DN621641

Overview
NameDN621641
Unique NameDN621641
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_RHOPA (Chaperone protein dnaK OS=Rhodopseudomonas palustris GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 45/131 (34.35%), Postives = 76/131 (58.02%), Query Frame = -2
Query:  296 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 688
            ANGI+NVSA+DK TG++ +I I    G LS  EI+KMV++AE   AED++ ++ V+AKN  +   ++    + +   GSK+D ++++ IEDA+    + L  +   +A+  + K   L      +   MY+
Sbjct:  475 ANGIVNVSAKDKATGKEQQIRI-QASGGLSDSEIDKMVKDAEANAAEDKKRREAVDAKNHADALVHSTEKALAEH--GSKVDESERRSIEDALSDLREALKGD---DAEAIKAKSNTLAQASMKLGEAMYK 599          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_MYCMM (Chaperone protein dnaK OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 41/120 (34.17%), Postives = 70/120 (58.33%), Query Frame = -2
Query:  338 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKI---GSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKE 688
            ANGI++V+A+DK TG++N I I    G LSKDEI++M+++AE + AED + +++ + +N  E   Y     VK+++    GSK+      K++ A+ +A   L    +A      +K+ E
Sbjct:  454 ANGIVHVTAKDKGTGKENTIRIQEGSG-LSKDEIDRMIKDAEAHAAEDHKRREEADVRNQAETLVYQTEKFVKEQREAEGGSKVPEDTLNKVDAAVAEAKSALAGTDIAAIKSAMEKLGE 572          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_METNO (Chaperone protein dnaK OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = -2
Query:  389 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWL 688
            ANGI+NV+A+DK TG++++I I    G LS+ EI++MVQEAE   AED++ ++ VE KN  E+  +    +VK+   G K+  ADK  I  AID   Q L
Sbjct:  475 ANGIVNVTAKDKATGKEHQIRI-QASGGLSETEIQRMVQEAEANAAEDKKRRELVEVKNQGESLIHATEKSVKE--YGDKVSEADKAGITTAIDALRQAL 571          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_LACCB (Chaperone protein dnaK OS=Lactobacillus casei (strain BL23) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 44/130 (33.85%), Postives = 73/130 (56.15%), Query Frame = -2
Query:  296 NGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 685
            NGI+ VSA+D  TG+   ITI +  G LS +EIE+M +EAE+    DE+ K++V+ KN ++   +    T+KD  +  K+   D KK++DA +   +    N L   D+ + K  +L  +   +  K+Y+
Sbjct:  452 NGIVQVSAKDLGTGKSQNITIKSSSG-LSDEEIERMKKEAEENADADEKRKEEVDLKNDVDQLLFQTDKTLKD--VDGKVPEEDIKKVKDAQEALKKAQQENNL---DDMKQKRDDLSKLVQDMTVKLYE 575          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_LACC3 (Chaperone protein dnaK OS=Lactobacillus casei (strain ATCC 334) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 44/130 (33.85%), Postives = 73/130 (56.15%), Query Frame = -2
Query:  296 NGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 685
            NGI+ VSA+D  TG+   ITI +  G LS +EIE+M +EAE+    DE+ K++V+ KN ++   +    T+KD  +  K+   D KK++DA +   +    N L   D+ + K  +L  +   +  K+Y+
Sbjct:  452 NGIVQVSAKDLGTGKSQNITIKSSSG-LSDEEIERMKKEAEENADADEKRKEEVDLKNDVDQLLFQTDKTLKD--VDGKVPEEDIKKVKDAQEALKKAQQENNL---DDMKQKRDDLSKLVQDMTVKLYE 575          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_GRABC (Chaperone protein dnaK OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 42/118 (35.59%), Postives = 70/118 (59.32%), Query Frame = -2
Query:  335 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKEL 688
            ANGI+NVSA+DK TG++ +I I    G LS  +I++MVQEAE     D++ +  VEA+N  E+  + +   +K++  G K+  ADK + E AI      L+ + LA   +  +++ ++
Sbjct:  475 ANGIVNVSAKDKATGKEQQIRI-QASGGLSDADIQRMVQEAEANAEADKQRRALVEARNQAESLVHQVEKNLKEQ--GDKIAEADKGEAESAISATRTALEGDDLAALTQATERLSQV 589          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_EUBE2 (Chaperone protein dnaK OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 42/136 (30.88%), Postives = 80/136 (58.82%), Query Frame = -2
Query:  296 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIE---DAIDQAIQWLDSNQL--AEADEFEDKMKELESICNPIIAKMYQ 688
            ANGI+NVSA+D  TG++  ITIT     +S ++I+K V+EA +++A+D++ K  ++A+N  ++  +  +  +  ++ G KLD +DK  +E   +A+   +   D   +  A+ DE +   ++L      + AK+Y+
