DN621644

Overview
NameDN621644
Unique NameDN621644
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 3.673e-12
Identity = 45/121 (37.19%), Postives = 63/121 (52.07%), Query Frame = 2
Query:  290 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLNKFADWSWEE----FQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEA 628
            + YGK Y+   E  +R   + KNL  +   N +   G+ SY LG+N   D + EE        R+ +    + T K N      +LP++ DWRE G V+ VK QG CG+CW FS  G+LEA
Sbjct:   33 KTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKSNPNR---ILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEA 150          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.797e-12
Identity = 37/121 (30.58%), Postives = 62/121 (51.24%), Query Frame = 2
Query:  275 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL-SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTK---GNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            F  +   YG++Y+  +E   RF  F  N+  I + N +   SY LG+N+F D +  EF     G +   +   +       +    +P++ DWR+ G V+ VK+Q  CGSCW+F+   ++E
Sbjct:   37 FEEWMAEYGRVYKDDDEKMRRFQIFKNNVKHIETFNSRNENSYTLGINQFTDMTKSEFVAQYTGVSLPLNIEREPVVSFDDVNISAVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVE 157          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.265e-12
Identity = 50/153 (32.68%), Postives = 76/153 (49.67%), Query Frame = 2
Query:  191 IRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYES--VEEMKLRFATFSKNLDLIRSTNCKGLS---YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN--HKLTADVLPETKDWRESG-IVSPVKDQGHCGSCWTFSTTGSLE 625
            IR  +  G+R  E +  +   +A + L  AR  R  G    +  + E + RF  F  NL  + + N +      +RLG+N+FAD +  EF+   LG          G        + LP++ DWR+ G +V+PVK+QG CGSCW FS   ++E
Sbjct:   40 IRYNAEHGVRGLERTEAEA--RAAYDLWLARHRRGGGGGSRNGFIGEHERRFRVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNGEFRATYLGTTPAGRGRRVGEAYRHDGVEALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVE 190          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.182e-12
Identity = 45/121 (37.19%), Postives = 62/121 (51.24%), Query Frame = 2
Query:  290 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLNKFADWSWEE----FQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEA 628
            + YGK Y+   E  +R   + KNL  +   N +   G+ SY LG+N   D + EE        R+      + T K N      +LP++ DWRE G V+ VK QG CG+CW FS  G+LEA
Sbjct:   33 KTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPNQWQRNITYKSNPN---QMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEA 150          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.182e-12
Identity = 41/114 (35.96%), Postives = 61/114 (53.51%), Query Frame = 2
Query:  296 YGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLS----YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            +G++Y   EE   R A + KN+ +I   N +       + + +N F D + EEF++   G         K  H+     +P++ DWRE G V+ VK+QG CGSCW FS TG+LE
Sbjct:   36 HGRLYGMNEE-GWRRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKVFHESLVLEVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALE 148          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.069e-11
Identity = 44/127 (34.65%), Postives = 60/127 (47.24%), Query Frame = 2
Query:  269 LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV-------LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEA 628
            L F +F  +Y K Y S +E K R+  F  N++ I + N +  S    +N+FAD +  E      G A   S     N   T  V        P   DWR    V+ VKDQG CG+CW F+  G+LE+
Sbjct:   38 LYFEKFISQYNKQYSSEDEKKYRYNIFRHNIESINAKNSRNDSAVYKINRFADMTKNEVVNRHTGLA---SGDIGANFCETIVVDGPGQRQRPANFDWRNYNKVTSVKDQGMCGACWAFAGLGALES 161          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.109e-11
Identity = 45/121 (37.19%), Postives = 61/121 (50.41%), Query Frame = 2
Query:  290 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLNKFADWSWEE----FQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEA 628
            + YGK Y+   E   R   + KNL  +   N +   G+ SY LG+N   D + EE        R+ +    + T K +       LP++ DWRE G V+ VK QG CGSCW FS  G+LEA
Sbjct:   33 KTYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISLMSSLRVPSQWPRNVTYKSDPN---QKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEA 150          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 3.109e-11
Identity = 32/77 (41.56%), Postives = 44/77 (57.14%), Query Frame = 2
Query:  395 SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            S+ + +N F D + EEF++   G         K   +     +P + DWRE G ++PVKDQG CGSCW FS TG+LE
Sbjct:   15 SFTMAMNAFGDMTNEEFRQVMNGFQYQKHRKGKQFQERLLPEIPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALE 91          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.109e-11
Identity = 43/120 (35.83%), Postives = 62/120 (51.67%), Query Frame = 2
Query:  278 ARFARRYGKIYESVEEMKLRFATFSKN---LDLIRSTNCKGL-SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            A   R YG     + E + R A + KN   +DL      +G   +R+ +N F D + EEF++   G         K  H+     +P++ DW + G V+PVK+QG CGSCW FS TG+LE
Sbjct:   34 ATHRRLYG-----MNEEEWRRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALE 148          
BLAST of DN621644 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.109e-11
Identity = 41/121 (33.88%), Postives = 62/121 (51.24%), Query Frame = 2
Query:  275 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 625
            + ++   + ++Y   EE   R A + KN+ +I   N +      S+ + +N F D + EEF++   G         K   +      P + DWRE G V+PVK+QG CGSCW FS TG+LE
Sbjct:   29 WTKWKAMHNRLYGMNEE-GWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALE 148          
The following BLAST results are available for this feature:
BLAST of DN621644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
CATS_HUMAN3.673e-1237.19Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
BROM1_ANACO4.797e-1230.58Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CYSP1_ORYSJ6.265e-1232.68Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CATS_SAIBB8.182e-1237.19Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CATL1_PIG8.182e-1235.96Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATV_NPVMC1.069e-1134.65Viral cathepsin OS=Mamestra configurata nucleopoly... [more]
CATS_BOVIN3.109e-1137.19Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATL6_HUMAN3.109e-1141.56Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CATL2_BOVIN3.109e-1135.83Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATL1_HUMAN3.109e-1133.88Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P22_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621644 ID=DN621644; Name=DN621644; organism=Citrus sinensis; type=EST; length=632bp
TAATAATAGTGTTCATAGACTGCATTCATTTAATCCGAAGCCCTTGAGTG
CAGTGTGCTCTCTCCAAACAAAGCAGACACAATCATTAGGCATGGCTCGC
CCCGTACAGTTGGTCTCGTCCGTCATCTTGTTGCTTTGCTGCGCTGCCGC
AGCATCAGCATCAGCATCAAGCTTCGACGACTCCAATCCGATCAGATTGG
TATCATCGGACGGTCTCCGTGACTTCGAGACCTCCGTCCTCCAGGTGATC
GGCCAAGCCCGCCATGCTCTCTCCTTTGCCCGTTTTGCTCGCAGGTATGG
GAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCCGGTTCGCGACTTTCT
CCAAGAACTTGGATTTAATCAGATCTACCAATTGTAAAGGCCTATCTTAC
AGGCTCGGGTTGAACAAGTTTGCTGACTGGAGCTGGGAAGAGTTCCAAAG
GCACAGGTTGGGAGCTGCGCAAAACTGCTCTGCCACTACAAAAGGAAATC
ACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGACTGGAGGGAATCT
GGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTGTGGATCTTGCTGGAC
TTTCAGCACGACTGGATCTCTTGAGGCTGCTT
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