DN621644

Overview
NameDN621644
Unique NameDN621644
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:63..694. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.882e-16
Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 2
Query:  275 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQ-RHRLGAAQNCSATTKGNHKLTADVL--PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            FA F +++G++YES  E   R + F +NL L R           G+  F+D + EEF+ R+  GAA   +A  +    +  +V+  P   DWR  G V+ VKDQG CGSCW FS  G++E
Sbjct:   38 FAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVE 157          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.458e-16
Identity = 48/124 (38.71%), Postives = 67/124 (54.03%), Query Frame = 2
Query:  275 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG----LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTA---DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            +A +   +GK Y +V E + R+A F  NL  I   N        S+RLGLN+FAD + EE++   LG         K + +  A   + LPE+ DWR  G V+ +KDQG CGSCW FS   ++E
Sbjct:   40 YAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVE 163          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.458e-16
Identity = 53/135 (39.26%), Postives = 70/135 (51.85%), Query Frame = 2
Query:  245 VIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL--------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            V    ++  SF  + R   K Y   E M  R+  F KN+D + + N KG    LGLN+ AD S EE++ + LG   +      G HK    +         P   DWRE   V+PVKDQG CGSC++FSTTGS+E
Sbjct:   24 VFSHKQYQDSFIDWMRSNNKAYTHKEFMP-RYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLN--GYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVE 155          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.210e-16
Identity = 48/131 (36.64%), Postives = 70/131 (53.44%), Query Frame = 2
Query:  242 QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKG-NHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAA 631
            Q + + ++  +F  +   + + Y S EE   RF  F  N+D I   N KG    LGLN FAD + EE++   LG   + S+     + K+   V   + DWR  G V+P+K+QG CG CW+FS TG+ E A
Sbjct:   19 QQLSELQYRNAFTNWMIAHQRHYSS-EEFNGRFNIFKANMDYINEWNTKGSETVLGLNVFADITNEEYRATYLGTPFDASSLEMTPSEKVFGGVQANSVDWRAKGAVTPIKNQGECGGCWSFSATGATEGA 148          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 5.476e-16
Identity = 46/113 (40.71%), Postives = 66/113 (58.41%), Query Frame = 2
Query:  317 VEEMKLRFATFSKNLDLI--RSTNCKGLSYRLGLNKFADWSWEEFQRHRLGA----AQNCSATTKGNHKLTADV----LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            + +   RF  F  NL  I   + + K  +Y+LGL KF D + +E+++  LGA    A+  +     N K +A V    +PET DWR+ G V+P+KDQG CGSCW FSTT ++E
Sbjct:   67 INDQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVE 179          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CYSP7_DICDI (Cysteine proteinase 7 OS=Dictyostelium discoideum GN=cprG PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.476e-16
Identity = 47/130 (36.15%), Postives = 67/130 (51.54%), Query Frame = 2
Query:  242 QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAA 631
            Q + +  +  +F  +   + + Y S EE   R+  F  N+D +   N KG    LGLN FAD S EE++   LG   + S+          D   +  DWR  G V+P+K+QG CG CW+FSTTG+ E A
Sbjct:   19 QQLSEVEYRNAFTNWMIAHQRHYSS-EEFNGRYNIFKANMDYVNEWNTKGSETVLGLNVFADISNEEYRATYLGTPFDASSLEMTESDKIFDASAQV-DWRTQGAVTPIKNQGQCGGCWSFSTTGATEGA 146          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.593e-15
Identity = 56/141 (39.72%), Postives = 70/141 (49.65%), Query Frame = 2
Query:  227 ETSVLQVIGQARHALS--FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            + +VL + G A  A S  +  F  +YG+ Y   EE   R   F +N   I   N K     +++ L +NKF D + EEF     G     SA     +  K T     E  DWR  G V+PVKDQG CGSCW FSTTGSLE
