DR403198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_RHOS5 (Malate dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=mdh PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.074e-11 Identity = 45/114 (39.47%), Postives = 63/114 (55.26%), Query Frame = 1 Query: 214 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TP-GVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIV 549 K+A++GA G IG LA L I L V+ L+D+ TP G DI+ + + + + G D+ I+ AGVPRKPGM+RDDL IN ++K++ EGI P A V Sbjct: 5 KIALIGA-GQIGGTLAHLAAIKELGDVV-LFDIAEGTPQGKALDIAQSGPSEGFDAVMKGANSYEDIAGADVCIVTAGVPRKPGMSRDDLIGINLKVMKSVGEGIKAHAPNAFV 116
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_PARL1 (Malate dehydrogenase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=mdh PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.074e-11 Identity = 43/114 (37.72%), Postives = 61/114 (53.51%), Query Frame = 1 Query: 214 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIV 549 K+A++G G IG LA+L + L V+ ++D+ G D++ L + G D+VI+ AGVPRKPGM+RDDL IN ++K + EGIAK P A V Sbjct: 5 KIALIGG-GQIGGTLALLAGLKELGDVV-IFDIAEGLPQGKALDLAQTGPVEGYNTALSGANDYKGIKGADVVIVTAGVPRKPGMSRDDLLGINLKVMKQVGEGIAKYAPNAFV 116
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_ROSDO (Malate dehydrogenase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=mdh PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.239e-11 Identity = 44/114 (38.60%), Postives = 62/114 (54.39%), Query Frame = 1 Query: 214 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIV 549 K+A++GA G IG LA L + L V+ L+D+ G DI+ +A + Q + G D+ I+ AGV RKPGM+RDDL IN ++K++ EGIA P A V Sbjct: 5 KIALIGA-GQIGGTLAHLAALKELGDVV-LFDIAEGIPEGKALDIAESGPSAKFDARMSGTQSYADIAGADVCIVTAGVARKPGMSRDDLLGINLKVMKSVGEGIAAHAPNAFV 116
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_GEOSM (Malate dehydrogenase OS=Geobacter sp. (strain M21) GN=mdh PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.239e-11 Identity = 47/121 (38.84%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 214 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGF----LGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 K+A++G G IG LA L + L V+ ++D+V G DI+ + + V GF G ED + G D+VI+ AG+PRKPGM+RDDL +N+ I+ ++ EGI P A V +I Sbjct: 5 KIALIGG-GQIGGVLAQLAALRELGDVV-MFDIVEGLPQGKMLDIAEVGS---VDGFDCNLKGTNSYED-IKGSDVVIVTAGLPRKPGMSRDDLIEVNSKIMTSVAEGIKANAPNAFVIVI 119
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_GEOSL (Malate dehydrogenase OS=Geobacter sulfurreducens GN=mdh PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.239e-11 Identity = 47/121 (38.84%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 214 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGF----LGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 K+A++G G IG LA L + L V+ L+D+V G DI+ V GF G ED + G D+VI+ AG+PRKPGM+RDDL +N+ I+ ++ EGI + P + V +I Sbjct: 5 KIALIGG-GQIGGVLAQLCALRELGDVV-LFDIVEGLPQGKCLDIAEASP---VDGFDVCLKGTNSYED-IAGADVVIVTAGLPRKPGMSRDDLIEVNSKIMTSVAEGIKQYAPNSFVIVI 119
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_GEOBB (Malate dehydrogenase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=mdh PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.239e-11 Identity = 47/121 (38.84%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 214 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGF----LGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 K+A++G G IG LA L + L V+ ++D+V G DI+ + + V GF G ED + G D+VI+ AG+PRKPGM+RDDL +N+ I+ ++ EGI P A V +I Sbjct: 5 KIALIGG-GQIGGVLAQLAALRELGDVV-MFDIVEGLPQGKMLDIAEVGS---VDGFDCNLKGTNSYED-IKGADVVIVTAGLPRKPGMSRDDLIEVNSKIMTSVAEGIKANAPNAFVIVI 119
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_FRATN (Malate dehydrogenase OS=Francisella tularensis subsp. novicida (strain U112) GN=mdh PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.239e-11 Identity = 46/118 (38.98%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 214 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAV------VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIV 549 K+A++GA G IG LA L + L V+ L+D+ + + T + VRG + LE++ D+VI+ AGVPRKPGM+RDDL IN +++T+ EGI CP A V Sbjct: 5 KIALVGA-GNIGGTLAHLALLKQLGDVV-LFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENS----DVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFV 116
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_FRANO (Malate dehydrogenase OS=Francisella novicida GN=mdh PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.239e-11 Identity = 46/118 (38.98%), Postives = 66/118 (55.93%), Query Frame = 1 Query: 214 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAV------VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIV 549 K+A++GA G IG LA L + L V+ L+D+ + + T + VRG + LE++ D+VI+ AGVPRKPGM+RDDL IN +++T+ EGI CP A V Sbjct: 5 KIALVGA-GNIGGTLAHLALLKQLGDVV-LFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENS----DVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFV 116 The following BLAST results are available for this feature:
BLAST of DR403198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 178
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403198 ID=DR403198; Name=DR403198; organism=Citrus sinensis; type=EST; length=559bpback to top |