DN621641

Overview
NameDN621641
Unique NameDN621641
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_BRUME (Chaperone protein dnaK OS=Brucella melitensis GN=dnaK PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 47/131 (35.88%), Postives = 76/131 (58.02%), Query Frame = -2
Query:  296 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 688
            ANGI+NVSA+DK TG++++I I    G LS  +IEKMV++AE     D++ ++ VEAKN  E+  ++   ++ +   G K+   DKK IEDAI      L+     +A++ + K + L  +   +   MY+
Sbjct:  475 ANGIVNVSAKDKGTGKEHQIRI-QASGGLSDADIEKMVKDAEANAEADKKRRESVEAKNQAESLVHSTEKSLAE--YGDKVSADDKKAIEDAIAALKTSLEGE---DAEDIKAKTQALAEVSMKLGQAMYE 599          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_BRUAB (Chaperone protein dnaK OS=Brucella abortus GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.139e-12
Identity = 47/131 (35.88%), Postives = 76/131 (58.02%), Query Frame = -2
Query:  296 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 688
            ANGI+NVSA+DK TG++++I I    G LS  +IEKMV++AE     D++ ++ VEAKN  E+  ++   ++ +   G K+   DKK IEDAI      L+     +A++ + K + L  +   +   MY+
Sbjct:  475 ANGIVNVSAKDKGTGKEHQIRI-QASGGLSDADIEKMVKDAEANAEADKKRRESVEAKNQAESLVHSTEKSLAE--YGDKVSADDKKAIEDAIAALKTSLEGE---DAEDIKAKTQALAEVSMKLGQAMYE 599          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_THISH (Chaperone protein dnaK OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 41/130 (31.54%), Postives = 75/130 (57.69%), Query Frame = -2
Query:  299 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 688
            ANGILNVSA+DK TG++  I I    G LS +E+E+MV++AE +  ED+   + V A+N  +N  +    ++K+  +G +++  +K+ IE A+ +  + +  +     DE E + ++L      +  ++Y
Sbjct:  480 ANGILNVSAKDKATGKQQSIVIKASSG-LSDEEVERMVRDAEAHADEDKRFHELVAARNQADNLVHATEKSLKE--LGDQVEAGEKQAIESALSELREAMKGD---NKDEIETRTQKLAEASGKLAERVY 603          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_PELLD (Chaperone protein dnaK OS=Pelodictyon luteolum (strain DSM 273) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 42/132 (31.82%), Postives = 81/132 (61.36%), Query Frame = -2
Query:  296 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWL-DSNQLAEADEFEDKMKELESICNPIIAKMYQ 688
            +NGILNVSA+DK TG++  I I +   +L+  E+EKM ++A+ +  ED++ K+++E KN+ ++  ++    + +  +G K+ PADKK +   I+ A++ L D+++    +  +  M EL  +   + + +YQ
Sbjct:  473 SNGILNVSAKDKATGKEQSIKIESSS-KLTDAEVEKMKEDAKVHAEEDQKRKEEIEVKNSADSLIFSTEKQLSE--LGEKI-PADKKPV---IEGALEKLKDAHKNGTIESIKGAMDELSKVWGEVASNLYQ 597          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_NEIMA (Chaperone protein dnaK OS=Neisseria meningitidis serogroup A GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 42/96 (43.75%), Postives = 65/96 (67.71%), Query Frame = -2
Query:  401 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQA 688
            ANGIL+VSA+DK TG+   ITI    G LS++EIE+MV++AE    ED++  + V ++N  E   ++++ ++ D   G KLD A+K+KIE A+ +A
Sbjct:  481 ANGILHVSAKDKGTGKAANITIQGSSG-LSEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLAD--YGDKLDAAEKEKIEAALKEA 573          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_NEIM0 (Chaperone protein dnaK OS=Neisseria meningitidis serogroup C (strain 053442) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 42/96 (43.75%), Postives = 65/96 (67.71%), Query Frame = -2
Query:  401 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQA 688
            ANGIL+VSA+DK TG+   ITI    G LS++EIE+MV++AE    ED++  + V ++N  E   ++++ ++ D   G KLD A+K+KIE A+ +A
Sbjct:  481 ANGILHVSAKDKGTGKAANITIQGSSG-LSEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLAD--YGDKLDAAEKEKIEAALKEA 573          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_NEIG1 (Chaperone protein dnaK OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 42/96 (43.75%), Postives = 65/96 (67.71%), Query Frame = -2
Query:  401 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQA 688
