DN621641

Overview
NameDN621641
Unique NameDN621641
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_BORAP (Chaperone protein dnaK OS=Borrelia afzelii (strain PKo) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 44/131 (33.59%), Postives = 76/131 (58.02%), Query Frame = -2
Query:  296 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 688
            ANGI++VSA+D  TG++ KI I +  G LS+ EI++MV++AE +  ED++ K+ +EAKN   +  Y    ++K+     K+   DK+ IE+ I +  + L+   ++     + K +EL+     I   MY+
Sbjct:  475 ANGIVHVSAKDMGTGKEQKIRIESSSG-LSESEIDRMVKDAEAHAEEDKKLKENIEAKNTANSLIYQTEKSLKE--YSEKISIEDKETIENKIKELKESLEKEDIS---LIKSKTEELQKASYKIAEMMYK 599          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_BACTN (Chaperone protein dnaK OS=Bacteroides thetaiotaomicron GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 49/131 (37.40%), Postives = 76/131 (58.02%), Query Frame = -2
Query:  299 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWL-DSNQLAEADEFEDKMKELESICNPIIAKMY 688
            ANGIL VSA+DK TG++  I I    G LSK+EIEKM  EAE     D++ ++K++  N  ++  +   N +K+  +G KL PADKK     I+ A+Q L D+++  +    +  M E+ ++     A+MY
Sbjct:  474 ANGILKVSAKDKATGKEQAIRIEASSG-LSKEEIEKMKAEAEANAEADKKEREKIDKLNQADSVIFQTENQLKE--LGDKL-PADKKA---PIEAALQKLKDAHKSQDLAAIDTAMAEINTVFQTASAEMY 597          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_BACSH (Chaperone protein dnaK OS=Bacillus sphaericus GN=dnaK PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12
Identity = 40/130 (30.77%), Postives = 77/130 (59.23%), Query Frame = -2
Query:  296 NGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 685
            NGI++V A+D  T ++  I I +D G LS+ EIE+MV++AE  +  D + K++ + +N  +   + +  T+ D  +G ++   +KK +EDA D+  + L++ +L      ++K   LE +  P++ K+Y+
Sbjct:  451 NGIVSVKAKDLGTNKEQTIVIQSDSG-LSEAEIERMVKDAEANRDADAKRKEEADLRNEADQLVFQVDKTITD--LGEQITEDEKKSVEDARDELKKALEAGELEGIKAAKEK---LEGVLQPLVMKVYE 574          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: HSP7M_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=AN6010 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12
Identity = 44/135 (32.59%), Postives = 78/135 (57.78%), Query Frame = -2
Query:  296 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAE----ADEFEDKMKELESICNPIIAKMYQ 688
            A+ I++V A+DK+T +   ITI +  G LS  EI+ MV++AEKY A+D+E K  +EA N  ++   +    +K+     +LD A+ ++I + I+   +++  NQ  E    A+E + K  EL++    +  KM++
Sbjct:  514 ADSIVHVHAKDKSTNKDQSITIASGSG-LSDAEIQSMVEDAEKYGAQDKERKAAIEAANRADSVLNDTEKALKE--FEDRLDKAEAEQIREKINTLREFVAKNQSGEVAATAEELKQKTDELQTASLTLFDKMHK 645          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_VIBSL (Chaperone protein dnaK OS=Vibrio splendidus (strain LGP32) GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12
Identity = 50/118 (42.37%), Postives = 73/118 (61.86%), Query Frame = -2
Query:  335 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKEL 688
            A+GILNVSA+DK TG++ KITI    G LS++EIE MVQEAE  K  D++ ++ V A+N  +   +  +  V  E+ G  L   +K KIE AI +A++ + S    EA   + K++EL
Sbjct:  479 ADGILNVSAKDKATGKEQKITI-QASGGLSEEEIEAMVQEAEANKEADKKFEELVTARNQADQMIHGTKKQV--EEAGEALPADEKAKIEAAI-EALESVKSGDDKEA--IDAKVQEL 590          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_STACT (Chaperone protein dnaK OS=Staphylococcus carnosus (strain TM300) GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12
Identity = 41/130 (31.54%), Postives = 76/130 (58.46%), Query Frame = -2
Query:  296 NGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 685
            NGI+NV+A+D  T ++  ITI +    LS DEI++MV++AE+   ED++ +++ + +N  ++  + +  T+KD  +G  +   DKK+ ED  +     L+   L   ++ + K +ELE +   +  K+YQ
Sbjct:  451 NGIVNVTAKDLGTNKEQNITIESSSA-LSDDEIDRMVKDAEQNAEEDKKRREESDLRNEADSLVFQVDKTLKD--LGDNVSEDDKKQAEDKKEALKSALEGQDL---EDIKTKKEELEKVVQELSMKVYQ 574          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_RICPR (Chaperone protein dnaK OS=Rickettsia prowazekii GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12
Identity = 46/131 (35.11%), Postives = 76/131 (58.02%), Query Frame = -2
Query:  296 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 688
