DN621641

Overview
NameDN621641
Unique NameDN621641
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_VIBPR (Chaperone protein dnaK OS=Vibrio proteolyticus GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13
Identity = 44/95 (46.32%), Postives = 60/95 (63.16%), Query Frame = -2
Query:  404 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQ 688
            A+GIL+VSA+DK TG++ KITI    G LS DEIEKMVQEAE  K  D++ ++   A+N  +   +  R  V  E+ G  L   DK+KIE A+ +
Sbjct:  479 ADGILHVSAKDKQTGKEQKITI-QASGGLSDDEIEKMVQEAEANKEADKKFEELATARNQADQMIHGTRKQV--EEAGDALPAEDKEKIEAAVSE 570          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_VIBPA (Chaperone protein dnaK OS=Vibrio parahaemolyticus GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13
Identity = 49/114 (42.98%), Postives = 68/114 (59.65%), Query Frame = -2
Query:  347 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDK 688
            A+GIL+VSA+DK TG++ KITI    G LS DEIEKMVQEAE  K  D++ ++   A+N  +   +  R  +  E+ G  L   +K+KIE AI         ++L EA + EDK
Sbjct:  479 ADGILHVSAKDKQTGKEQKITI-QASGGLSDDEIEKMVQEAEANKEADKKFEELATARNQADQMIHGTRKQM--EEAGDALPAEEKEKIETAI---------SELEEARKGEDK 580          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_THICR (Chaperone protein dnaK OS=Thiomicrospira crunogena (strain XCL-2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13
Identity = 48/130 (36.92%), Postives = 74/130 (56.92%), Query Frame = -2
Query:  299 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 688
            ANGILNVSA+DK T ++  ITI    G LS+DEIE MV++AE + AED + K+ VEA+N  +   +  +  + ++  G  ++ A+K+ IE AI    + +  +  A  DE   K + L +    +  K Y
Sbjct:  480 ANGILNVSAKDKATNKEQHITIQASSG-LSEDEIEAMVKDAEAHAAEDAKLKELVEARNQADAMVHGTKKLLDEQ--GEGVEAAEKEAIEKAIADLEEAIKGDDKAVIDE---KTQALATASQKLAEKAY 603          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_RHOS7 (Chaperone protein dnaK OS=Rhodopseudomonas sp. (strain No.7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13
Identity = 45/131 (34.35%), Postives = 75/131 (57.25%), Query Frame = -2
Query:  296 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 688
            ANGI+NVSA+DK TG++ +I I    G LS  EI+KMV++AE   AED++ ++ V+AKN  +   ++    + +   GSK+D  +++ IEDA+    + L  +   +A+  + K   L      +   MY+
Sbjct:  475 ANGIVNVSAKDKATGKEQQIRI-QASGGLSDSEIDKMVKDAEANAAEDKKRREAVDAKNHADALVHSTEKALAEH--GSKIDEGERRSIEDALSDLREALKGD---DAEAIKTKSNTLAQASMKLGEAMYK 599          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_PSEA6 (Chaperone protein dnaK OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13
Identity = 46/118 (38.98%), Postives = 70/118 (59.32%), Query Frame = -2
Query:  335 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKEL 688
            A+GIL+VSA+DK T ++ KITI    G LS DE+EKMVQ+AE  K  D++ ++ V+A+N  +   +  R  V  E+ G  L   DK +IE A+   +   ++ +  E +  E K +EL
Sbjct:  480 ADGILHVSAKDKDTNKEQKITIKASSG-LSDDEVEKMVQDAEANKEADKQFEEMVQARNQADGLIHGTRKQV--EEAGDALSDEDKAEIEAAV---VALEEAVKAGEKEAIESKTQEL 591          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_PELCD (Chaperone protein dnaK OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13
Identity = 43/121 (35.54%), Postives = 73/121 (60.33%), Query Frame = -2
Query:  326 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESI 688
            ANGIL+VSA+D  TG++  I IT   G LS +EI+KMV++AE + +ED++ ++ +EA+N  +  AY+   ++K+   G K+D   +  I+ A+D            E D+ ED  ++ E++
Sbjct:  475 ANGILHVSAKDLGTGKEQSIRITASSG-LSDEEIDKMVKDAEAHSSEDKKKREIIEARNQADGLAYSTEKSLKEH--GDKIDEETRNNIQTALDAL------KAAMEGDDPEDIRQKSEAL 586          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_OLICO (Chaperone protein dnaK OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13
Identity = 41/93 (44.09%), Postives = 62/93 (66.67%), Query Frame = -2
Query:  410 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 688
            ANGI+NVSA+DK TG++ +I I    G LS+ EIEKMV+EAE   AED++ ++ V+AKN  +   ++    + +   GSK+   ++K IEDA+
