DN621644

Overview
NameDN621644
Unique NameDN621644
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 6.694e-14
Identity = 50/129 (38.76%), Postives = 66/129 (51.16%), Query Frame = 2
Query:  275 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYR----LGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL--------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            F  F  ++ K Y S EE   RF  F  NL  I   N   ++++     G+NKFAD S +EF+ + L    N       +    AD L        P   DWR  G V+PVK+QG CGSCW+FSTTG++E
Sbjct:   29 FLEFQDKFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYL----NNKEAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVE 152          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.742e-14
Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = 2
Query:  275 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL---SYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            F  F   Y + YES EE + R   F++N+  IR+   + L   + + G+ KF+D + EEF    L    Q  S       K   D+ P   DWR+ G V+ VK+QG CGSCW FS TG++E
Sbjct:  165 FKDFMTTYNRTYESREEAQWRLTVFARNM--IRAQKIQALDRGTAQYGITKFSDLTEEEFHTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVE 283          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 8.742e-14
Identity = 45/119 (37.82%), Postives = 61/119 (51.26%), Query Frame = 2
Query:  269 LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            ++F ++A  + K++ +  E   RFA F  N   + +      +    LN FAD + EEF +  LG       TT  N K      PE+ DWR   I++P KDQG CGSCWTF TT  LE
Sbjct:   16 VAFKQWAATHNKVFANRAEYLYRFAVFLDNKKFVEA------NANTELNVFADMTHEEFIQTHLGMTYEVPETTS-NVKAAVKAAPESVDWRS--IMNPAKDQGQCGSCWTFCTTAVLE 125          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.142e-13
Identity = 42/122 (34.43%), Postives = 60/122 (49.18%), Query Frame = 2
Query:  272 SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            S+  F  +YG+ Y   +E   R   F +N  LI   N K     +++++ +N+F D + EEF     G  +      K      A  +    DWR   +V+PVKDQ  CGSCW FS TG+LE
Sbjct:   19 SWDHFKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNAVMKGYKKGSRGEPKAVFTAEAGPMAADVDWRTKALVTPVKDQEQCGSCWAFSATGALE 140          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.142e-13
Identity = 46/123 (37.40%), Postives = 64/123 (52.03%), Query Frame = 2
Query:  293 RYGKIYESVEEMKLRFATFSKNLDLIRSTN---CKG-LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV--------LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            ++ K Y +  E + R   F++N   I   N    +G +SY+LGLNK+AD    EF+    G         +    L            +P++ DWRE G V+ VKDQGHCGSCW FS+TG+LE
Sbjct:   34 QHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALE 156          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVS (Cysteine proteinase OS=Plasmodium vivax (strain Salvador I) PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.491e-13
Identity = 48/158 (30.38%), Postives = 77/158 (48.73%), Query Frame = 2
Query:  227 ETSVLQVIG---QARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRH----------------------RLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            E SV Q+ G     ++A  F  F  +Y + Y+ + E   ++  F  N   I+  N     Y++ +N+F+D+S ++F+ +                        G  +N   ++ G + L ADV PE  D+RE GIV   KDQG CGSCW F++ G++E
Sbjct:  218 EVSVAQIEGLFVNLKYASKFFNFMNKYKRSYKDINEQMEKYKNFKMNYLKIKKHNETNQMYKMKVNQFSDYSKKDFESYFRKLVPIPDHLKKKYVVPFSSMNNGKGKNVVTSSSGAN-LLADV-PEILDYREKGIVHEPKDQGLCGSCWAFASVGNVE 373          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.491e-13
Identity = 45/119 (37.82%), Postives = 63/119 (52.94%), Query Frame = 2
Query:  290 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN-HKLTADV------LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            R +  +  S+ E   RF  F  NL  + +TN     Y+L LNKFAD +  EF+    G+  N     +G  H+  A +      +P + DWR+ G V+ VKDQG CGSCW FST  ++E
