: 307.76 bits (787), Expect = 3.620e-83
Identity = 148/168 (88.10%), Postives = 159/168 (94.64%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNVANK 650
            F K+EMRILMV LDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY+NISFTVWDVGGQDKIRPLWRHYFQNTQG+IFVVDSNDR+RI EA +EL RMLNEDELRDA+LLVFANKQDLPNAMNAAEITDKLGLHSLR R WYIQ+TCATSG+GLYEGL+WLS N+ N+
Sbjct:   13 FGKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSLRHRQWYIQATCATSGDGLYEGLEWLSTNLKNQ 180          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF1_DICDI (ADP-ribosylation factor 1 OS=Dictyostelium discoideum GN=arfA PE=1 SV=3)

HSP 1 Score: 299.671 bits (766), Expect = 9.859e-81
Identity = 145/169 (85.80%), Postives = 156/169 (92.31%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNVANKA 653
            F KK+MRILMV LDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE+KNI+FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RI EA DEL +MLNEDELRDAVLLVF NKQDLPNAM+ AE+TDKL LHSLR R WYIQSTCATSG+GLYEGLDWLSN + + +
Sbjct:   13 FGKKDMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEFKNINFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEACDELTKMLNEDELRDAVLLVFCNKQDLPNAMSVAEVTDKLNLHSLRSRKWYIQSTCATSGDGLYEGLDWLSNTLTSSS 181          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF_ASHGO (ADP-ribosylation factor OS=Ashbya gossypii GN=ARF1 PE=3 SV=3)

HSP 1 Score: 297.745 bits (761), Expect = 3.746e-80
Identity = 142/169 (84.02%), Postives = 157/169 (92.90%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNVANKA 653
            F  KEMRILMV LD AGKTT+LYKLKLGE+VTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYF+NT+G+IFVVDSNDR RI EAR+ L RMLNEDE+R+AVLLVFANKQDLP AM+AAEIT+KLGLHS+RQR WYIQ+TCATSGEGLYEGL+WLS N+ N+A
Sbjct:   13 FGHKEMRILMVGLDGAGKTTVLYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFRNTEGIIFVVDSNDRSRIAEAREVLQRMLNEDEIRNAVLLVFANKQDLPEAMSAAEITEKLGLHSIRQRPWYIQATCATSGEGLYEGLEWLSTNLKNQA 181          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF2_DROME (ADP-ribosylation factor 2 OS=Drosophila melanogaster GN=Arf102F PE=1 SV=2)

HSP 1 Score: 295.049 bits (754), Expect = 2.428e-79
Identity = 145/168 (86.31%), Postives = 150/168 (89.29%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNVANK 650
            F KK+MRILMV LDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRI EA  EL  ML EDELRDAVLLVFANKQDLPNAM AAE+TDKL L+ LR RHW+IQSTCAT G GLYEGLDWLS  +A K
Sbjct:   13 FGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAMTAAELTDKLRLNQLRNRHWFIQSTCATQGHGLYEGLDWLSAELAKK 180          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF_AJECA (ADP-ribosylation factor OS=Ajellomyces capsulata GN=ARF PE=1 SV=3)

HSP 1 Score: 294.664 bits (753), Expect = 3.172e-79
Identity = 142/163 (87.12%), Postives = 154/163 (94.48%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSN 635
            + KKEMRILMV LDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQNTQG+IFVVDSNDRDR+VEAR+EL RMLNEDELRDA+LLVFANKQDLPNAM+ AEIT +LGL SL +R WYIQSTCAT+G+GLYEGL+WL+N
Sbjct:   13 WGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSPAEITQQLGLQSLTRRAWYIQSTCATTGDGLYEGLEWLAN 175          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF_CANAL (ADP-ribosylation factor OS=Candida albicans GN=ARF1 PE=3 SV=4)

