DN621642

Overview
NameDN621642
Unique NameDN621642
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length214
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2889 contig Csv1_Contig2889:141..354. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP7D_MANSE (Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.683e-18
Identity = 40/68 (58.82%), Postives = 57/68 (83.82%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSK+EIE+MV EAEKY+ EDE+ K+ ++AKNALE+Y +NM++T++DEK+  K+  +DK+ I D
Sbjct:  505 NDKGRLSKEEIERMVNEAEKYRNEDEKQKETIQAKNALESYCFNMKSTMEDEKLKDKISDSDKQTILD 572          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 3.683e-18
Identity = 38/62 (61.29%), Postives = 56/62 (90.32%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPAD 188
            NDKGRLS+DEI++MV +AEKYKAEDEE++K++EA+N+LENY Y ++++++D+KI  KL PA+
Sbjct:  518 NDKGRLSQDEIDRMVNDAEKYKAEDEENRKRIEARNSLENYCYGVKSSLEDQKIKEKLQPAE 579          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 3.683e-18
Identity = 42/68 (61.76%), Postives = 55/68 (80.88%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSK+EIE+MV +AEKYKAEDE  ++K+ AKNALE+YA+NM++ V DE +  K+  +DK KI D
Sbjct:  507 NDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSVVSDEGLKGKISESDKNKILD 574          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.810e-18
Identity = 39/68 (57.35%), Postives = 57/68 (83.82%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSK++IEKMVQEAEKYKA+D+  +++V+AKNALE+YA+N+++ V+DE +  K+   DK+ I +
Sbjct:  506 NDKGRLSKEDIEKMVQEAEKYKADDDAQRERVDAKNALESYAFNLKSMVEDENVKGKISDEDKRTISE 573          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.810e-18
Identity = 38/68 (55.88%), Postives = 58/68 (85.29%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSK++IE+MVQ+A+KYKAED+  ++K+ AKN+LE+YA+NM+++V+D+ +  K+   DKKK+ D
Sbjct:  507 NDKGRLSKEDIERMVQDADKYKAEDDAQREKIAAKNSLESYAFNMKSSVEDDNMKGKISQEDKKKVVD 574          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_ONCVO (Heat shock 70 kDa protein (Fragment) OS=Onchocerca volvulus PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 6.282e-18
Identity = 40/58 (68.97%), Postives = 51/58 (87.93%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKL 176
            NDKGRLSKDEIE+MVQEAEKYKA+DE  K ++ AKNALE+YA+NM+ T++DEK+  K+
Sbjct:  262 NDKGRLSKDEIERMVQEAEKYKADDEAQKDRIAAKNALESYAFNMKQTIEDEKLKDKI 319          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.400e-17
Identity = 41/68 (60.29%), Postives = 56/68 (82.35%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN+L++YA+NM+ TV+DEK+  K+   D + I D
Sbjct:  505 NDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLDSYAFNMKATVEDEKLPGKILDEDHQNILD 572          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.400e-17
Identity = 39/70 (55.71%), Postives = 56/70 (80.00%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSK+EI++MV EAEKYKAEDE    +++AKN LE+YAY++RN++ D  +  K+D +DK+ I+ A+
Sbjct:  503 NDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAV 572          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.828e-17
Identity = 37/62 (59.68%), Postives = 55/62 (88.71%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPAD 188
            NDKGRLS +EI++MV +AEKYKAEDEE+KK++EA+N+LENY Y ++++++D+KI  KL P++
Sbjct:  518 NDKGRLSPEEIDRMVNDAEKYKAEDEENKKRIEARNSLENYCYGVKSSLEDQKIKEKLQPSE 579          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP73_PLAFA (Heat shock 70 kDa protein PPF203 (Fragment) OS=Plasmodium falciparum PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.387e-17
Identity = 37/65 (56.92%), Postives = 54/65 (83.08%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKK 197
            NDKGRLSKD+I++MV +AEKYK EDE++K ++EA+N LENY YN++NT++DE + +K+   D +K
Sbjct:  105 NDKGRLSKDDIDRMVNDAEKYKEEDEQNKNRIEARNNLENYCYNVKNTLQDENLKTKIPKDDSEK 169          
The following BLAST results are available for this feature:
BLAST of DN621642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
HSP7D_MANSE3.683e-1858.82Heat shock 70 kDa protein cognate 4 OS=Manduca sex... [more]
HSP70_PLAFA3.683e-1861.29Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]
HS71L_HUMAN3.683e-1861.76Heat shock 70 kDa protein 1-like OS=Homo sapiens G... [more]
HSP70_XENLA4.810e-1857.35Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]
HSP70_ONCTS4.810e-1855.88Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HSP70_ONCVO6.282e-1868.97Heat shock 70 kDa protein (Fragment) OS=Onchocerca... [more]
HSP7C_CHICK1.400e-1760.29Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
HSP71_SCHPO1.400e-1755.71Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
HSP70_PLACB1.828e-1759.68Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]
HSP73_PLAFA2.387e-1756.92Heat shock 70 kDa protein PPF203 (Fragment) OS=Pla... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621642 ID=DN621642; Name=DN621642; organism=Citrus sinensis; type=EST; length=214bp
CCAACGACAAGGGTAGATTGTCAAAGGATGAAATTGAGAAGATGGTTCAA
GAGGCCGAGAAGTACAAGGCTGAAGATGAGGAGCACAAGAAGAAGGTCGA
GGCCAAGAATGCCTTGGAAAACTATGCCTACAATATGAGGAACACTGTCA
AGGACGAGAAGATCGGCTCCAAACTTGATCCAGCTGACAAGAAGAAGATT
GAGGATGCCATTGA
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