Sbjct:   44 RSHHTVSRSLGEKHKRFNVFKANLMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVE 162          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.491e-13
Identity = 43/113 (38.05%), Postives = 63/113 (55.75%), Query Frame = 2
Query:  302 KIYESVEEMKLRFATFSKNLDLIRSTNC-KGLSYRLGLNKFADWSWEEFQ----RHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            K Y  + E + RF  F  NL  +   N     ++ +GL +FAD + EEF+    R ++   ++   T +  +K   DVLP+  DWR +G V  VKDQG+CGSCW FS  G++E
Sbjct:   53 KNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKMERTKDSVKTERYLYK-EGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVE 164          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.491e-13
Identity = 45/128 (35.16%), Postives = 63/128 (49.22%), Query Frame = 2
Query:  275 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRH----RLGAAQNCSATTKGNHKLTA------DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEA 628
            F  FA +Y K Y S EE  ++   F  NL +I   N         +N+++D +     R     RLG  +N SA T     +         +LPET DWR+   V+PVK+Q  CGSCW FST  ++E+
Sbjct:   32 FKNFAIKYNKTYVSDEERAIKLENFKNNLKMINEKNMASKYAVFDINEYSDLNKNALLRRTTGFRLGLKKNPSAFTMTECSVVVIKDEPQALLPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIES 159          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.322e-13
Identity = 42/119 (35.29%), Postives = 61/119 (51.26%), Query Frame = 2
Query:  290 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL-------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            R +  +  S+ E   RF  F  N+  + +TN     Y+L LNKFAD +  EF+    G+  N     +G+   +   +       P + DWR+ G V+ VKDQG CGSCW FST  ++E
Sbjct:   44 RSHHTVSRSLGEKHKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVE 162          
The following BLAST results are available for this feature:
BLAST of DN621644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
CYSP1_DICDI6.694e-1438.76Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATF_MOUSE8.742e-1438.02Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
ACP1_ENTHI8.742e-1437.82Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
CYSP3_HOMAM1.142e-1334.43Digestive cysteine proteinase 3 OS=Homarus america... [more]
CATL_SARPE1.142e-1337.40Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CYSP_PLAVS1.491e-1330.38Cysteine proteinase OS=Plasmodium vivax (strain Sa... [more]
CYSEP_PHAVU1.491e-1337.82Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CPR1_ARATH1.491e-1338.05Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CATV_GVCP1.491e-1335.16Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
CYSEP_VIGMU3.322e-1335.29Vignain OS=Vigna mungo PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P22_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621644 ID=DN621644; Name=DN621644; organism=Citrus sinensis; type=EST; length=632bp
TAATAATAGTGTTCATAGACTGCATTCATTTAATCCGAAGCCCTTGAGTG
CAGTGTGCTCTCTCCAAACAAAGCAGACACAATCATTAGGCATGGCTCGC
CCCGTACAGTTGGTCTCGTCCGTCATCTTGTTGCTTTGCTGCGCTGCCGC
AGCATCAGCATCAGCATCAAGCTTCGACGACTCCAATCCGATCAGATTGG
TATCATCGGACGGTCTCCGTGACTTCGAGACCTCCGTCCTCCAGGTGATC
GGCCAAGCCCGCCATGCTCTCTCCTTTGCCCGTTTTGCTCGCAGGTATGG
GAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCCGGTTCGCGACTTTCT
CCAAGAACTTGGATTTAATCAGATCTACCAATTGTAAAGGCCTATCTTAC
AGGCTCGGGTTGAACAAGTTTGCTGACTGGAGCTGGGAAGAGTTCCAAAG
GCACAGGTTGGGAGCTGCGCAAAACTGCTCTGCCACTACAAAAGGAAATC
ACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGACTGGAGGGAATCT
GGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTGTGGATCTTGCTGGAC
TTTCAGCACGACTGGATCTCTTGAGGCTGCTT
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