Sbjct:    2 KVAVLFLCGVALAAASPSWEHFKGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAVMKGNIPRRSAPVSVFYPKKETGPQATEV-DWRTKGAVTPVKDQGQCGSCWAFSTTGSLE 141          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.593e-15
Identity = 49/114 (42.98%), Postives = 61/114 (53.51%), Query Frame = 2
Query:  299 GKIYESVEEMKLRFATFSKNLDLIRSTNCK-GLSYRLGLNKFADWSWEEFQRHRLGAA---QNCSATTKGNHKLTADVLPETKDWRESGIVSP-VKDQGHCGSCWTFSTTGSLE 625
            GK Y  + E + RF  F  NL  I   N     SY  GLNKF+D + +EFQ   LG     ++ S   +       DVLP+  DWRE G V P VK QG CGSCW F+ TG++E
Sbjct:   49 GKNYNGLGEKERRFKIFKDNLKRIEEHNSDPNRSYERGLNKFSDLTADEFQASYLGGKMEKKSLSDVAERYQYKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAFAATGAVE 162          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.593e-15
Identity = 45/114 (39.47%), Postives = 59/114 (51.75%), Query Frame = 2
Query:  293 RYGKIYESVEEMKLRFATFSKNLDLIRSTNCK-GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            +YGK Y S+ E + RF  F + L  I   N     SY++GLN+FAD + EEF+   LG     + T   N        VLP   DWR +G V  +K QG CG CW FS   ++E
Sbjct:   48 KYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKTKVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVE 161          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.081e-15
Identity = 49/128 (38.28%), Postives = 70/128 (54.69%), Query Frame = 2
Query:  275 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLS---YRLGLNKFADWSWEEFQRHRLGAAQNCSATTK-GNHKL-----TADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAA 631
            F  +   +G++Y + EE   R   F  N + IR  N    S   +RLGLNKFAD + +EF +  L A ++ S   K  N K+     + D  P + DWR+ G+++ VK QG CG  W FS TG++EAA
Sbjct:   44 FQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQEFSKKYLQAPKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAA 171          
The following BLAST results are available for this feature:
BLAST of DN621644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
CYSP_TRYCR1.882e-1638.33Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
ORYA_ORYSJ2.458e-1638.71Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
CYSP3_DICDI2.458e-1639.26Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CYSP6_DICDI3.210e-1636.64Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
GCP1_ARATH5.476e-1640.71Germination-specific cysteine protease 1 OS=Arabid... [more]
CYSP7_DICDI5.476e-1636.15Cysteine proteinase 7 OS=Dictyostelium discoideum ... [more]
CYSP2_HOMAM1.593e-1539.72Digestive cysteine proteinase 2 OS=Homarus america... [more]
CPR2_ARATH1.593e-1542.98Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
ACTN_ACTDE1.593e-1539.47Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
P34_SOYBN2.081e-1538.28P34 probable thiol protease OS=Glycine max PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P22_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621644 ID=DN621644; Name=DN621644; organism=Citrus sinensis; type=EST; length=632bp
TAATAATAGTGTTCATAGACTGCATTCATTTAATCCGAAGCCCTTGAGTG
CAGTGTGCTCTCTCCAAACAAAGCAGACACAATCATTAGGCATGGCTCGC
CCCGTACAGTTGGTCTCGTCCGTCATCTTGTTGCTTTGCTGCGCTGCCGC
AGCATCAGCATCAGCATCAAGCTTCGACGACTCCAATCCGATCAGATTGG
TATCATCGGACGGTCTCCGTGACTTCGAGACCTCCGTCCTCCAGGTGATC
GGCCAAGCCCGCCATGCTCTCTCCTTTGCCCGTTTTGCTCGCAGGTATGG
GAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCCGGTTCGCGACTTTCT
CCAAGAACTTGGATTTAATCAGATCTACCAATTGTAAAGGCCTATCTTAC
AGGCTCGGGTTGAACAAGTTTGCTGACTGGAGCTGGGAAGAGTTCCAAAG
GCACAGGTTGGGAGCTGCGCAAAACTGCTCTGCCACTACAAAAGGAAATC
ACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGACTGGAGGGAATCT
GGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTGTGGATCTTGCTGGAC
TTTCAGCACGACTGGATCTCTTGAGGCTGCTT
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