DR403198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDHM_RAT (Malate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Mdh2 PE=1 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 4.400e-37 Identity = 74/115 (64.35%), Postives = 94/115 (81.74%), Query Frame = 1 Query: 214 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 KVAVLGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG +QL D L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL A+ CP+A++ +I Sbjct: 26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRANVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICII 140
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDHM_CAEEL (Probable malate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=mdh-1 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 9.803e-37 Identity = 80/140 (57.14%), Postives = 101/140 (72.14%), Query Frame = 1 Query: 139 TLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 TL +SGL + R +P KVA+LGAAGGIGQPL +L+K +PLV+ L LYDVVNTPGV AD+SH+D+NA V G ++L A+ D+++IPAGVPRKPGMTRDDLFN NAGIV+ L IAK PKA++ +I Sbjct: 7 TLVQAAANSGLRAVSVRHSSQAP--KVALLGAAGGIGQPLGLLLKQDPLVAHLALYDVVNTPGVAADLSHIDSNAKVTAHTGPKELYAAVENADVIVIPAGVPRKPGMTRDDLFNTNAGIVRDLAAVIAKASPKALIAII 144
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDHM_MACFA (Malate dehydrogenase, mitochondrial OS=Macaca fascicularis GN=MDH2 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.280e-36 Identity = 74/115 (64.35%), Postives = 94/115 (81.74%), Query Frame = 1 Query: 214 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 KVAVLGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T AVV+G+LG +QL D L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL A+ P+A++ +I Sbjct: 26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAVVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLAAACAQHRPEAMICII 140
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDHM_CHLRE (Malate dehydrogenase, mitochondrial OS=Chlamydomonas reinhardtii PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.184e-36 Identity = 77/123 (62.60%), Postives = 93/123 (75.61%), Query Frame = 1 Query: 190 AKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 A G KVAVLGAAGGIGQPL+MLMK+N VS L LYD+ TPGV AD+SH++T A V+GF + L +AL G D+VIIPAGVPRKPGMTRDDLF INAGIV+ L + + CP A++N+I Sbjct: 56 APSSGKGRKVAVLGAAGGIGQPLSMLMKMNSQVSSLSLYDIAGTPGVAADVSHINTKAQVKGF-DKDGLAEALRGCDLVIIPAGVPRKPGMTRDDLFKINAGIVRDLVTAVGQHCPGAVLNII 177
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_COLP3 (Malate dehydrogenase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=mdh PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 8.038e-31 Identity = 72/117 (61.54%), Postives = 85/117 (72.65%), Query Frame = 1 Query: 214 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT-PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 KVAVLGAAGGIGQ L++L+K P S L LYDV PGV D+SH+ T+ V GF G+ L ALTG DIV+IPAG+PRKPGM R DLFN+NAGI+K L EGI CPKA+V +I Sbjct: 2 KVAVLGAAGGIGQALSLLLKTQLPAGSELSLYDVAPVVPGVAVDLSHIPTDVKVAGF-GRDDLNGALTGADIVLIPAGMPRKPGMDRADLFNVNAGIIKVLAEGIVASCPKALVGVI 117
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDHM_SCHPO (Malate dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=MDH1 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 5.210e-30 Identity = 68/115 (59.13%), Postives = 82/115 (71.30%), Query Frame = 1 Query: 202 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQ-LEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKA 543 S FKVAVLGA GGIGQPL+ML+K+N VS L L+D+ PGV ADI H++T + V G+ + LE AL G D+VIIPAGVPRKPGMTRDDLF NA IV+ L + CP+A Sbjct: 26 SRAFKVAVLGAGGGIGQPLSMLLKLNDKVSELALFDIRGAPGVAADIGHINTTSNVVGYAPDDKGLEKALNGADVVIIPAGVPRKPGMTRDDLFATNASIVRDLAFAAGETCPEA 140
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDHM_SCHMA (Malate dehydrogenase, mitochondrial (Fragment) OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 5.210e-30 Identity = 62/109 (56.88%), Postives = 83/109 (76.15%), Query Frame = 1 Query: 232 AAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 A+GGIG+PL++L+K +PL+S L LYD+ + GV AD+SH++T A V LG +L + LTG ++VIIPAG+PRKPGMTRDDLFN NA IV L + AK CPKA++ +I Sbjct: 1 ASGGIGEPLSLLLKQSPLISQLALYDIAHVKGVAADLSHIETQAHVTAHLGPGELAECLTGANVVIIPAGLPRKPGMTRDDLFNTNASIVAELIDSCAKNCPKAMICII 109
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_PSEHT (Malate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=mdh PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.161e-29 Identity = 71/117 (60.68%), Postives = 83/117 (70.94%), Query Frame = 1 Query: 214 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT-PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 KVAVLGAAGGIGQ L++L+K P S L LYDV PGV D+SH+ T V GF G L +AL DIV+IPAG+PRKPGM R DLFN+NAGI+KTL EGI CPKA+V +I Sbjct: 2 KVAVLGAAGGIGQALSLLLKTGLPAGSELSLYDVAPVVPGVAVDLSHIPTAVKVAGF-GADALNEALKDADIVLIPAGMPRKPGMDRADLFNVNAGIIKTLAEGIVASCPKALVGII 117
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_ALTMD (Malate dehydrogenase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=mdh PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.161e-29 Identity = 72/117 (61.54%), Postives = 83/117 (70.94%), Query Frame = 1 Query: 214 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT-PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 KVAVLGAAGGIGQ L++L+K P S L LYDV PGV D+SH+ T V G G+ L DALTG D+V+IPAG+PRKPGM R DLFNINAGIVK L EG+A CP A V +I Sbjct: 2 KVAVLGAAGGIGQALSLLLKTQLPAGSDLALYDVAPVVPGVAVDLSHIPTAVKVTGH-GKDDLADALTGADVVLIPAGMPRKPGMDRSDLFNINAGIVKNLIEGVADNCPNACVGII 117
BLAST of DR403198 vs. ExPASy Swiss-Prot
Match: MDH_IDILO (Malate dehydrogenase OS=Idiomarina loihiensis GN=mdh PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.516e-29 Identity = 71/117 (60.68%), Postives = 83/117 (70.94%), Query Frame = 1 Query: 214 KVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT-PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 558 KVAVLGAAGGIGQ L++L+K P S L LYDV PGV D+SH+ T+ V GF G+ L AL G DIV+IPAGVPRKPGM R DLFN+NAGIVK L +G+A CP A V +I Sbjct: 2 KVAVLGAAGGIGQALSLLLKTQLPAGSELSLYDVAPVVPGVAVDLSHIPTDVKVTGF-GKDDLASALVGSDIVLIPAGVPRKPGMDRSDLFNMNAGIVKNLVQGVADNCPNACVGII 117 The following BLAST results are available for this feature:
BLAST of DR403198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 178
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403198 ID=DR403198; Name=DR403198; organism=Citrus sinensis; type=EST; length=559bpback to top |