HSP 1 Score: 292.352 bits (747), Expect = 1.574e-78
Identity = 141/168 (83.93%), Postives = 155/168 (92.26%), Query Frame = 3
Query:  138 AGSFAKKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNV 641
            A    ++EMRILMV LDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWR+YFQNTQG+IFVVDSNDRDRI EAR+EL  MLNEDEL+DAVLLV ANKQDLPNAMNAAEIT+K+GLHS+  R W+IQ+TCAT+G+GLYEGL+WLSN V
Sbjct:   10 ASLLGRREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRYYFQNTQGIIFVVDSNDRDRINEAREELQSMLNEDELKDAVLLVLANKQDLPNAMNAAEITEKMGLHSIMNRPWFIQATCATTGDGLYEGLEWLSNQV 177          
BLAST of DR403226 vs. ExPASy Swiss-Prot
Match: ARF4_BOVIN (ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE=2 SV=3)

HSP 1 Score: 288.5 bits (737), Expect = 2.273e-77
Identity = 139/168 (82.74%), Postives = 151/168 (89.88%), Query Frame = 3
Query:  147 FAKKEMRILMVXLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNVANK 650
            F KK+MRILMV LDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RI E  +EL +ML EDELRDAVLL+FANKQDLPNAM  +E+TDKLGL SLR R WY+Q+TCAT G GLYEGLDWLSN ++ +
Sbjct:   13 FGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAEELQKMLQEDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSKR 180          
The following BLAST results are available for this feature:
BLAST of DR403226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARF3_HUMAN1.244e-8390.96ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 ... [more]
ARF3_BOVIN1.244e-8390.96ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE... [more]
ARF12_CAEEL1.625e-8387.72ADP-ribosylation factor 1-like 2 OS=Caenorhabditis... [more]
ARF1_SCHPO3.620e-8388.10ADP-ribosylation factor 1 OS=Schizosaccharomyces p... [more]
ARF1_DICDI9.859e-8185.80ADP-ribosylation factor 1 OS=Dictyostelium discoid... [more]
ARF_ASHGO3.746e-8084.02ADP-ribosylation factor OS=Ashbya gossypii GN=ARF1... [more]
ARF2_DROME2.428e-7986.31ADP-ribosylation factor 2 OS=Drosophila melanogast... [more]
ARF_AJECA3.172e-7987.12ADP-ribosylation factor OS=Ajellomyces capsulata G... [more]
ARF_CANAL1.574e-7883.93ADP-ribosylation factor OS=Candida albicans GN=ARF... [more]
ARF4_BOVIN2.273e-7782.74ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244E02 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403226 ID=DR403226; Name=DR403226; organism=Citrus sinensis; type=EST; length=694bp
GGGGATATACATATTTCTGCGTTGTTGTTAAGCTAATAAGCTTCGTCCTC
CACACCCCCCCCCCCTCCCCTCTCTCTCGCGTTCTCTGAAGTGATCCCCA
GCTGGAAGAATGGGGCTGACTTTCACAAAGCTGTTCAGCCGGCTCGTTTG
CCAAGAAAGAGATGCGAATTCTAATGGTTNNTCTTGATGCTGCTGGTAAG
ACCACTATCTTGTACAAGCTCAAGCTTGGAGAGATTGTCACCACAATTCC
TACCATTGGGTTTAATGTGGAGACCGTTGAATATAAAAACATCAGTTTCA
CTGTGTGGGATGTTGGTGGCCAGGACAAGATTCGTCCCTTGTGGAGGCAT
TATTTCCAGAACACTCAAGGTCTCATTTTTGTTGTGGACAGCAATGACAG
AGACCGTATTGTAGAAGCAAGGGATGAATTGCATAGGATGTTGAATGAGG
ATGAGCTGCGAGATGCAGTGTTGCTTGTATTTGCTAACAAACAGGATCTT
CCAAATGCAATGAATGCTGCTGAGATTACTGATAAGCTTGGCCTCCACTC
CCTCAGGCAGCGCCACTGGTACATCCAGAGCACCTGTGCAACCTCTGGTG
AGGGTCTTTATGAAGGTCTGGATTGGCTCTCCAACAACGTCGCTAACAAG
GCCTGAAGCTGTTAAGATCTTTTTGCGGACTGGCAATTCTGGAT
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