Sbjct:  453 ANGIVNVSAKDLGTGKEQHITITAG-SNMSDEDIDKAVKEAAEFEAQDKKRKDAIDARNEADSMVFQTQKAM--DEAGDKLDASDKAAVETDLNALKALVDGSDPENMTDAQVDEIKAAKEKLMESAQKLFAKLYE 585          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_ELUMP (Chaperone protein dnaK OS=Elusimicrobium minutum (strain Pei191) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 45/131 (34.35%), Postives = 73/131 (55.73%), Query Frame = -2
Query:  296 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 688
            ANGILNVSA+D  T ++  ITIT+ K +LS DE++K V+EAEK+  ED++ K++V+AKN  ++  +     +K+   G K+   D+  I+ A+    + L  + +    + +D           II K  Q
Sbjct:  457 ANGILNVSAKDLGTNKQQHITITS-KTKLSDDEVQKFVKEAEKFADEDKKTKERVDAKNEADSVLFQTEKALKEH--GDKVPQEDRLNIDRALGDLKEALKGDDVERIKKAKDDALAASQKLGEIIYKESQ 584          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_CELJU (Chaperone protein dnaK OS=Cellvibrio japonicus (strain Ueda107) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 46/120 (38.33%), Postives = 67/120 (55.83%), Query Frame = -2
Query:  329 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELES 688
            ANGILNVSA+DK TG++  I I    G LS DEI+KMV++AE     D +  + V A+N LE   +  + TVK+   G K    +K  I+ A+ +A + +  + LA  +    K+ E  S
Sbjct:  480 ANGILNVSAKDKATGKEQSIVIKASSG-LSDDEIQKMVKDAEANAEADRKFAELVGARNTLEGLIHATQKTVKE--AGDKATADEKAAIDAAVKEAEEAVKGDDLARIEAATTKLTEASS 596          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_BURTA (Chaperone protein dnaK OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 45/130 (34.62%), Postives = 80/130 (61.54%), Query Frame = -2
Query:  299 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 688
            ANGIL+V A+DK TG++NKITI  + G LS+ EIEKMV++AE   AED + ++  E++N  +   ++ +  + +   G KL+  +K+KIE A+ + ++ +  N  ++    + K++ + +    +  KMY
Sbjct:  481 ANGILHVGAKDKATGKENKITIKANSG-LSEAEIEKMVKDAEANAAEDHKLRELAESRNQGDALVHSTKKALTE--YGDKLEAGEKEKIEAALKE-LEDVLKNASSDKAAIDAKIETVATASQKLGEKMY 606          
The following BLAST results are available for this feature:
BLAST of DN621641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_RHOPA1.139e-1234.35Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_MYCMM1.139e-1234.17Chaperone protein dnaK OS=Mycobacterium marinum (s... [more]
DNAK_METNO1.139e-1245.00Chaperone protein dnaK OS=Methylobacterium nodulan... [more]
DNAK_LACCB1.139e-1233.85Chaperone protein dnaK OS=Lactobacillus casei (str... [more]
DNAK_LACC31.139e-1233.85Chaperone protein dnaK OS=Lactobacillus casei (str... [more]
DNAK_GRABC1.139e-1235.59Chaperone protein dnaK OS=Granulibacter bethesdens... [more]
DNAK_EUBE21.139e-1230.88Chaperone protein dnaK OS=Eubacterium eligens (str... [more]
DNAK_ELUMP1.139e-1234.35Chaperone protein dnaK OS=Elusimicrobium minutum (... [more]
DNAK_CELJU1.139e-1238.33Chaperone protein dnaK OS=Cellvibrio japonicus (st... [more]
DNAK_BURTA1.139e-1234.62Chaperone protein dnaK OS=Burkholderia thailandens... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621641 ID=DN621641; Name=DN621641; organism=Citrus sinensis; type=EST; length=689bp
TTTTTTTTTTTTTTTTAGGGACTGAAAAATATTCATTATATAAATTGGGT
CCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAAGGAAAAATTAATA
TTCATCCTAAGGCTAAAGCAACATAAGATAAAAACCAAACGTCCAGTTTT
CCCACCGTCAAAAAACCGACCTCCCACAAACACAGCAAAATAAACTGGAA
GCTTAGTCAACTTCCTCAATCTTGGGACCGGCGGCACTGCCACCAGCTGG
AGGAGTATCATCATCCATGTCACCGCCCATATCACCACCAGCACCTTGAT
ACATCTTGGCAATGATGGGATTGCAGATGCTCTCAAGCTCCTTCATCTTG
TCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTATCAAGCCATTGAAT
TGCCTGGTCAATGGCATCCTCAATCTTCTTCTTGTCAGCTGGATCAAGTT
TGGAGCCGATCTTCTCGTCCTTGACAGTGTTCCTCATATTGTAGGCATAG
TTTTCCAAGGCATTCTTGGCCTCGACCTTCTTCTTGTGCTCCTCATCTTC
AGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTCAATTTCATCCTTTG
ACAATCTACCCTTGTCGTTGGTGATTGTGATCTTGTTCTTTTGGCCGGTT
GTCTTATCTTCTGCTGAGACATTCAAGATACCGTTAGCA
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