DN621643

Overview
NameDN621643
Unique NameDN621643
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:779..1516. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 7.737e-26
Identity = 68/158 (43.04%), Postives = 92/158 (58.23%), Query Frame = -3
Query:  287 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE--DGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 736
            GG+   AF +I  NGGLDTEE YPYT  DG C  +  +  V  +D   ++    E  LQ AV   +PVSVA +     F+ Y SGV++  +CG    +++H VVAVGYG +   G  YW ++NSWG +WG++GY +ME         CGIA  ASYP+
Sbjct:  222 GGIMDDAFAFIARNGGLDTEEDYPYTAMDGKCNLAKRSRKVVSIDGFEDVPENDELSLQKAVA-HQPVSVAIDAGGREFQLYDSGVFTG-RCGT---NLDHGVVAVGYGTDAATGAAYWTVRNSWGPDWGENGYIRMERNVTARTGKCGIAMMASYPI 374          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.737e-26
Identity = 62/153 (40.52%), Postives = 84/153 (54.90%), Query Frame = -3
Query:  284 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 736
            GG  ++AF+YI  N G+D+E +YPY   D  C++ S+           +  G ED L+ AV    PV V  +     F  Y+SGVY    C      VNH V+ +GYG  +G  YWL+KNSWG N+G+ GY +M   K N CGIA+  SYP +
Sbjct:  181 GGFMTEAFQYIIDNKGIDSEASYPYKATDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPAC---TQKVNHGVLVIGYGDLNGKEYWLVKNSWGSNFGEQGYIRMARNKGNHCGIASYPSYPEI 330          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.940e-25
Identity = 66/157 (42.04%), Postives = 86/157 (54.78%), Query Frame = -3
Query:  281 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKME----MGKNMCGIATCASYPVVA 736
            GG  + AF+YI  NGG+DT++ YPY+   G CK     V V +     +T   E  LQ AV   +PVSV  E     F+ Y SG+++   CG      NH VV VGYG + G  YW+++NSWG+NWG+ GY  ME        +CGIA   SYP  A
Sbjct:   65 GGWMNNAFQYIITNGGIDTQQNYPYSAVQGSCKPYRLRV-VSINGFQRVTRNNESALQSAVAS-QPVSVTVEAAGAPFQHYSSGIFTGP-CGTAQ---NHGVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTKA 215          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.840e-25
Identity = 65/152 (42.76%), Postives = 84/152 (55.26%), Query Frame = -3
Query:  290 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV--GLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 736
            GGL S  ++YI  NG +  E  YPYTG D  CK ++     ++     +    E EL+ A+  GLV    V+ +     F+ YKSG YS TKC N    +NH V AVGYGV DG   W+++NSWG  WGD GY  M +  N CG+AT   YP
Sbjct:  156 GGLGSNVYDYIIQNG-VAKESDYPYTGTDSTCK-TNVKAFAKITGYNKVPRNNEAELKAALSQGLV---DVSIDASSAKFQLYKSGAYSDTKCKNNFFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVATDPLYP 302          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.840e-25
Identity = 61/154 (39.61%), Postives = 85/154 (55.19%), Query Frame = -3
Query:  284 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD--GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 736
            GG  ++AF+YI  +  +D+E +YPY   D  C +  +N        + +  G E+ L+ AV    PVSV  +      F  Y+SGVY    C     ++NH V+ VGYG  DG  YWL+KNSWG ++GD GY +M    KN CGIA+  SYP +
Sbjct:  181 GGFMTEAFQYI-IDTSIDSEASYPYKAMDEKCLYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSGVYDDPSCTE---NMNHGVLVVGYGTLDGKDYWLVKNSWGLHFGDQGYIRMARNNKNHCGIASYCSYPEI 330          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.550e-25
Identity = 70/190 (36.84%), Postives = 98/190 (51.58%), Query Frame = -3
Query:  287 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE--------------------------------DGV-----PYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPV 736
            GGL + AF+YI  N G+DTE +YPYT + G  C F+  ++G  +   VNIT G+E  L++      PVSVA +   + F+ Y SG+Y   KC  +P +++H V+ VGYGV+                                D V      YW++KNSWG +WG  GY  M    KN CGIA+ +SYP+
Sbjct:  189 GGLMNNAFDYIIKNKGIDTESSYPYTAETGSTCLFNKSDIGATIKGYVNITAGSEISLENG-AQHGPVSVAIDASHNSFQLYTSGIYYEPKC--SPTELDHGVLVVGYGVQGKDDEGPVLNRKQTIVIHKNEDNKVESSDDSSDSVRPKANNYWIVKNSWGTSWGIKGYILMSKDRKNNCGIASVSSYPL 375          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.550e-25
Identity = 63/152 (41.45%), Postives = 84/152 (55.26%), Query Frame = -3
Query:  290 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV--GLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 736
