DN621643

Overview
NameDN621643
Unique NameDN621643
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CPR3_CAEEL (Cathepsin B-like cysteine proteinase 3 OS=Caenorhabditis elegans GN=cpr-3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.794e-14
Identity = 38/87 (43.68%), Postives = 54/87 (62.07%), Query Frame = -3
Query:  311 ELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 571
            E+Q  +    PV  +++V + F  YKSGVY  T   +  +   HAV  +G+GVE+GV YWLI NSWG ++G+ G+FK+  G N C I
Sbjct:  244 EIQTEIYHYGPVEASYKVYEDFYHYKSGVYHYT---SGKLVGGHAVKIIGWGVENGVDYWLIANSWGTSFGEKGFFKIRRGTNECQI 327          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.794e-14
Identity = 48/146 (32.88%), Postives = 73/146 (50.00%), Query Frame = -3
Query:  308 GGLPSQAFEYIKYNG-GLDTEEAYPYTGKDGVCK-FSSENVGVQVLD-SVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIA 736
            GG P  A  ++      L  +  YP+   +G C+ F     GV V D S     G EDE+  A+    P+ V  + +  ++ Y  G+     C +   + NHAV+  G+      PYW+++NSWG +WG  GY  ++MG N+CGIA
Sbjct:  163 GGSPLCALRWLNETQLKLVADSQYPFKAVNGQCRHFPQSQAGVSVKDFSAYNFRGQEDEMARALLSFGPLVVIVDAMS-WQDYLGGIIQH-HCSSG--EANHAVLITGFDRTGNTPYWMVRNSWGSSWGVEGYAHVKMGGNVCGIA 304          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATW_FELCA (Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.873e-14
Identity = 50/172 (29.07%), Postives = 76/172 (44.19%), Query Frame = -3
Query:  281 GGLPSQAFEYIKYNGGLDTEEAYPYTG--KDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV------------------PYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 736
            GG    AF  +  N GL +E+ YP+ G  K   C          + D + +    E ++   +    P++V   +    + YK GV  +T     P  V+H+V+ VG+G  + V                  P+W++KNSWG  WG  GYF++  G N CGI     YP+ A
Sbjct:  193 GGFVWDAFITVLNNSGLASEKDYPFQGQVKPHRCLAKKRTKVAWIQDFIMLP-DNEQKIAWYLATQGPITVTINM-KLLKLYKKGVIEATPTSCDPFLVDHSVLLVGFGKSESVADRRAGAAGAQPQSRRSIPFWILKNSWGTKWGXGGYFRLYRGNNTCGI---TKYPLTA 359          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CYSP_SCHJA (Cathepsin B-like cysteine proteinase OS=Schistosoma japonicum GN=CATB PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.159e-13
Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = -3
Query:  311 EDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 577
            E  +Q  + +  PV  AF+V + F  YKSG+Y         +   HA+  +G+GVE   PYWLI NSW E+WG+ G F+M  G++ C I
Sbjct:  246 EKVIQRDIMMYGPVEAAFDVYEDFLNYKSGIYRHV---TGSIVGGHAIRIIGWGVEKRTPYWLIANSWNEDWGEKGLFRMVRGRDECSI 331          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CPR6_CAEEL (Cathepsin B-like cysteine proteinase 6 OS=Caenorhabditis elegans GN=cpr-6 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.159e-13
Identity = 32/77 (41.56%), Postives = 48/77 (62.34%), Query Frame = -3
Query:  311 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 541
            P+ +AFEV + F  Y  GVY  T      +   HAV  +G+G++DG+PYW + NSW  +WG+ G+F++  G + CGI
Sbjct:  275 PLEIAFEVYEDFLNYDGGVYVHT---GGKLGGGHAVKLIGWGIDDGIPYWTVANSWNTDWGEDGFFRILRGVDECGI 348          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATW_HUMAN (Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.159e-13
Identity = 49/173 (28.32%), Postives = 78/173 (45.09%), Query Frame = -3
Query:  281 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVG-VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV---EDGV-----------------PYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 736
            GG    AF  +  N GL +E+ YP+ GK    +   +    V  +    +    E  +   +    P++V   +    + Y+ GV  +T     P  V+H+V+ VG+G    E+G+                 PYW++KNSWG  WG+ GYF++  G N CGI     +P+ A
Sbjct:  193 GGFVWDAFITVLNNSGLASEKDYPFQGKVRAHRCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKP-LQLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGI---TKFPLTA 361          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CPR5_CAEEL (Cathepsin B-like cysteine proteinase 5 OS=Caenorhabditis elegans GN=cpr-5 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.513e-13