Sbjct:  475 ANGIVNVSAKDKATGKEQQIRI-QASGGLSESEIEKMVKEAEANAAEDKKRREAVDAKNHADALVHSTEKALAEH--GSKVGEGERKAIEDAL 564          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_NITWN (Chaperone protein dnaK OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13
Identity = 44/131 (33.59%), Postives = 78/131 (59.54%), Query Frame = -2
Query:  296 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 688
            ANGI+NVSA+DK TG++ +I I    G LS+ +IEKMV++AE   AED++ ++ V+AKN  ++  ++    + +   GSK++ ++++ IEDA+    + L  +   +A+  + K   L      +   MY+
Sbjct:  475 ANGIVNVSAKDKATGKEQQIRI-QASGGLSEADIEKMVKDAEANAAEDKKRREAVDAKNQADSLVHSTEKALTEH--GSKIEESERRAIEDAVSDLKEALKGD---DAEAIKAKTNTLAQASMKLGEAMYK 599          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_COXBU (Chaperone protein dnaK OS=Coxiella burnetii GN=dnaK PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13
Identity = 49/160 (30.63%), Postives = 82/160 (51.25%), Query Frame = -2
Query:  209 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSAAGPKIEEV 688
            ANGIL+VSA+DK TG++  I I    G LS +E+EKMV++AE ++  D +  + V+A+N  +   +    +VKD  +GS++   +K  IE A+++  + +  N   + D  E K K L    + +  ++Y                    + AG K E+V
Sbjct:  485 ANGILHVSAKDKATGKEQSIVIKASSG-LSDEEVEKMVKDAEAHRDSDRKFHELVDARNQADAMIHAAEKSVKD--LGSEVSADEKSAIEKAVNELKEAMKGN---DKDAIEAKTKALTEHSSKLAERVYAKKGGAAGAPPGGEAEGEPQAQAGGKKEDV 638          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_COXBR (Chaperone protein dnaK OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13
Identity = 49/160 (30.63%), Postives = 82/160 (51.25%), Query Frame = -2
Query:  209 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSAAGPKIEEV 688
            ANGIL+VSA+DK TG++  I I    G LS +E+EKMV++AE ++  D +  + V+A+N  +   +    +VKD  +GS++   +K  IE A+++  + +  N   + D  E K K L    + +  ++Y                    + AG K E+V
Sbjct:  485 ANGILHVSAKDKATGKEQSIVIKASSG-LSDEEVEKMVKDAEAHRDSDRKFHELVDARNQADAMIHAAEKSVKD--LGSEVSADEKSAIEKAVNELKEAMKGN---DKDAIEAKTKALTEHSSKLAERVYAKKGGAAGAPPGGEAEGEPQAQAGGKKEDV 638          
The following BLAST results are available for this feature:
BLAST of DN621641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_VIBPR8.723e-1346.32Chaperone protein dnaK OS=Vibrio proteolyticus GN=... [more]
DNAK_VIBPA8.723e-1342.98Chaperone protein dnaK OS=Vibrio parahaemolyticus ... [more]
DNAK_THICR8.723e-1336.92Chaperone protein dnaK OS=Thiomicrospira crunogena... [more]
DNAK_RHOS78.723e-1334.35Chaperone protein dnaK OS=Rhodopseudomonas sp. (st... [more]
DNAK_PSEA68.723e-1338.98Chaperone protein dnaK OS=Pseudoalteromonas atlant... [more]
DNAK_PELCD8.723e-1335.54Chaperone protein dnaK OS=Pelobacter carbinolicus ... [more]
DNAK_OLICO8.723e-1344.09Chaperone protein dnaK OS=Oligotropha carboxidovor... [more]
DNAK_NITWN8.723e-1333.59Chaperone protein dnaK OS=Nitrobacter winogradskyi... [more]
DNAK_COXBU8.723e-1330.63Chaperone protein dnaK OS=Coxiella burnetii GN=dna... [more]
DNAK_COXBR8.723e-1330.63Chaperone protein dnaK OS=Coxiella burnetii (strai... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06P21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621641 ID=DN621641; Name=DN621641; organism=Citrus sinensis; type=EST; length=689bp
TTTTTTTTTTTTTTTTAGGGACTGAAAAATATTCATTATATAAATTGGGT
CCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAAGGAAAAATTAATA
TTCATCCTAAGGCTAAAGCAACATAAGATAAAAACCAAACGTCCAGTTTT
CCCACCGTCAAAAAACCGACCTCCCACAAACACAGCAAAATAAACTGGAA
GCTTAGTCAACTTCCTCAATCTTGGGACCGGCGGCACTGCCACCAGCTGG
AGGAGTATCATCATCCATGTCACCGCCCATATCACCACCAGCACCTTGAT
ACATCTTGGCAATGATGGGATTGCAGATGCTCTCAAGCTCCTTCATCTTG
TCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTATCAAGCCATTGAAT
TGCCTGGTCAATGGCATCCTCAATCTTCTTCTTGTCAGCTGGATCAAGTT
TGGAGCCGATCTTCTCGTCCTTGACAGTGTTCCTCATATTGTAGGCATAG
TTTTCCAAGGCATTCTTGGCCTCGACCTTCTTCTTGTGCTCCTCATCTTC
AGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTCAATTTCATCCTTTG
ACAATCTACCCTTGTCGTTGGTGATTGTGATCTTGTTCTTTTGGCCGGTT
GTCTTATCTTCTGCTGAGACATTCAAGATACCGTTAGCA
back to top