            GGL S  ++YI    G+  E  YPYTG D  CK + ++   ++     +    E EL+ A+  GLV    V+ +     F+ YKSG Y+ TKC N    +NH V AVGYGV DG   W+++NSWG  WGD GY  M +  N CG+AT   YP
Sbjct:  163 GGLGSNVYDYI-IEHGVAKESDYPYTGSDSTCKTNVKSFA-KITGYTKVPRNNEAELKAALSQGLV---DVSIDASSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVATDPLYP 309          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: ACP2_ENTHI (Cysteine proteinase ACP2 (Fragment) OS=Entamoeba histolytica GN=ACP2 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.550e-25
Identity = 63/152 (41.45%), Postives = 86/152 (56.58%), Query Frame = -3
Query:  290 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV--GLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 736
            GGL S  ++YI    G+  E  YPYTG D  CK + ++   ++     +    E EL+ A+  GL+    V+ +V    F+ YKSG Y+ TKC N    +NH V AVGYGV DG   W+++NSWG +WGD GY  M +  N CG+AT   YP
Sbjct:  158 GGLGSNVYDYI-IEHGVAKESDYPYTGSDSTCKTNVKSFR-KITGYTKVPRNNEAELKAALSQGLL---DVSIDVSSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTSWGDKGYINMVIEGNTCGVATDPLYP 304          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.554e-25
Identity = 64/151 (42.38%), Postives = 83/151 (54.97%), Query Frame = -3
Query:  290 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV--GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 736
            GGL S  + YI  NG +  E  YPYTG D  C+ S      ++     +    E EL+ A+  GLV  VS+    V  F+ YKSG Y+ T+C N    +NH V AVGYGV DG   W+++NSWG  WG+ GY  M +  N CG+AT   YP
Sbjct:  163 GGLGSNVYNYIMENG-IAKESDYPYTGSDSTCR-SDVKAFAKIKSYNRVARNNEVELKAAISQGLV-DVSIDASSVQ-FQLYKSGAYTDTQCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGEKGYINMVIEGNTCGVATDPLYP 309          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.554e-25
Identity = 64/151 (42.38%), Postives = 82/151 (54.30%), Query Frame = -3
Query:  284 AFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV----EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 718
            A  Y+  NGGL++E  YPY  KDG C++S EN    +          ED L +AV  + P+SVA +     F FYK G+Y    C +    V H+++ VGYG      DG  YWL+KNS G  WG+ GY K+   K N CGIAT A YP V
Sbjct:  186 ALHYVMENGGLESEATYPYEEKDGSCRYSPENSTANI-TGFEFVPKNEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSSCV--VTHSMLLVGYGFTGRESDGRKYWLVKNSMGTQWGNKGYMKISRDKGNHCGIATYALYPRV 333          
The following BLAST results are available for this feature:
BLAST of DN621643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
CYSP1_ORYSJ7.737e-2643.04Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CATS_SAIBB7.737e-2640.52Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
ERVB_TABDI2.940e-2542.04Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CPP3_ENTHI3.840e-2542.76Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]
CATS_RAT3.840e-2539.61Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CYSP2_DICDI6.550e-2536.84Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
CPP2_ENTHI6.550e-2541.45Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
ACP2_ENTHI6.550e-2541.45Cysteine proteinase ACP2 (Fragment) OS=Entamoeba h... [more]
CPP1_ENTHI8.554e-2542.38Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
CATM_MOUSE8.554e-2542.38Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621643 ID=DN621643; Name=DN621643; organism=Citrus sinensis; type=EST; length=738bp
TTTTTTTTCCTATAACAACTACCTTGCATTGACAAAATATATATAACATC
GTTGGTGTCCTAGTCACAATGACTGTTTACATGGACATAGATCTCAGAAT
TTATTTTGAACATCAAGCAGCCATGCATTGCTATTGTAGATTATATGGAC
ATTAATCTCCGAATTTATTTCGTACATAAAGCCAACCATTCTGCTATCAT
TCTTGAGTGAAATAATATAAGTTTTATGAGCAAATGACTTGCTGATAGCC
AGATCCAACTATTTCTTCAGGAGCAGACTAAGCCACAACTGGGTATGATG
CACAAGTTGCAATACCACACATGTTCTTCCCCATCTCCATCTTAAAGTAG
CCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAGCCAATATGG
AACACCATCTTCAACTCCGTACCCAACAGCAACGACGGCATGGTTCACAT
CCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAACTCCACTCTTGTAA
AATCGGAATCCATCTACTACTTCAAATGCCACACTCACAGGTCGAACAAG
ACCAACTGCATGCTGTAATTCATCTTCAGCACCCAAGGTAATGTTGACTG
AGTCCAGGACTTGGACGCCAACATTTTCAGATGAGAATTTGCAGACACCA
TCTTTTCCGGTGTAGGGATATGCTTCCTCAGTATCAAGGCCACCATTGTA
CTTGATGTATTCAAAGGCTTGGGATGGCAACCCACCAT
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