Identity = 36/88 (40.91%), Postives = 52/88 (59.09%), Query Frame = -3
Query:  311 DELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 574
            +++Q  +    P+ VAF V + F  Y +GVY  T   +      HAV  +G+GV++G PYWL+ NSW   WG+ GYF++  G N CGI
Sbjct:  245 EQIQTEILTNGPIEVAFTVYEDFYQYTTGVYVHTAGASLG---GHAVKILGWGVDNGTPYWLVANSWNVAWGEKGYFRIIRGLNECGI 329          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CYSP1_OSTOS (Cathepsin B-like cysteine proteinase 1 OS=Ostertagia ostertagi GN=CP-1 PE=3 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 1.977e-13
Identity = 31/76 (40.79%), Postives = 46/76 (60.53%), Query Frame = -3
Query:  314 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCG 541
            PV   + V + F  Y+SG+Y       T +   HAV  +G+G E G PYW++ NSW ++WG++G+F+M  G N CG
Sbjct:  258 PVVATYTVYEDFAHYRSGIYKHKAGRKTGL---HAVKVIGWGEEKGTPYWIVANSWHDDWGENGFFRMHRGSNDCG 330          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CYSP_SCHMA (Cathepsin B-like cysteine proteinase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.372e-13
Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = -3
Query:  311 EDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 577
            E  +Q  +    PV  +F V + F  YKSG+Y             HA+  +G+GVE+  PYWLI NSW E+WG++GYF++  G++ C I
Sbjct:  245 EKAIQKEIMKYGPVEASFTVYEDFLNYKSGIYKHITGEALG---GHAIRIIGWGVENKTPYWLIANSWNEDWGENGYFRIVRGRDECSI 330          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATO_HUMAN (Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.404e-13
Identity = 47/150 (31.33%), Postives = 74/150 (49.33%), Query Frame = -3
Query:  296 GGLPSQAFEYI-KYNGGLDTEEAYPYTGKDGVCK-FSSENVGVQVLD-SVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCAS 736
            GG    A  ++ K    L  +  YP+  ++G+C  FS  + G  +   S       EDE+  A+    P+ V  + V  ++ Y  G+     C +   + NHAV+  G+      PYW+++NSWG +WG  GY  ++MG N+CGIA   S
Sbjct:  172 GGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPLVVIVDAVS-WQDYLGGIIQH-HCSSG--EANHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGIADSVS 317          
The following BLAST results are available for this feature:
BLAST of DN621643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
CPR3_CAEEL6.794e-1443.68Cathepsin B-like cysteine proteinase 3 OS=Caenorha... [more]
CATO_MOUSE6.794e-1432.88Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
CATW_FELCA8.873e-1429.07Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2[more]
CYSP_SCHJA1.159e-1340.45Cathepsin B-like cysteine proteinase OS=Schistosom... [more]
CPR6_CAEEL1.159e-1341.56Cathepsin B-like cysteine proteinase 6 OS=Caenorha... [more]
CATW_HUMAN1.159e-1328.32Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2[more]
CPR5_CAEEL1.513e-1340.91Cathepsin B-like cysteine proteinase 5 OS=Caenorha... [more]
CYSP1_OSTOS1.977e-1340.79Cathepsin B-like cysteine proteinase 1 OS=Ostertag... [more]
CYSP_SCHMA3.372e-1339.33Cathepsin B-like cysteine proteinase OS=Schistosom... [more]
CATO_HUMAN4.404e-1331.33Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621643 ID=DN621643; Name=DN621643; organism=Citrus sinensis; type=EST; length=738bp
TTTTTTTTCCTATAACAACTACCTTGCATTGACAAAATATATATAACATC
GTTGGTGTCCTAGTCACAATGACTGTTTACATGGACATAGATCTCAGAAT
TTATTTTGAACATCAAGCAGCCATGCATTGCTATTGTAGATTATATGGAC
ATTAATCTCCGAATTTATTTCGTACATAAAGCCAACCATTCTGCTATCAT
TCTTGAGTGAAATAATATAAGTTTTATGAGCAAATGACTTGCTGATAGCC
AGATCCAACTATTTCTTCAGGAGCAGACTAAGCCACAACTGGGTATGATG
CACAAGTTGCAATACCACACATGTTCTTCCCCATCTCCATCTTAAAGTAG
CCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAGCCAATATGG
AACACCATCTTCAACTCCGTACCCAACAGCAACGACGGCATGGTTCACAT
CCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAACTCCACTCTTGTAA
AATCGGAATCCATCTACTACTTCAAATGCCACACTCACAGGTCGAACAAG
ACCAACTGCATGCTGTAATTCATCTTCAGCACCCAAGGTAATGTTGACTG
AGTCCAGGACTTGGACGCCAACATTTTCAGATGAGAATTTGCAGACACCA
TCTTTTCCGGTGTAGGGATATGCTTCCTCAGTATCAAGGCCACCATTGTA
CTTGATGTATTCAAAGGCTTGGGATGGCAACCCACCAT
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