DR403198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDHC_YEAST (Malate dehydrogenase, cytoplasmic OS=Saccharomyces cerevisiae GN=MDH2 PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 1.243e-23 Identity = 62/120 (51.67%), Postives = 78/120 (65.00%), Query Frame = 1 Query: 214 KVAVLGAAGGIGQPLAMLMKI---------NPLVSVLHL--YDVVNTP--GVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC 534 K+A+LGAAGGIGQ L++L+K N V+ +HL YDV GVTAD+SH+DT V +E+ L IV+IPAGVPRKPGMTRDDLFN+NAGI+ L + IA+CC Sbjct: 15 KIAILGAAGGIGQSLSLLLKAQLQYQLKESNRSVTHIHLALYDVNQEAINGVTADLSHIDTPISVSSHSPAGGIENCLHNASIVVIPAGVPRKPGMTRDDLFNVNAGIISQLGDSIAECC 134
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_SALMU (Malate dehydrogenase (Fragment) OS=Salmonella muenchen GN=mdh PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.052e-22 Identity = 59/107 (55.14%), Postives = 73/107 (68.22%), Query Frame = 1 Query: 244 IGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 IGQ LA+L+K P S L LYD+ TPGV D+SH+ T ++GF G+ + AL G D+V+I AGV RKPGM R DLFN+NAGIVK L + IAK CPKA V +I Sbjct: 1 IGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGED-VTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTCPKACVGII 106
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_KLEVA (Malate dehydrogenase (Fragment) OS=Klebsiella variicola GN=mdh PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.404e-19 Identity = 47/87 (54.02%), Postives = 61/87 (70.11%), Query Frame = 1 Query: 301 LYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 LYD+ TPGV D+SH+ T+ ++GF G+ AL G D+V+I AGV RKPGM R DLFN+NAGIVK L + IAK CP+A + +I Sbjct: 2 LYDIAPVTPGVAVDLSHIPTDVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTCPQACIGVI 87
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_KLEOX (Malate dehydrogenase (Fragment) OS=Klebsiella oxytoca GN=mdh PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.572e-18 Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 319 TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 TPGV D+SH+ T+ ++GF G+ AL G D+V+I AGV RKPGM R DLFN+NAGIVK L + IAK CP+A V +I Sbjct: 4 TPGVAVDLSHIPTDVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTCPQACVGII 82
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_KLEPR (Malate dehydrogenase (Fragment) OS=Klebsiella pneumoniae subsp. rhinoscleromatis GN=mdh PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.019e-17 Identity = 46/87 (52.87%), Postives = 60/87 (68.97%), Query Frame = 1 Query: 301 LYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 LYD+ TPGV D+SH+ T+ ++GF G+ AL G D+V+I AGV RKPGM R DLFN+NAGIVK L + IAK P+A + +I Sbjct: 2 LYDIAPVTPGVAVDLSHIPTDVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTRPQACIGII 87
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_KLETE (Malate dehydrogenase (Fragment) OS=Klebsiella terrigena GN=mdh PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.965e-17 Identity = 43/80 (53.75%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 319 TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 TPGV D+SH+ T+ ++GF G+ AL G D+V+I AGV RKPGM R DLFN+NAGIVK L + IAK P+A + +I Sbjct: 6 TPGVAVDLSHIPTDVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTSPQACIGII 84
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH2_ANADE (Malate dehydrogenase 2 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=mdh2 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.751e-12 Identity = 51/121 (42.15%), Postives = 70/121 (57.85%), Query Frame = 1 Query: 214 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGF----LGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 K+A++G G IG LA L + L V+ L+D+V G T DI+ A V GF G ED + G D+VI+ AG+PRKPGM+RDDL +N+ I+ T+ EGI + P A V +I Sbjct: 5 KIALIGG-GQIGGVLAQLAALRELGDVV-LFDIVEGLPQGKTLDIAEA---APVDGFDVSLKGTNTYED-IKGADVVIVTAGLPRKPGMSRDDLIAVNSKIMTTVAEGIKQYAPNAFVIVI 119
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_RHOCS (Malate dehydrogenase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=mdh PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.398e-12 Identity = 50/120 (41.67%), Postives = 66/120 (55.00%), Query Frame = 1 Query: 214 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA----DISHMD-TNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 K+A++GA G IG LA+L L ++ L D+ + GV DI+ G+ G D L G D+VI+ AGVPRKPGM+RDDL INA I+K + EGI P A V +I Sbjct: 5 KIALVGA-GQIGGTLALLAGQKELGDIV-LLDIPDAEGVAKGKALDIAEASPVEGFDAGYTGTSNYAD-LAGADVVIVTAGVPRKPGMSRDDLVGINARIIKAVGEGIRTHAPDAFVIVI 121
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_PELUB (Malate dehydrogenase OS=Pelagibacter ubique GN=mdh PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.091e-11 Identity = 46/115 (40.00%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 214 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-NAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIV 549 K++++GA G IG LA L+ + + L+DV + G DI+ + + F G ED + D++II AGVPRKPGM+RDDL IN I+K + EGI K P A V Sbjct: 3 KISLIGA-GQIGGTLAHLIGTKEVADEVVLFDVASGIAKGKALDIAQSSSVDGFNVKFSGTDNYED-IKDSDVIIITAGVPRKPGMSRDDLLGINLKIIKQVAEGIKKNAPNAFV 115
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_FLAJ1 (Malate dehydrogenase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=mdh PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.091e-11 Identity = 44/121 (36.36%), Postives = 64/121 (52.89%), Query Frame = 1 Query: 214 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGF----LGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 KV ++GA G +G A ++ + S + L D+ G DI+ TN GF G G D+V+I +G+PRKPGMTR++L INAGIVKT+ E + K P I+ ++ Sbjct: 2 KVTIVGA-GNVGATCADVISYRGIASEVVLLDIKEGFAEGKALDITQCATNT---GFNTKVSGVTNDYSKTAGSDVVVITSGIPRKPGMTREELIGINAGIVKTVAENVLKYSPNTIIVVV 118 The following BLAST results are available for this feature:
BLAST of DR403198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 178
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403198 ID=DR403198; Name=DR403198; organism=Citrus sinensis; type=EST; length=559bpback to top |