            ANGI++VSA+DK +G++ K+TI    G LS  EIE+MV++AE    ED++ K+ +E KNA ++  Y+   T+++   G KL   +K  +E+A+      L+S    +A   ++K   L +    I   MY+
Sbjct:  474 ANGIVHVSAKDKASGKEQKVTI-QASGGLSDAEIEQMVKDAEHNADEDKKRKELIETKNAADSLVYSTEKTLRE--YGDKLSSEEKGTVEEALTSLKAALESE---DASLIKEKTGNLTAANMKIGEAMYK 598          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_RALME (Chaperone protein dnaK OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dnaK PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12
Identity = 45/130 (34.62%), Postives = 76/130 (58.46%), Query Frame = -2
Query:  299 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 688
            ANGIL+V A+DK TG++N+ITI  + G LS+DEI++MV++AE    ED+  ++  +A+N  +   ++ R  + +   G KL+  +K+KIE AI       D+ +  +  E + K+  L      +  K+Y
Sbjct:  481 ANGILHVGAKDKATGKENRITIKANSG-LSEDEIQRMVKDAEANAEEDKRARELADARNQADALIHSTRKALGE--YGEKLEAGEKEKIEAAIKDL---EDAARGGDKAEIDAKVNALSEASQKLGEKVY 604          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_POLNA (Chaperone protein dnaK OS=Polaromonas naphthalenivorans (strain CJ2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12
Identity = 49/130 (37.69%), Postives = 77/130 (59.23%), Query Frame = -2
Query:  299 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 688
            ANGIL+V A+DK TG++NKITI  + G L++ EI++MV++AE    +D++  + V+AKN+ E   ++++ ++ +   G KLD  +K KIE AI    + L S+  A     E K   L      +  KMY
Sbjct:  481 ANGILHVGAKDKGTGKENKITIKANSG-LTEAEIQQMVKDAELNAEDDKKKVEFVQAKNSAEAMVHSVKKSLGE--YGDKLDAGEKAKIEAAIKDMEEALKSDDKA---AIEAKNAALMEASQKLGEKMY 604          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_NOCFA (Chaperone protein dnaK OS=Nocardia farcinica GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12
Identity = 40/115 (34.78%), Postives = 70/115 (60.87%), Query Frame = -2
Query:  344 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKM 688
            ANGI++V+A+DK TG++N I I +  G LSK+EI++M+++AE++ AED+  +++ E +N  E   +     +KD +   K+    K K+E AI +A + L    +A      +K+
Sbjct:  454 ANGIVHVTAKDKGTGKENTIKIQDGSG-LSKEEIDRMIKDAEQHAAEDKARREEAETRNQAETLVHQTEKFIKDNE--DKVPADVKSKVEAAIAEANEALAGTDIAAVKAAVEKL 565          
The following BLAST results are available for this feature:
BLAST of DN621641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BORAP1.488e-1233.59Chaperone protein dnaK OS=Borrelia afzelii (strain... [more]
DNAK_BACTN1.488e-1237.40Chaperone protein dnaK OS=Bacteroides thetaiotaomi... [more]
DNAK_BACSH1.488e-1230.77Chaperone protein dnaK OS=Bacillus sphaericus GN=d... [more]
HSP7M_EMENI1.943e-1232.59Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
DNAK_VIBSL1.943e-1242.37Chaperone protein dnaK OS=Vibrio splendidus (strai... [more]
DNAK_STACT1.943e-1231.54Chaperone protein dnaK OS=Staphylococcus carnosus ... [more]
DNAK_RICPR1.943e-1235.11Chaperone protein dnaK OS=Rickettsia prowazekii GN... [more]
DNAK_RALME1.943e-1234.62Chaperone protein dnaK OS=Ralstonia metallidurans ... [more]
DNAK_POLNA1.943e-1237.69Chaperone protein dnaK OS=Polaromonas naphthaleniv... [more]
DNAK_NOCFA1.943e-1234.78Chaperone protein dnaK OS=Nocardia farcinica GN=dn... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06P21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621641 ID=DN621641; Name=DN621641; organism=Citrus sinensis; type=EST; length=689bp
TTTTTTTTTTTTTTTTAGGGACTGAAAAATATTCATTATATAAATTGGGT
CCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAAGGAAAAATTAATA
TTCATCCTAAGGCTAAAGCAACATAAGATAAAAACCAAACGTCCAGTTTT
CCCACCGTCAAAAAACCGACCTCCCACAAACACAGCAAAATAAACTGGAA
GCTTAGTCAACTTCCTCAATCTTGGGACCGGCGGCACTGCCACCAGCTGG
AGGAGTATCATCATCCATGTCACCGCCCATATCACCACCAGCACCTTGAT
ACATCTTGGCAATGATGGGATTGCAGATGCTCTCAAGCTCCTTCATCTTG
TCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTATCAAGCCATTGAAT
TGCCTGGTCAATGGCATCCTCAATCTTCTTCTTGTCAGCTGGATCAAGTT
TGGAGCCGATCTTCTCGTCCTTGACAGTGTTCCTCATATTGTAGGCATAG
TTTTCCAAGGCATTCTTGGCCTCGACCTTCTTCTTGTGCTCCTCATCTTC
AGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTCAATTTCATCCTTTG
ACAATCTACCCTTGTCGTTGGTGATTGTGATCTTGTTCTTTTGGCCGGTT
GTCTTATCTTCTGCTGAGACATTCAAGATACCGTTAGCA
back to top