DN621644

Overview
NameDN621644
Unique NameDN621644
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.339e-13
Identity = 47/135 (34.81%), Postives = 69/135 (51.11%), Query Frame = 2
Query:  275 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL------------SYRLGLNKFADWSWEEFQRHRLGAAQNCSA--TTKGNH--KLTADV-LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEA 628
            F  F ++Y K Y+  +E + R+  F  NL+ I S N + L            S + G+NKF+D + +E      G   N S   T   N   K   D+ LP+  DWR++  V+P+KDQG CGSCW F   G++E+
Sbjct:   57 FKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTLCENRIVKGAPDIRLPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIES 191          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.666e-13
Identity = 43/121 (35.54%), Postives = 59/121 (48.76%), Query Frame = 2
Query:  290 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK-GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETK--------DWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            R +  +   ++E   RF  F +N+  I   N K    Y+L LNKF D + +EF+    G+      + +G  K T   + E          DWR  G V+ VKDQG CGSCW FST  S+E
Sbjct:   44 RTHHTVARDLDEKNRRFNVFKENVKFIHEFNQKKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRSQRGIQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVE 164          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.666e-13
Identity = 49/129 (37.98%), Postives = 64/129 (49.61%), Query Frame = 2
Query:  284 FARRYGKIYESVEEMKLRFATFSKNLDLIRSTN---CKG-LSYRLGLNKFADWSWEEF---------QRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAA 631
            F  ++GK Y + EE   R + F   L  I+  N    KG ++Y L +N F+D + EE          +RH L      + TT     + ADV     DWR  G V+PVKDQG CGSCW FS   +LE A
Sbjct:   23 FKTKFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLATKTGMTRRRHPLSVLPKSAPTTP----MAADV-----DWRNKGAVTPVKDQGQCGSCWAFSAVAALEGA 142          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.401e-13
Identity = 41/119 (34.45%), Postives = 59/119 (49.58%), Query Frame = 2
Query:  290 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTA-------DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            R +  +  S+ E + RF  F  N   + + N     Y+L LNKFAD +  EF+    G+        +G  +          D +P + DWR+ G V+ VKDQG CGSCW FST  ++E
Sbjct:   42 RSHHTVSRSLHEKQKRFNVFKHNAMHVHNANKMDKPYKLKLNKFADMTNHEFRNTYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVE 160          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CYSP_PLAFA (Trophozoite cysteine proteinase OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.262e-12
Identity = 46/153 (30.07%), Postives = 72/153 (47.06%), Query Frame = 2
Query:  248 IGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNC--KGLSYRLGLNKFADWSWEE----------------------FQRHRLGAAQNCSATTKG--NHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEA 628
            I   ++A  F +F + + K+Y++++E   +F  F  N   I++ N   K   Y+  +N+F+D+S EE                      F+ H           T G  N K     +PE  D+RE GIV   KDQG CGSCW F++ G++E+
Sbjct:  216 INNIKYASKFFKFMKEHNKVYKNIDEQMRKFEIFKINYISIKNHNKLNKNAMYKKKVNQFSDYSEEELKEYFKTLLHVPNHMIEKYSKPFENHLKDNILISEFYTNGKRNEKDIFSKVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNIES 368          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.262e-12
Identity = 40/115 (34.78%), Postives = 63/115 (54.78%), Query Frame = 2
Query:  293 RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            +Y K Y   EE  LR A + +N+ +I+  N +      ++ + +NKF D + EEF++         + T        +  LP+ KDWRE G V+PV++QG CGSCW F+  G++E
Sbjct:   35 KYAKSYSPKEEA-LRRAVWEENMRMIKLHNKENSLGKNNFTMKMNKFGDQTSEEFRKSIDNIPIPAAMTDPHAQNHVSIGLPDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIE 148          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.649e-12
Identity = 45/131 (34.35%), Postives = 69/131 (52.67%), Query Frame = 2
Query:  275 FARFARRYGKIYES----VEEMKLRFATFSKNLDLI--RSTNCKGLSYRLGLNKFADWSWEEFQRHRLGA----AQNCSATTKGNHKLTA----DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            + R++  +GK   +    + +   RF  F  NL  I   + N K  +Y+LGL  FA+ + +E++   LGA     +  +     N K +A    D +P T DWR+ G V+ +KDQG CGSCW FST  ++E
Sbjct:    4 YLRWSLEHGKSNSNSNGIINQQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAKNVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVE 134          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.153e-12
Identity = 43/108 (39.81%), Postives = 55/108 (50.93%), Query Frame = 2
Query:  323 EMKLRFATFSKNLDLIRSTNCKG-LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN------HKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            E   RF TF  N   I S N +G   YRL LN+F D    EF+   +G  +  + +   +        L    LP + DWR+ G V+ VKDQG CGSCW FST  S+E
Sbjct:   61 EKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPSKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVE 168          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.153e-12
Identity = 43/127 (33.86%), Postives = 63/127 (49.61%), Query Frame = 2
Query:  284 FARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV---------LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            F   + K Y+   E + R   F++N   I   N +     +S++L +NK+AD    EF++   G         +   +    V         LP++ DWR  G V+ VKDQGHCGSCW FS+TG+LE
Sbjct:   62 FKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALE 188          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.812e-12
Identity = 43/108 (39.81%), Postives = 54/108 (50.00%), Query Frame = 2
Query:  323 EMKLRFATFSKNLDLIRSTNCKG-LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN------HKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            E   RF TF  N   I S N +G   YRL LN+F D    EF+   +G  +  +     +        L    LP + DWR+ G V+ VKDQG CGSCW FST  S+E
Sbjct:   61 EKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPAKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVE 168          
The following BLAST results are available for this feature:
BLAST of DN621644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
CATV_NPVHZ4.339e-1334.81Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CYSP_HEMSP5.666e-1335.54Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CRUST_PANBO5.666e-1337.98Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CYSEP_RICCO7.401e-1334.45Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CYSP_PLAFA1.262e-1230.07Trophozoite cysteine proteinase OS=Plasmodium falc... [more]
CATJ_MOUSE1.262e-1234.78Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
CYSP4_BRANA1.649e-1234.35Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CYSP2_HORVU2.153e-1239.81Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CATL_DROME2.153e-1233.86Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CYSP1_HORVU2.812e-1239.81Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P22_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621644 ID=DN621644; Name=DN621644; organism=Citrus sinensis; type=EST; length=632bp
TAATAATAGTGTTCATAGACTGCATTCATTTAATCCGAAGCCCTTGAGTG
CAGTGTGCTCTCTCCAAACAAAGCAGACACAATCATTAGGCATGGCTCGC
CCCGTACAGTTGGTCTCGTCCGTCATCTTGTTGCTTTGCTGCGCTGCCGC
AGCATCAGCATCAGCATCAAGCTTCGACGACTCCAATCCGATCAGATTGG
TATCATCGGACGGTCTCCGTGACTTCGAGACCTCCGTCCTCCAGGTGATC
GGCCAAGCCCGCCATGCTCTCTCCTTTGCCCGTTTTGCTCGCAGGTATGG
GAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCCGGTTCGCGACTTTCT
CCAAGAACTTGGATTTAATCAGATCTACCAATTGTAAAGGCCTATCTTAC
AGGCTCGGGTTGAACAAGTTTGCTGACTGGAGCTGGGAAGAGTTCCAAAG
GCACAGGTTGGGAGCTGCGCAAAACTGCTCTGCCACTACAAAAGGAAATC
ACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGACTGGAGGGAATCT
GGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTGTGGATCTTGCTGGAC
TTTCAGCACGACTGGATCTCTTGAGGCTGCTT
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