DN621642

Overview
NameDN621642
Unique NameDN621642
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length214
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: BIP2_DICDI (Luminal-binding protein 2 OS=Dictyostelium discoideum GN=bip2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.085e-13
Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAI 212
            NDK RLS+ +I++MV+EA     ED+  K++VEAKN LENY Y ++NT+ D +KIG K++  DK+ IE AI
Sbjct:  531 NDKERLSQADIDRMVKEAADAADEDKAAKERVEAKNTLENYIYQIKNTIGDKDKIGGKIESDDKETIETAI 601          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP7C_DROME (Heat shock 70 kDa protein cognate 3 OS=Drosophila melanogaster GN=Hsc70-3 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 7.947e-13
Identity = 31/71 (43.66%), Postives = 57/71 (80.28%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAI 212
            ND+ RL+ ++I++M+++AEK+  ED++ K++VE++N LE+YAY+++N + D +K+G+KL   +K K+E AI
Sbjct:  528 NDQNRLTPEDIDRMIRDAEKFADEDKKLKERVESRNELESYAYSLKNQIGDKDKLGAKLSDDEKNKLESAI 598          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: GRP78_SPETR (78 kDa glucose-regulated protein OS=Spermophilus tridecemlineatus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.947e-13
Identity = 32/71 (45.07%), Postives = 53/71 (74.65%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAI 212
            ND+ RL+ +EIE+MV +AEK+  ED+  K++++ +N LE+YAY+++N + D EK+G KL   DK+ +E A+
Sbjct:  528 NDQNRLTPEEIERMVNDAEKFAEEDKRLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAV 598          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: GRP78_PIG (78 kDa glucose-regulated protein (Fragment) OS=Sus scrofa GN=HSPA5 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.770e-12
Identity = 32/71 (45.07%), Postives = 53/71 (74.65%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAI 212
            ND+ RL+ +EIE+MV +AEK+  ED++ K++++ +N LE+YAY ++N + D EK+G KL   DK+ +E A+
Sbjct:  172 NDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYCLKNQIGDKEKLGGKLSSEDKETMEKAV 242          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: MAG29_DERFA (Allergen MAG29 (Fragment) OS=Dermatophagoides farinae GN=MAG29 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.944e-12
Identity = 31/63 (49.21%), Postives = 47/63 (74.60%), Query Frame = 3
Query:   24 KDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            KD+IE+MV+EAE YK ED++ + ++ AKN+LE YA+ M+ T+ +E I SK+   D+KKI D +
Sbjct:    1 KDDIERMVKEAESYKEEDDKQRDRIAAKNSLEGYAFQMKATLDEEAIKSKVSEEDRKKILDKV 63          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.944e-12
Identity = 31/68 (45.59%), Postives = 52/68 (76.47%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLS+ +I++MV EAEK++ EDE+ ++++ A+N LE Y +N++ ++ D +  SKL  AD+K ++D
Sbjct:  504 NDKGRLSQADIDRMVSEAEKFREEDEKQRERISARNQLEAYCFNLKQSL-DGEGASKLSDADRKTVQD 570          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP7X_PIG (Heat shock 70 kDa protein (Fragment) OS=Sus scrofa PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.151e-12
Identity = 29/68 (42.65%), Postives = 50/68 (73.53%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            +DKGRLSK+E+E+MV+EA  +K EDE  + +V AKN+LE Y ++++ ++ +E +  K+   D+ K++D
Sbjct:  246 SDKGRLSKEEVERMVREAASHKVEDEAQRDRVAAKNSLEAYVFHVKGSLHEESLRDKIPEEDRCKVQD 313          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: GRP78_KLULA (78 kDa glucose-regulated protein homolog OS=Kluyveromyces lactis GN=GRP78 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.151e-12
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLS+D+I++MV+EAEKY AED + K K EA+N  EN+ + ++N+V  E +   +D  DK+ + D +
Sbjct:  549 NDKGRLSQDDIDRMVEEAEKYAAEDAKFKAKSEARNTFENFVHYVKNSVNGE-LAEIMDEDDKETVLDNV 617          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP72_ANOAL (Heat shock protein 70 A2 OS=Anopheles albimanus GN=HSP70A2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.787e-12
Identity = 31/68 (45.59%), Postives = 51/68 (75.00%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLS+ +I++MV EAEKY+ EDE+ ++ + A+N LE Y +N++ ++ D +  SKL  AD++ ++D
Sbjct:  504 NDKGRLSQADIDRMVSEAEKYREEDEKQREAIAARNQLEAYCFNLKQSL-DGEGSSKLSDADRRTVQD 570          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP71_ANOAL (Heat shock protein 70 A1 OS=Anopheles albimanus GN=HSP70A1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.787e-12
Identity = 31/68 (45.59%), Postives = 51/68 (75.00%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLS+ +I++MV EAEKY+ EDE+ ++ + A+N LE Y +N++ ++ D +  SKL  AD++ ++D
Sbjct:  504 NDKGRLSQADIDRMVSEAEKYREEDEKQREAIAARNQLEAYCFNLKQSL-DGEGSSKLSEADRRTVQD 570          
The following BLAST results are available for this feature:
BLAST of DN621642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
BIP2_DICDI6.085e-1352.11Luminal-binding protein 2 OS=Dictyostelium discoid... [more]
HSP7C_DROME7.947e-1343.66Heat shock 70 kDa protein cognate 3 OS=Drosophila ... [more]
GRP78_SPETR7.947e-1345.0778 kDa glucose-regulated protein OS=Spermophilus t... [more]
GRP78_PIG1.770e-1245.0778 kDa glucose-regulated protein (Fragment) OS=Sus... [more]
MAG29_DERFA3.944e-1249.21Allergen MAG29 (Fragment) OS=Dermatophagoides fari... [more]
HSP74_ANOAL3.944e-1245.59Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP7X_PIG5.151e-1242.65Heat shock 70 kDa protein (Fragment) OS=Sus scrofa... [more]
GRP78_KLULA5.151e-1247.1478 kDa glucose-regulated protein homolog OS=Kluyve... [more]
HSP72_ANOAL8.787e-1245.59Heat shock protein 70 A2 OS=Anopheles albimanus GN... [more]
HSP71_ANOAL8.787e-1245.59Heat shock protein 70 A1 OS=Anopheles albimanus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621642 ID=DN621642; Name=DN621642; organism=Citrus sinensis; type=EST; length=214bp
CCAACGACAAGGGTAGATTGTCAAAGGATGAAATTGAGAAGATGGTTCAA
GAGGCCGAGAAGTACAAGGCTGAAGATGAGGAGCACAAGAAGAAGGTCGA
GGCCAAGAATGCCTTGGAAAACTATGCCTACAATATGAGGAACACTGTCA
AGGACGAGAAGATCGGCTCCAAACTTGATCCAGCTGACAAGAAGAAGATT
GAGGATGCCATTGA
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