            ANGIL+VSA+DK TG+   ITI    G LS++EIE+MV++AE    ED++  + V ++N  E   ++++ ++ D   G KLD A+K+KIE A+ +A
Sbjct:  481 ANGILHVSAKDKGTGKAANITIQGSSG-LSEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLAD--YGDKLDAAEKEKIEAALKEA 573          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_METSS (Chaperone protein dnaK OS=Methylovorus sp. (strain SS1 / DSM 11726) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 38/93 (40.86%), Postives = 66/93 (70.97%), Query Frame = -2
Query:  410 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 688
            AN IL+VSA+DK TG++NKITI  + G LS++EI++M ++A  Y  ED + ++ V+A+N+ +   ++++ ++ +   G KL+  +K+KIE AI
Sbjct:  480 ANAILHVSAKDKATGKENKITIKANSG-LSEEEIKRMEEDAAAYADEDRKLRELVDARNSADGMVHSVKKSLSEH--GDKLEAGEKEKIEAAI 569          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_DESAH (Chaperone protein dnaK OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 46/131 (35.11%), Postives = 76/131 (58.02%), Query Frame = -2
Query:  296 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 688
            ANGI++V+A+DK TG++  I IT   G LS++EI+KMV +AE +  ED++  + V+AKN  E+  +    T+K+   G K+D A K  IE A ++  +  +     +A   ++K + L    + +   MYQ
Sbjct:  475 ANGIVHVAAKDKATGKEQSIRITAASG-LSEEEIKKMVNDAELHADEDKKKHELVDAKNTAESLIHQTEKTLKEH--GDKVDAATKTAIEAACEELKKVKEG---TDAAIIKEKSEALTQASHKLAEAMYQ 599          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_BURS3 (Chaperone protein dnaK OS=Burkholderia sp. (strain 383) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 43/130 (33.08%), Postives = 81/130 (62.31%), Query Frame = -2
Query:  299 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 688
            ANGIL+V A+DK TG++NKITI  + G LS+ EI++M+++AE   AED + ++  +++N  +   ++ +  + +   G KLD  +K+ IE ++ ++++ L  +  A+    + K++EL  +   +  KMY
Sbjct:  481 ANGILHVGAKDKATGKENKITIKANSG-LSEAEIDQMIKDAEANAAEDHKLRELADSRNQGDALVHSTKKALTE--YGDKLDAGEKEAIEASL-KSLEELLKDSSADKAAIDAKVEELGKVSQKLGEKMY 606          
The following BLAST results are available for this feature:
BLAST of DN621641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BRUME1.139e-1235.88Chaperone protein dnaK OS=Brucella melitensis GN=d... [more]
DNAK_BRUAB1.139e-1235.88Chaperone protein dnaK OS=Brucella abortus GN=dnaK... [more]
DNAK_THISH1.488e-1231.54Chaperone protein dnaK OS=Thioalkalivibrio sp. (st... [more]
DNAK_PELLD1.488e-1231.82Chaperone protein dnaK OS=Pelodictyon luteolum (st... [more]
DNAK_NEIMA1.488e-1243.75Chaperone protein dnaK OS=Neisseria meningitidis s... [more]
DNAK_NEIM01.488e-1243.75Chaperone protein dnaK OS=Neisseria meningitidis s... [more]
DNAK_NEIG11.488e-1243.75Chaperone protein dnaK OS=Neisseria gonorrhoeae (s... [more]
DNAK_METSS1.488e-1240.86Chaperone protein dnaK OS=Methylovorus sp. (strain... [more]
DNAK_DESAH1.488e-1235.11Chaperone protein dnaK OS=Desulfobacterium autotro... [more]
DNAK_BURS31.488e-1233.08Chaperone protein dnaK OS=Burkholderia sp. (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621641 ID=DN621641; Name=DN621641; organism=Citrus sinensis; type=EST; length=689bp
TTTTTTTTTTTTTTTTAGGGACTGAAAAATATTCATTATATAAATTGGGT
CCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAAGGAAAAATTAATA
TTCATCCTAAGGCTAAAGCAACATAAGATAAAAACCAAACGTCCAGTTTT
CCCACCGTCAAAAAACCGACCTCCCACAAACACAGCAAAATAAACTGGAA
GCTTAGTCAACTTCCTCAATCTTGGGACCGGCGGCACTGCCACCAGCTGG
AGGAGTATCATCATCCATGTCACCGCCCATATCACCACCAGCACCTTGAT
ACATCTTGGCAATGATGGGATTGCAGATGCTCTCAAGCTCCTTCATCTTG
TCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTATCAAGCCATTGAAT
TGCCTGGTCAATGGCATCCTCAATCTTCTTCTTGTCAGCTGGATCAAGTT
TGGAGCCGATCTTCTCGTCCTTGACAGTGTTCCTCATATTGTAGGCATAG
TTTTCCAAGGCATTCTTGGCCTCGACCTTCTTCTTGTGCTCCTCATCTTC
AGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTCAATTTCATCCTTTG
ACAATCTACCCTTGTCGTTGGTGATTGTGATCTTGTTCTTTTGGCCGGTT
GTCTTATCTTCTGCTGAGACATTCAAGATACCGTTAGCA
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