DN621644

Overview
NameDN621644
Unique NameDN621644
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.549e-15
Identity = 50/138 (36.23%), Postives = 72/138 (52.17%), Query Frame = 2
Query:  233 SVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEA 628
            +++ VI  A     +A F + + + Y+S+ E KLRF  F   L  I   N K      +Y L +NKF+D + EEF R  L   +      +G     LT    PE+ DWR  G+V PV++QG CGSCW  ST  ++E+
Sbjct:    9 ALIVVINAASDQELWADFKKTHARTYKSLREEKLRFNIFQDTLRQIAEHNVKYENGESTYYLAINKFSDITDEEF-RDMLMKNEASRPNLEGLEVADLTVGAAPESIDWRSKGVVLPVRNQGECGSCWALSTAAAIES 145          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 4.635e-15
Identity = 49/132 (37.12%), Postives = 67/132 (50.76%), Query Frame = 2
Query:  272 SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHK--------LTADVLPETK--DWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            S+  F  ++G+ Y  +EE + R   F  NL  I   N K     ++Y L +N+F+D + E+F           +A  KG  K         + D  PE+   DWR  G V+PVKDQG CGSCW FSTTG +E
Sbjct:   19 SWEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKF-----------NAVMKGYKKGPRPAAVFTSTDAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIE 139          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.635e-15
Identity = 46/121 (38.02%), Postives = 67/121 (55.37%), Query Frame = 2
Query:  281 RFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKG----LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTAD--VLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            ++ R Y K Y   ++   R   + KN+  I+  N +     ++Y LGLN+F D ++EEF+   L      S          A+   +P+  DWRESG V+ VKDQG+CGSCW FSTTG++E
Sbjct:   23 QWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSHGVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTME 142          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 6.054e-15
Identity = 45/120 (37.50%), Postives = 67/120 (55.83%), Query Frame = 2
Query:  275 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADV--LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            F  +  ++ K Y++V+E   RF  F  NL  I   N     Y LGLN+F+D S +EF+   +G+  ++ +        +  D+  LPE+ DWR  G V+PVK QG+C SCW FST  ++E
Sbjct:   48 FNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVGSLPEDYTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVE 167          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.907e-15
Identity = 44/107 (41.12%), Postives = 62/107 (57.94%), Query Frame = 2
Query:  323 EMKLRFATFSKNLDLIRSTNCKGLS---YRLGLNKFADWSWEEFQRHRLGA--AQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEA 628
            E + RF  F  NL  + + N +      +RLG+N+FAD + EEF+   LGA  A+   A  +       + LPE+ DWRE G V+PVK+QG CGSCW FS   ++E+
Sbjct:   70 EHERRFLVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNEEFRATFLGAKVAERSRAAGERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVES 176          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.349e-14
Identity = 41/122 (33.61%), Postives = 68/122 (55.74%), Query Frame = 2
Query:  275 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK-GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTK---GNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEA 628
            F  +   YG++Y+  +E  LRF  F  N++ I + N + G SY LG+N+F D +  EF     G +   +   +       +    +P++ DWR+SG V+ VK+QG CGSCW F++  ++E+
Sbjct:   37 FEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLSLPLNIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVES 158          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 79.7221 bits (195), Expect = 1.349e-14
Identity = 44/114 (38.60%), Postives = 58/114 (50.88%), Query Frame = 2
Query:  293 RYGKIYESVEEMKLRFATFSKNLDLIRSTNCK-GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            +YGK Y S+ E + RF  F + L  I   N     SY++GLN+FAD + EEF+   L      + T   N        VLP   DWR +G V  +K QG CG CW FS   ++E
Sbjct:   48 KYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKTKVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVE 161          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.005e-14
Identity = 44/122 (36.07%), Postives = 63/122 (51.64%), Query Frame = 2
Query:  275 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL-SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV----LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            F +F  R+G+ Y S  E ++R   F +NL  I   N   + S + G+ +FAD +  E+ + R G  Q   A   G            LP+  DWR+   V+ VK+QG CGSCW FS TG++E
Sbjct:  308 FYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEY-KERTGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIE 428          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 5.125e-14
Identity = 43/115 (37.39%), Postives = 66/115 (57.39%), Query Frame = 2
Query:  293 RYGKIYESVEEMKLRFATFSKNLDLIRSTNCK-GLS---YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            +Y K Y  VEE +L+ A + +NL +I+  N + GL    + + +N FAD + EEF++         + T     K  +  LP  KDWR+ G V+PV++QG CGSCW F+  G++E
Sbjct:   35 KYAKSYSPVEE-ELKRAVWEENLKMIQLHNKENGLGKNGFTMEMNAFADTTGEEFRKSLSDILIPAAVTNPSAQKQVSIGLPNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAIE 148          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.125e-14
Identity = 45/121 (37.19%), Postives = 62/121 (51.24%), Query Frame = 2
Query:  275 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL---SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH-KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            F  F   Y + YES EE + R + F  N+  +R+   + L   + + G+ KF+D + EEF+   L          K    K   D+ P   DWR  G V+ VKDQG CGSCW FS TG++E
Sbjct:  187 FKNFVITYNRTYESKEEARWRLSVFVNNM--VRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVE 305          
The following BLAST results are available for this feature:
BLAST of DN621644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
CATLL_PHACE3.549e-1536.23Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CYSP1_HOMAM4.635e-1537.12Digestive cysteine proteinase 1 OS=Homarus america... [more]
CATLL_FASHE4.635e-1538.02Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
PAPA4_CARPA6.054e-1537.50Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
ORYB_ORYSJ7.907e-1541.12Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
ANAN_ANACO1.349e-1433.61Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
ACTN_ACTCH1.349e-1438.60Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CPR1_DROME3.005e-1436.07Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATJ_RAT5.125e-1437.39Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CATF_HUMAN5.125e-1437.19Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P22_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621644 ID=DN621644; Name=DN621644; organism=Citrus sinensis; type=EST; length=632bp
TAATAATAGTGTTCATAGACTGCATTCATTTAATCCGAAGCCCTTGAGTG
CAGTGTGCTCTCTCCAAACAAAGCAGACACAATCATTAGGCATGGCTCGC
CCCGTACAGTTGGTCTCGTCCGTCATCTTGTTGCTTTGCTGCGCTGCCGC
AGCATCAGCATCAGCATCAAGCTTCGACGACTCCAATCCGATCAGATTGG
TATCATCGGACGGTCTCCGTGACTTCGAGACCTCCGTCCTCCAGGTGATC
GGCCAAGCCCGCCATGCTCTCTCCTTTGCCCGTTTTGCTCGCAGGTATGG
GAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCCGGTTCGCGACTTTCT
CCAAGAACTTGGATTTAATCAGATCTACCAATTGTAAAGGCCTATCTTAC
AGGCTCGGGTTGAACAAGTTTGCTGACTGGAGCTGGGAAGAGTTCCAAAG
GCACAGGTTGGGAGCTGCGCAAAACTGCTCTGCCACTACAAAAGGAAATC
ACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGACTGGAGGGAATCT
GGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTGTGGATCTTGCTGGAC
TTTCAGCACGACTGGATCTCTTGAGGCTGCTT
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